prot_Ecto-sp13_S_contig18125.5585.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig18125.5585.1
Unique Nameprot_Ecto-sp13_S_contig18125.5585.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length180
Homology
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BLAST of mRNA_Ecto-sp13_S_contig18125.5585.1 vs. uniprot
Match: A0A6H5KWR4_9PHAE (DUF1995 domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KWR4_9PHAE)

HSP 1 Score: 347 bits (890), Expect = 2.630e-118
Identity = 175/179 (97.77%), Postives = 178/179 (99.44%), Query Frame = 0 
Query:    1 MVESVLRGNPAAKEGASIVEQILDESDAVGLMQLQCKEAKDDASVMIFPTTDTLSLQQQVAAGAGSRLVALVNPAWRSPSDFGLFQAGEAEETLSEFDVTYSLQSLVVYGYTLRLLYCYPGPWRLFLIGEGSGKRELLGSWDQSPPTNDQVESAVFDKKGKPNASERVQASAKFFQDSI 179
            MVESVLRGNPAAKEGASIVEQILDESDAVGLMQLQCKEAKDDASVMIFPTTDTLSLQQQVAAGAGSRLVALVNPAWRS SDFGLFQAGEAEETLSEF+VTYSLQSLVVYGYTLRLLYCYPGPWRLFLIGEGSGKRELLGSWD+SPPTNDQVESAVFDKKGKPNASERVQASAKFFQDS+
Sbjct:  162 MVESVLRGNPAAKEGASIVEQILDESDAVGLMQLQCKEAKDDASVMIFPTTDTLSLQQQVAAGAGSRLVALVNPAWRSSSDFGLFQAGEAEETLSEFEVTYSLQSLVVYGYTLRLLYCYPGPWRLFLIGEGSGKRELLGSWDRSPPTNDQVESAVFDKKGKPNASERVQASAKFFQDSL 340
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BLAST of mRNA_Ecto-sp13_S_contig18125.5585.1 vs. uniprot
Match: A0A6V1R6U0_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1R6U0_HETAK)

HSP 1 Score: 120 bits (302), Expect = 6.390e-30
Identity = 60/164 (36.59%), Postives = 101/164 (61.59%), Query Frame = 0 
Query:   18 IVEQILDESDAVGLMQLQCKEAKDDASVMIFPTTDTLSLQQQVAAGAGSRLVALVNPAWRSPSDFGLFQAGEAEETLSEFDVTYSLQSLVVYGYTLRLLYCYPGPWRLFLIGEGSGKRELLGSWDQSP--PTNDQVESAVFDKKGKPNASERVQASAKFFQDSI 179
            I+ Q++D  DAVG++Q Q  + K D   +IFP T+++ + +Q++  AG+RL  LVNP W+  +DFG F   +A++ L  ++ +Y +QSL+VYG ++RLL  YP PW+LF   E +G   L+  + +    P    +E  +  K G+ + +ER+Q S  F +D++
Sbjct:  158 ILSQVIDADDAVGVLQAQSSDPKKDKLAVIFPNTESIKVLKQLSESAGNRLKLLVNPQWKRVADFGFFGQQDAKKFLEPYERSYHIQSLLVYGRSVRLLRRYPDPWQLFSFDEKTGDSTLIHVFQEGKDVPEYKVIEDILDRKYGRMSVAERIQQSTDFIKDTL 321
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig18125.5585.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5KWR4_9PHAE2.630e-11897.77DUF1995 domain-containing protein n=2 Tax=Ectocarp... [more]
A0A6V1R6U0_HETAK6.390e-3036.59Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR018962Domain of unknown function DUF1995PFAMPF09353DUF1995coord: 37..149
e-value: 3.1E-23
score: 82.8
NoneNo IPR availablePANTHERPTHR35509:SF4coord: 13..176
NoneNo IPR availablePANTHERPTHR35509FAMILY NOT NAMEDcoord: 13..176

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig18125contigEcto-sp13_S_contig18125:934..3379 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig18125.5585.1mRNA_Ecto-sp13_S_contig18125.5585.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig18125 115..3500 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig18125.5585.1 ID=prot_Ecto-sp13_S_contig18125.5585.1|Name=mRNA_Ecto-sp13_S_contig18125.5585.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=180bp
MVESVLRGNPAAKEGASIVEQILDESDAVGLMQLQCKEAKDDASVMIFPT
TDTLSLQQQVAAGAGSRLVALVNPAWRSPSDFGLFQAGEAEETLSEFDVT
YSLQSLVVYGYTLRLLYCYPGPWRLFLIGEGSGKRELLGSWDQSPPTNDQ
VESAVFDKKGKPNASERVQASAKFFQDSI*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR018962DUF1995