prot_Ecto-sp13_S_contig18121.5584.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig18121.5584.1
Unique Nameprot_Ecto-sp13_S_contig18121.5584.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length177
Homology
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BLAST of mRNA_Ecto-sp13_S_contig18121.5584.1 vs. uniprot
Match: D7G272_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G272_ECTSI)

HSP 1 Score: 196 bits (497), Expect = 1.780e-58
Identity = 97/107 (90.65%), Postives = 101/107 (94.39%), Query Frame = 0 
Query:   62 MAWKEEDERILFGGRTRYSVIVVELEHHTSNLAREKERVRAFEDSTNTAVVSVQFTNPYPHAPITQGSDAPFFVSHPEGDEKAPVDKKVRVVHLKDIGTHVKPYQQS 168
            MAWKEEDERILFG +TRYSVIVVE+EHHTSNLAREKERVRAFEDSTNTAVVSVQF NP PHAPIT+GS APFFVSHPEGDE+A VDKKVRVVHLKDIGTHVKPYQ S
Sbjct:    1 MAWKEEDERILFGSKTRYSVIVVEVEHHTSNLAREKERVRAFEDSTNTAVVSVQFANPCPHAPITEGSAAPFFVSHPEGDEEAAVDKKVRVVHLKDIGTHVKPYQAS 107
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BLAST of mRNA_Ecto-sp13_S_contig18121.5584.1 vs. uniprot
Match: D7G273_ECTSI (Transmembrane protein 5 n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G273_ECTSI)

HSP 1 Score: 109 bits (272), Expect = 6.310e-25
Identity = 82/173 (47.40%), Postives = 99/173 (57.23%), Query Frame = 0 
Query:    6 WSVFVLWIISL--HWNNAAATSEDPAAAVAAERTPQNVHS-------DRGLRRIDLLELRREHAAMAWKEEDERILFGGRTRYSVIVVELEHHTSNLAREKERVRAFEDSTNTAVVSVQFTNPYPHAPITQGSDAPFFVSHP-EGDEKAPVDKKVRVVHLKDIGTHVKPYQQS 168
            WS  VL I S   HW    A S D   A     + +  +S       DRGL  +D  +L+ EH AMAWKEED  IL+ G+T YSVI+VE  HHTSNL R+KERVRAFED  NT VVS+QF +    A     S  PFFV HP EG     VDK+VR+V+LK+    +   Q S
Sbjct:    8 WSAVVLAITSSSRHW---VAVSCDDDLAPGRRLSSRTRYSRSELRKTDRGL--VDGHKLQLEHNAMAWKEEDPAILYSGKTTYSVIIVERLHHTSNLIRDKERVRAFEDG-NTTVVSMQFADTLLRA--YDDSAPPFFVGHPAEG-----VDKRVRLVYLKEFWNKINDNQAS 167
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig18121.5584.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7G272_ECTSI1.780e-5890.65Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
D7G273_ECTSI6.310e-2547.40Transmembrane protein 5 n=2 Tax=Ectocarpus TaxID=2... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 35..176
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 5..16
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..34
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 17..34
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..4
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..23
score: 0.868

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig18121contigEcto-sp13_S_contig18121:1251..2419 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig18121.5584.1mRNA_Ecto-sp13_S_contig18121.5584.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig18121 761..2575 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig18121.5584.1 ID=prot_Ecto-sp13_S_contig18121.5584.1|Name=mRNA_Ecto-sp13_S_contig18121.5584.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=177bp
MRARLWSVFVLWIISLHWNNAAATSEDPAAAVAAERTPQNVHSDRGLRRI
DLLELRREHAAMAWKEEDERILFGGRTRYSVIVVELEHHTSNLAREKERV
RAFEDSTNTAVVSVQFTNPYPHAPITQGSDAPFFVSHPEGDEKAPVDKKV
RVVHLKDIGTHVKPYQQSGYTEFAPA*
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