mRNA_Ecto-sp13_S_contig1812.5582.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp13_S_contig1812.5582.1
Unique NamemRNA_Ecto-sp13_S_contig1812.5582.1
TypemRNA
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Homology
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BLAST of mRNA_Ecto-sp13_S_contig1812.5582.1 vs. uniprot
Match: A0A6H5K7B9_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5K7B9_9PHAE)

HSP 1 Score: 441 bits (1133), Expect = 2.650e-151
Identity = 230/243 (94.65%), Postives = 234/243 (96.30%), Query Frame = 1 
Query:  244 AVLRGGMLQQKVIDSPSWDVRMKRCEVAKGELNELVMNYLVVEGYRDAAEHFVEESGTDAKVDLTTIEERVAIRKAMMQGNVVQAMKLANDLDPTILDRDRELRFGLLKQRLLELVRRGDADEALTFAAKHLAPEGAQDPAILRQIEEAVTLLAFEDAASSPLSRLLDMEQRHAAAGRLNAAVLQSQQQEKGPWLPDLLRQLVYTQNALSERVEFPRIEGIDGTKEGVGGTRSAGGSSAEGPR 972
            AV  GGMLQQKVIDSPSWDVRMKRCEVAKGELNELVMNYLVVEGYRDAAEHFVEESGTDAKVDLTTIEERVAIRKAMMQGNVV+AMKLANDLDPT+LDRDRELRFGLLKQRLLELVRRGDADEAL+FAA+HLAPEGAQDPAILRQIEEAVTLLAFEDA SSPLS LLDMEQRHAAAGRLNAAVLQSQQQE GPWLPDLLRQLVYTQNALSERVEFPRIEGI GTKEGVGGTRS G  SAEGPR
Sbjct:   14 AVPSGGMLQQKVIDSPSWDVRMKRCEVAKGELNELVMNYLVVEGYRDAAEHFVEESGTDAKVDLTTIEERVAIRKAMMQGNVVEAMKLANDLDPTMLDRDRELRFGLLKQRLLELVRRGDADEALSFAAEHLAPEGAQDPAILRQIEEAVTLLAFEDATSSPLSGLLDMEQRHAAAGRLNAAVLQSQQQETGPWLPDLLRQLVYTQNALSERVEFPRIEGIGGTKEGVGGTRSTGDGSAEGPR 256
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BLAST of mRNA_Ecto-sp13_S_contig1812.5582.1 vs. uniprot
Match: A0A1Y1HP05_KLENI (Uncharacterized protein n=1 Tax=Klebsormidium nitens TaxID=105231 RepID=A0A1Y1HP05_KLENI)

HSP 1 Score: 207 bits (526), Expect = 2.560e-60
Identity = 107/218 (49.08%), Postives = 146/218 (66.97%), Query Frame = 1 
Query:  253 RGGMLQQKVIDSPSWDVRMKRCEVAKGELNELVMNYLVVEGYRDAAEHFVEESGTDAKVDLTTIEERVAIRKAMMQGNVVQAMKLANDLDPTILDRDRELRFGLLKQRLLELVRRGDADEALTFAAKHLAPEGAQDPAILRQIEEAVTLLAFEDAASSPLSRLLDMEQRHAAAGRLNAAVLQSQQQEKGPWLPDLLRQLVYTQNALSERVEFPRIEGI 906
            +G    +KVI    W+ R+   ++ K ++N+LVMNYLV EGY DAAE F  ESG   ++DL+TI +R+ +RKA+  GNV  A++  NDL+P ILD + +L F L +QRL+EL+R G  +EAL FA + LAP G ++   L ++E  V LLAFED A+SP+S LLD+ QR   A  LNAA+L SQ  EK P LP LL+ LV+ QN L E+V +PRI  +
Sbjct:    3 KGESSSKKVIGREDWEKRLSDVKIRKEDMNKLVMNYLVTEGYVDAAEKFQLESGVKPEIDLSTITDRMTVRKAVQSGNVEDALEKVNDLNPEILDTNPQLFFHLQQQRLIELIRSGKVEEALEFAQEELAPRGEENHQFLEELERTVALLAFEDTANSPVSDLLDISQRQKTASELNAAILTSQSHEKDPRLPSLLKMLVWAQNQLDEKVSYPRINDL 220
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BLAST of mRNA_Ecto-sp13_S_contig1812.5582.1 vs. uniprot
Match: A0A1Y1Y6B0_9FUNG (Uncharacterized protein n=2 Tax=Basidiobolus meristosporus CBS 931.73 TaxID=1314790 RepID=A0A1Y1Y6B0_9FUNG)

HSP 1 Score: 204 bits (520), Expect = 1.800e-59
Identity = 102/209 (48.80%), Postives = 145/209 (69.38%), Query Frame = 1 
Query:  271 QKVIDSPSWDVRMKRCEVAKGELNELVMNYLVVEGYRDAAEHFVEESGTDAKVDLTTIEERVAIRKAMMQGNVVQAMKLANDLDPTILDRDRELRFGLLKQRLLELVRRGDADEALTFAAKHLAPEGAQDPAILRQIEEAVTLLAFEDAASSPLSRLLDMEQRHAAAGRLNAAVLQSQQQEKGPWLPDLLRQLVYTQNALSERVEFPRI 897
            ++ I    W  R+ + +V K +LN+LVMNYLV+EGY+DAAE F +E G    +DLT+IE+R+ IR A+  G++ +A++  NDLDP ILD + +L F L +QRL+EL+R+G+ DEAL FA + LAP G ++P +L+++E+ + LLAFED   SP+  LLD   R   A  LNAA+L SQ Q+K P LP LL+ LV+ QN L E+  +PRI
Sbjct:    7 KQAISKEEWSERLDKVQVNKHDLNKLVMNYLVIEGYKDAAEKFSQECGLSPNIDLTSIEDRMNIRNAVHSGDIGEAVERVNDLDPEILDTNPKLFFHLQQQRLIELIRKGNVDEALEFAQEELAPRGEENPEMLQELEQTMALLAFEDLNKSPVGELLDHTHRQKTASELNAAILTSQSQDKDPKLPGLLKMLVWAQNQLDEKTNYPRI 215
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BLAST of mRNA_Ecto-sp13_S_contig1812.5582.1 vs. uniprot
Match: D8QSL2_SELML (Uncharacterized protein n=1 Tax=Selaginella moellendorffii TaxID=88036 RepID=D8QSL2_SELML)

HSP 1 Score: 201 bits (511), Expect = 4.370e-58
Identity = 102/218 (46.79%), Postives = 146/218 (66.97%), Query Frame = 1 
Query:  253 RGGMLQQKVIDSPSWDVRMKRCEVAKGELNELVMNYLVVEGYRDAAEHFVEESGTDAKVDLTTIEERVAIRKAMMQGNVVQAMKLANDLDPTILDRDRELRFGLLKQRLLELVRRGDADEALTFAAKHLAPEGAQDPAILRQIEEAVTLLAFEDAASSPLSRLLDMEQRHAAAGRLNAAVLQSQQQEKGPWLPDLLRQLVYTQNALSERVEFPRIEGI 906
            +G    +K++    W+ ++   ++ K ++N+LVMN+LV EGY DAAE F  ESGT  +VDL +I +R+A+RKA+  GNV  A++  NDL+P ILD + +L F L +QRL+EL+R G  +EAL FA + LAP G ++ + L ++E  V LLAFED ++ P+  LLD  QR   A  LNAA+L SQ  EK P LP LL+ L+++QN L E+V +PRI  I
Sbjct:    3 KGESSSKKIVSREEWERKLAEVKIRKEDMNKLVMNFLVTEGYVDAAEKFQHESGTSPEVDLGSITDRMAVRKAVQCGNVEDAIEKVNDLNPEILDTNPQLFFHLQQQRLIELIRSGKLEEALEFAQEELAPRGEENHSFLEELERTVALLAFEDTSNCPVGDLLDFSQRQKTASELNAAILTSQSHEKDPKLPSLLKMLIWSQNQLDEKVSYPRINDI 220
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BLAST of mRNA_Ecto-sp13_S_contig1812.5582.1 vs. uniprot
Match: A0A058ZTY9_EUCGR (Uncharacterized protein n=9 Tax=Myrtoideae TaxID=1699513 RepID=A0A058ZTY9_EUCGR)

HSP 1 Score: 201 bits (511), Expect = 5.790e-58
Identity = 104/224 (46.43%), Postives = 151/224 (67.41%), Query Frame = 1 
Query:  247 VLRGGMLQQKVIDSPSWDVRMKRCEVAKGELNELVMNYLVVEGYRDAAEHFVEESGTDAKVDLTTIEERVAIRKAMMQGNVVQAMKLANDLDPTILDRDRELRFGLLKQRLLELVRRGDADEALTFAAKHLAPEGAQDPAILRQIEEAVTLLAFEDAASSPLSRLLDMEQRHAAAGRLNAAVLQSQQQEKGPWLPDLLRQLVYTQNALSERVEFPRIEGIDGTK 918
            ++RG    +KVI    W+ R+   ++ K ++N+LVMN+LV EG+ DAAE F +ESGT+  +DL+TI +R+A++KA+  GNV  A++  NDL+P ILD + +L F L +QRL+EL+R G  +EAL FA + LAP G ++ + L ++E  V LLAFED ++ P+  LLDM QR   A  +NAA+L SQ  EK P LP LL+ LV+ QN L E+  +PRI+ +   K
Sbjct:   11 IMRGS--SKKVITKEDWEKRLNDVKIRKEDMNKLVMNFLVTEGFVDAAEKFRKESGTEPDIDLSTITDRMAVKKAVQCGNVEDAIEKVNDLNPEILDTNPQLFFHLQQQRLIELIRNGKVEEALEFAQEELAPRGEENQSFLEELERTVALLAFEDVSNCPVGDLLDMSQRLKTASEVNAAILTSQSHEKDPKLPSLLKMLVWAQNQLDEKAIYPRIKDLSTAK 232
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BLAST of mRNA_Ecto-sp13_S_contig1812.5582.1 vs. uniprot
Match: A0A3Q7FDD0_SOLLC (Uncharacterized protein n=18 Tax=Pentapetalae TaxID=1437201 RepID=A0A3Q7FDD0_SOLLC)

HSP 1 Score: 201 bits (511), Expect = 6.350e-58
Identity = 102/216 (47.22%), Postives = 146/216 (67.59%), Query Frame = 1 
Query:  271 QKVIDSPSWDVRMKRCEVAKGELNELVMNYLVVEGYRDAAEHFVEESGTDAKVDLTTIEERVAIRKAMMQGNVVQAMKLANDLDPTILDRDRELRFGLLKQRLLELVRRGDADEALTFAAKHLAPEGAQDPAILRQIEEAVTLLAFEDAASSPLSRLLDMEQRHAAAGRLNAAVLQSQQQEKGPWLPDLLRQLVYTQNALSERVEFPRIEGIDGTK 918
            +KVI    W+ R+   ++ K ++N+LVMN+LV EGY +AAE F +ESGTD  +DL TI +R+A++KA+  GNV  A++  NDL+P ILD + +L F L +QRL+EL+R G  +EAL FA + LAP G ++ + L ++E+ V LLAFED ++ P+  LLD+ QR   A  +NAA+L SQ  EK P LP LL+ L++ QN L E+  FPRI  +   K
Sbjct:   21 KKVITREDWEKRLNDVKIRKEDMNKLVMNFLVTEGYVEAAEKFRKESGTDPDIDLATITDRMAVKKAVQAGNVEDAIEKVNDLNPEILDTNPQLFFHLQQQRLIELIRNGKIEEALEFAQEELAPRGEENQSFLEELEKTVALLAFEDVSNCPVGELLDVSQRLKTASEVNAAILTSQSHEKDPKLPSLLKMLIWAQNQLGEKAVFPRITDLSTAK 236
[Close]
BLAST of mRNA_Ecto-sp13_S_contig1812.5582.1 vs. uniprot
Match: A0A804L5V2_MUSAM ((wild Malaysian banana) hypothetical protein n=7 Tax=Zingiberales TaxID=4618 RepID=A0A804L5V2_MUSAM)

HSP 1 Score: 200 bits (509), Expect = 7.390e-58
Identity = 102/214 (47.66%), Postives = 144/214 (67.29%), Query Frame = 1 
Query:  265 LQQKVIDSPSWDVRMKRCEVAKGELNELVMNYLVVEGYRDAAEHFVEESGTDAKVDLTTIEERVAIRKAMMQGNVVQAMKLANDLDPTILDRDRELRFGLLKQRLLELVRRGDADEALTFAAKHLAPEGAQDPAILRQIEEAVTLLAFEDAASSPLSRLLDMEQRHAAAGRLNAAVLQSQQQEKGPWLPDLLRQLVYTQNALSERVEFPRIEGI 906
            + +KVI    W+ ++K  +++K ++N+LVMN+LV EGY DAAE F  ESGT+  +DL TI +R+A++KA+  GNV  A++  NDL+PTILD + +L F L +QRL+EL+R G+ +EAL FA + LAP G ++   L ++E  V LLAF+D  + P   LLD+ QR   A  LNAA+L SQ  EK P LP LL+ L+  QN L E+  +PRI  I
Sbjct:    1 MSKKVITREEWERKLKDVKISKKDMNKLVMNFLVTEGYVDAAEKFRIESGTEPDIDLATITDRMAVKKALQSGNVEDAIEKVNDLNPTILDTNPQLYFHLQQQRLIELIRTGNVEEALEFAQEELAPRGEENQNFLEELERTVALLAFDDVKNCPYGELLDVSQRLKTASELNAAILTSQSHEKDPKLPTLLKMLILAQNQLDEKAVYPRINDI 214
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BLAST of mRNA_Ecto-sp13_S_contig1812.5582.1 vs. uniprot
Match: UPI00125E98E1 (protein GID8 homolog n=2 Tax=Ipomoea TaxID=4119 RepID=UPI00125E98E1)

HSP 1 Score: 199 bits (507), Expect = 2.470e-57
Identity = 104/214 (48.60%), Postives = 145/214 (67.76%), Query Frame = 1 
Query:  265 LQQKVIDSPSWDVRMKRCEVAKGELNELVMNYLVVEGYRDAAEHFVEESGTDAKVDLTTIEERVAIRKAMMQGNVVQAMKLANDLDPTILDRDRELRFGLLKQRLLELVRRGDADEALTFAAKHLAPEGAQDPAILRQIEEAVTLLAFEDAASSPLSRLLDMEQRHAAAGRLNAAVLQSQQQEKGPWLPDLLRQLVYTQNALSERVEFPRIEGI 906
            + +KVI    W+ R+K   + K ++N+LVMN+LV EGY +AAE F  ESGT   +DL TI +R+AI++A+ +GNV  A++  NDL+P ILD + +L F L +QRL+EL+R    +EAL FA + LAP G ++   L ++E+ V LLAFED ASSP+  LLD+ QR   A  +NAA+L SQ  EK P LP LL+ L +TQN L E+V +PRI  +
Sbjct:   19 MSKKVITRDDWEKRLKDVNIRKEDMNKLVMNFLVTEGYVEAAEKFRTESGTAPDIDLATITDRMAIKEAVQRGNVEDAIEKVNDLNPEILDTNPQLFFHLQQQRLIELIRNRKVEEALEFAQEELAPRGEENLGFLEELEKTVALLAFEDVASSPVGELLDVSQRLKTASEINAAILTSQSHEKDPKLPVLLKLLTWTQNQLGEKVAYPRINDV 232
[Close]
BLAST of mRNA_Ecto-sp13_S_contig1812.5582.1 vs. uniprot
Match: A0A4S8J2R3_MUSBA (Uncharacterized protein n=1 Tax=Musa balbisiana TaxID=52838 RepID=A0A4S8J2R3_MUSBA)

HSP 1 Score: 201 bits (512), Expect = 2.650e-57
Identity = 102/214 (47.66%), Postives = 145/214 (67.76%), Query Frame = 1 
Query:  265 LQQKVIDSPSWDVRMKRCEVAKGELNELVMNYLVVEGYRDAAEHFVEESGTDAKVDLTTIEERVAIRKAMMQGNVVQAMKLANDLDPTILDRDRELRFGLLKQRLLELVRRGDADEALTFAAKHLAPEGAQDPAILRQIEEAVTLLAFEDAASSPLSRLLDMEQRHAAAGRLNAAVLQSQQQEKGPWLPDLLRQLVYTQNALSERVEFPRIEGI 906
            + +KVI    W+ ++K  +++K ++N+LVMN+LV EGY DAAE F  ESGT+  +DL TI +R+A++KA+  GNV  A++  NDL+PTILD + +L F L +QRL+EL+R G+ +EAL FA + LAP G ++   L ++E  V LLAF+D  + P   LLD+ QR   A  LNAA+L SQ  EK P LP LL+ L++ QN L E+  +PRI  I
Sbjct:    1 MSKKVITREEWERKLKDVKISKKDMNKLVMNFLVTEGYVDAAEKFWIESGTEPDIDLATITDRMAVKKALQSGNVEDAIEKVNDLNPTILDTNPQLYFHLQQQRLIELIRSGNVEEALEFAQEELAPRGEENQNFLEELERTVALLAFDDVKNCPYGELLDVSQRLKTASELNAAILTSQSHEKDPKLPTLLKMLIWAQNQLDEKAVYPRINDI 214
[Close]
BLAST of mRNA_Ecto-sp13_S_contig1812.5582.1 vs. uniprot
Match: A0A833VXS7_9POAL (Glucose-induced degradation protein 8 n=1 Tax=Carex littledalei TaxID=544730 RepID=A0A833VXS7_9POAL)

HSP 1 Score: 199 bits (505), Expect = 2.880e-57
Identity = 102/219 (46.58%), Postives = 143/219 (65.30%), Query Frame = 1 
Query:  262 MLQQKVIDSPSWDVRMKRCEVAKGELNELVMNYLVVEGYRDAAEHFVEESGTDAKVDLTTIEERVAIRKAMMQGNVVQAMKLANDLDPTILDRDRELRFGLLKQRLLELVRRGDADEALTFAAKHLAPEGAQDPAILRQIEEAVTLLAFEDAASSPLSRLLDMEQRHAAAGRLNAAVLQSQQQEKGPWLPDLLRQLVYTQNALSERVEFPRIEGIDGTK 918
            M  +K+I    W+ ++K  ++ K ++N L+MN+LV EGY DAA+ F  ESGT   +DL TI +R+A++ A+  GNV  A++  NDL+P ILD + EL F L +Q+L+EL+R G  +EAL FA + LAP G ++P  L +IE+ V LLAFED  +SP   LLDM QR   A  +NAA+L SQ  EK P LP LL+ L++ QN L E+  +PRI  +   K
Sbjct:    1 MSTRKMIIRDEWERKLKEVKIRKEDMNRLIMNFLVTEGYVDAADKFRLESGTQPDIDLATITDRMAVKMAVQSGNVQDAIEKINDLNPEILDTNPELYFHLQQQKLIELIRMGKIEEALEFAQEELAPRGEENPGFLEEIEKTVALLAFEDVKNSPYGELLDMSQRVKTASEVNAAILTSQSHEKDPKLPSLLKMLIWAQNRLDEKAIYPRINDLSTAK 219
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig1812.5582.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5K7B9_9PHAE2.650e-15194.65Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A1Y1HP05_KLENI2.560e-6049.08Uncharacterized protein n=1 Tax=Klebsormidium nite... [more]
A0A1Y1Y6B0_9FUNG1.800e-5948.80Uncharacterized protein n=2 Tax=Basidiobolus meris... [more]
D8QSL2_SELML4.370e-5846.79Uncharacterized protein n=1 Tax=Selaginella moelle... [more]
A0A058ZTY9_EUCGR5.790e-5846.43Uncharacterized protein n=9 Tax=Myrtoideae TaxID=1... [more]
A0A3Q7FDD0_SOLLC6.350e-5847.22Uncharacterized protein n=18 Tax=Pentapetalae TaxI... [more]
A0A804L5V2_MUSAM7.390e-5847.66(wild Malaysian banana) hypothetical protein n=7 T... [more]
UPI00125E98E12.470e-5748.60protein GID8 homolog n=2 Tax=Ipomoea TaxID=4119 Re... [more]
A0A4S8J2R3_MUSBA2.650e-5747.66Uncharacterized protein n=1 Tax=Musa balbisiana Ta... [more]
A0A833VXS7_9POAL2.880e-5746.58Glucose-induced degradation protein 8 n=1 Tax=Care... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig1812contigEcto-sp13_S_contig1812:4422..8190 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop1
Start1
Seed ortholog score422.9
Seed ortholog evalue1e-115
Seed eggNOG ortholog2880.D7G2A7
Preferred nameGID8
Model size1496
Hectar predicted targeting categoryother localisation
GOsGO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005737,GO:0006109,GO:0006111,GO:0006508,GO:0006511,GO:0006807,GO:0007089,GO:0007346,GO:0008150,GO:0008152,GO:0009056,GO:0009057,GO:0009889,GO:0009890,GO:0009892,GO:0009987,GO:0010498,GO:0010564,GO:0010675,GO:0010677,GO:0010906,GO:0019222,GO:0019538,GO:0019941,GO:0030054,GO:0030163,GO:0031323,GO:0031324,GO:0031326,GO:0031327,GO:0031974,GO:0031981,GO:0032991,GO:0034657,GO:0043161,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043233,GO:0043255,GO:0043632,GO:0044237,GO:0044238,GO:0044248,GO:0044257,GO:0044260,GO:0044265,GO:0044267,GO:0044422,GO:0044424,GO:0044428,GO:0044446,GO:0044464,GO:0045721,GO:0045787,GO:0045912,GO:0045931,GO:0048518,GO:0048519,GO:0048522,GO:0048523,GO:0050789,GO:0050794,GO:0051603,GO:0051726,GO:0062012,GO:0062014,GO:0065007,GO:0070013,GO:0071704,GO:0080090,GO:0090068,GO:1900087,GO:1901564,GO:1901565,GO:1901575,GO:1901987,GO:1901989,GO:1901990,GO:1901992,GO:1902806,GO:1902808,GO:2000045
Exons6
EggNOG free text desc.negative regulation of gluconeogenesis
EggNOG OGsKOG2659@1,KOG2659@2759
Ec32 ortholog descriptionLisH dimerisation motif, subgroup
Ec32 orthologEc-16_001850.1
Cds size771
COG Functional cat.L
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig1812.5582.1prot_Ecto-sp13_S_contig1812.5582.1Ectocarpus species13 EcNAP12_S_4_19mpolypeptideEcto-sp13_S_contig1812 4943..7986 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681462935.4908175-UTR-Ecto-sp13_S_contig1812:4421..49421681462935.4908175-UTR-Ecto-sp13_S_contig1812:4421..4942Ectocarpus species13 EcNAP12_S_4_19mUTREcto-sp13_S_contig1812 4422..4942 -
1681462935.5770967-UTR-Ecto-sp13_S_contig1812:7986..81901681462935.5770967-UTR-Ecto-sp13_S_contig1812:7986..8190Ectocarpus species13 EcNAP12_S_4_19mUTREcto-sp13_S_contig1812 7987..8190 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681462935.5076292-CDS-Ecto-sp13_S_contig1812:4942..50561681462935.5076292-CDS-Ecto-sp13_S_contig1812:4942..5056Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig1812 4943..5056 -
1681462935.5199199-CDS-Ecto-sp13_S_contig1812:5194..53441681462935.5199199-CDS-Ecto-sp13_S_contig1812:5194..5344Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig1812 5195..5344 -
1681462935.530473-CDS-Ecto-sp13_S_contig1812:5605..57711681462935.530473-CDS-Ecto-sp13_S_contig1812:5605..5771Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig1812 5606..5771 -
1681462935.5407922-CDS-Ecto-sp13_S_contig1812:5964..60411681462935.5407922-CDS-Ecto-sp13_S_contig1812:5964..6041Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig1812 5965..6041 -
1681462935.5497818-CDS-Ecto-sp13_S_contig1812:6426..65491681462935.5497818-CDS-Ecto-sp13_S_contig1812:6426..6549Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig1812 6427..6549 -
1681462935.5613952-CDS-Ecto-sp13_S_contig1812:7845..79861681462935.5613952-CDS-Ecto-sp13_S_contig1812:7845..7986Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig1812 7846..7986 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp13_S_contig1812.5582.1

>prot_Ecto-sp13_S_contig1812.5582.1 ID=prot_Ecto-sp13_S_contig1812.5582.1|Name=mRNA_Ecto-sp13_S_contig1812.5582.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=257bp
MSSNGAGSRGGSSAVLRGGMLQQKVIDSPSWDVRMKRCEVAKGELNELVM
NYLVVEGYRDAAEHFVEESGTDAKVDLTTIEERVAIRKAMMQGNVVQAMK
LANDLDPTILDRDRELRFGLLKQRLLELVRRGDADEALTFAAKHLAPEGA
QDPAILRQIEEAVTLLAFEDAASSPLSRLLDMEQRHAAAGRLNAAVLQSQ
QQEKGPWLPDLLRQLVYTQNALSERVEFPRIEGIDGTKEGVGGTRSAGGS
SAEGPR*
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mRNA from alignment at Ecto-sp13_S_contig1812:4422..8190-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp13_S_contig1812.5582.1 ID=mRNA_Ecto-sp13_S_contig1812.5582.1|Name=mRNA_Ecto-sp13_S_contig1812.5582.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=3769bp|location=Sequence derived from alignment at Ecto-sp13_S_contig1812:4422..8190- (Ectocarpus species13 EcNAP12_S_4_19m)
CCCCCATAGGCACGGTTACACCGCACCAAGCAGTACAACTATCACTCTGT
TTCCTCTGCTTGACCAACTTGAAAGGACGGCCCACGTGCGTACTCACACC
ATCTCTCCCTCGACGTCCAGTTATTGATTCGGGTCGCCGTGCCTCGCGAC
CCAAAATCCCTCATAATTTTTAGCAGCGGCAGCAGCAGTTCTGGTGGAGA
ATTCATGAGCTCAAACGGGGCAGGGTCTCGGGGAGGCTCATCCGCAGTGC
TACGCGGTGGCATGCTACAGCAAAAGGTCATCGACTCACCGTCTTGGGAT
GTGCGCATGAAGCGTTGCGAAGTGGCCAAGGGAGAGCTGAACGAGGTACG
TGTGTCGCGTCGTCAACTGGATTTTACACCAGAAGTCGATGCCTGTACAG
CAGAATGCAGCAGCAGACCAAATGGGACACGAGCAGCAGACAAGGCGGAC
TAGCGGATGTACCGAAGTGTAAATCTGGTAGCTTTTTACTTACTTCGTGC
ATCATAGCGGTGTGTTCATCGACGTAGCTGAACTGCCACAAGGTATGTCT
GCGTTACTGCCCGAGACTTGCCTGCGCGAGGCCGCATAGCCTCATTTGGA
GTCCGTGTACTTGCTGGTTAGGTCAACTACAACTTCTCTGCTCGACAGGA
TGATCTCCGTTGTGCACCCATTTACCTTTGATGCGTGGGATTCAGAACGG
ATGTATCGACGAGGGCTCACCTCAACACGCAAACACTATTGTGTTAAGCT
GTGAGTCGGTGCCTGCCAGAATACTCCTGTGGTGCCTGCAACAGCATCAC
AGCGGCCACGCGACGTCGCCAAAGAGTCAACAATTTTCGCCGCGTTCAAG
AAACATGCACACGGGACACGCGGCATTCCCCACGCAGGCGTCTTTCCCTA
CCCTCTCTTACACCATGTATTAATAGTCCAAACAGATGCTTGCTCCTCTT
CTTTAATCCATGTGCACTACCTACATGAGGATACCGAACACCCTGACCTG
TATCAGCTGGTAGTTCCGAGAAGTCCGTCTTCACACAATCCCAACAGGGA
ACACTGCCGGCACACGTGTGATGACGTGTTTCCACAAGACGCCAACACTC
TATTCCATCTTCCAACAATCTTCTGCCCCTTCCGCAACGCACATCATTTC
CGATCAATTTTCCCACCATTTCTGTCCTTGTTAGCTTGTATTGTTATCGA
GGATCAGAAGCTTCGGAGGGCCAGAAAGCGTTTTGAATTCATCACGAATC
GTGTACTCCTAATTTTATTAGTAAACTAACATACGACTTTTCATTCGCAC
AACTTGTACGGTCCAAAAGGTCTTGCAGTGTCCCCGTTCTTGCGAAGAAG
TGCATAGAGAGGGGTGGTTATGCTGTAGGAGGTATCAGTGCCGTCGGCTG
CTACGTGGTCATCGAAGACAGCCTCGACAACCGTCCTGTTGCTGACGACA
GAAATGATTCGGCTTGTTCTCGTGTGCGCAGCGTTCGCCTTTTCCCTCAC
GTTCGTCTCCCCCTTTATCGCGTGACCTGTCTTGCTGTCGGCATCTCTCG
CTCTCGGCGACCCCACCCTCCTGTCTCATCTCAATCGACCACTGCGTGTG
GGACATGTTCCCTCGTGAATTAATTCACTGACGGACGGAAGTTGGTAATG
AACTACCTGGTAGTGGAGGGCTACCGGGATGCCGCGGAGCACTTCGTGGA
AGAGTCCGGAACCGACGCCAAGGTGGACCTCACTACCATTGAGGAAAGGG
TGGCGATAAGGAAGGTGATGCGATATACCAGTATGCCCTTCAACATGAGA
CAGTCTGGACAACATCAGGCAGATGTGTCAACAGCGTGGGCGCCAAGAGA
AATAGGCGTTTTGGTGGCAACGGTGGAGTCAAGTCTAGCATTCGTCGGCA
CAGCAGTGTATCAAAAGACGGCATTGCCCGCGCTCTTAAGCTTATACCCG
CGCGAGGCAAATCCAGTCTCCACTTGTTTAGCAGCTTTCAAGATAGACCG
GCAGGTGGTTTTGTCTATGGTGTATGTACAAGTATGTACCTGTCTGTCTG
TCTTGTCTCCTTGTTACTTGTTGCCAATGTGTCGGCTGTAAGCCTCGCCC
CTAACGACGCCGGCCGCTTCCTCTTGTGTACCGCACCGTAATTCTTAAGG
CGATGATGCAGGGGAACGTCGTGCAAGCCATGAAGCTAGCGAACGACCTG
GACCCTACCATACTGGACAGAGACAGGTGCGTGTCCCTGGATGCCTTTTC
CAGTCTTGGGGGGAGATTTTCCTTGTTCACATGCGAAATAAAGCGCAGGA
CTATCGATGTGTTGCGTAGTGCGTGACACCCGCACACAACTGGGGTTATC
GGGCGCGGGCGTTCCGATCTTTTGCCTTGGTACATAACGCGTGCACCCTC
CCGCGCATTTCCTCCACAGAGAGCTTCGGTTCGGACTGTTGAAACAGCGT
CTTCTCGAGCTAGTGCGGCGAGGAGATGCCGACGAGGCCCTTACCTTCGC
GGCAAAACACCTCGCGCCCGAGGGCGCGCAAGACCCGGCGATTCTGCGGC
AGATTGAGGAGGCGGTCACGCTGCTAGCGTTCGAGGTGTGTTGAAAGATG
GTGGTACTTGCGGTGGTGGTGGTGGTATCAAAGCCTACGCTCTGGCAAGT
GTTCGAAAAAGAAAACGCTTCACTCCTGCTCAGCAGACGTAACGAACGCA
AACAAACGTTGCTTTGCTATTTATAATGCTGCAGGAAATGGGACTTTTCC
AGAACAGTGCAAAGTTCCTGCGTTGCATGGTGAACGACCATTCCCCCTTC
CCCCGGCTCTGCTTCCCTGTGCTGTTCTTTGTGTTGCCCACCTCAGGATG
CGGCTTCGTCTCCGCTATCAAGACTCTTGGACATGGAGCAGCGGCATGCA
GCGGCCGGGCGGCTCAACGCCGCTGTGCTGCAGAGTCAGCAGCAAGAGAA
GGGGCCGTGGTTGCCTGATCTACTCCGACAGCTCGTCTACACACAGGTAC
TTGTGTACTACCAGAATCGATGAAGGGACAAAAATATAAGGCCGCGCGCA
CCTCACGTTCTACACGTGCTTATGTGCATCTAGCCGTCCACTGACGATGG
TTTCCCTCCCCCCCTCTTGCAATATCGCGCGCAGAACGCGCTGTCGGAGA
GGGTGGAGTTCCCGCGAATAGAAGGCATAGACGGGACCAAGGAAGGGGTC
GGGGGGACGCGCAGTGCTGGGGGTAGTTCGGCAGAGGGTCCTCGGTGACG
TGGTACATGCACGTCTCACGACTTTGCGGATAGAACAGAGGTCTTGTATC
CGTTTTCTGTTCGGATGACTCTGCTGCTGCCTGTTTGTTCATTGTTGCGG
TGCAGGATGTGCGGGGGAAGTGCTGCATATTTGTAATACTGAAGGGTGTT
GTACACGGTATGTGCCCATTTTGCGGTTATTTCCATTCCATTTCCTCAGG
GTCGGCAAGGCAACACGCAGGCTTCTGTATGGTGTGATCGACGAAAAGCA
GGCGGTGGCGAGTTTTTCATTTGTAGCGAGAGCCCATAATTTGAAGATGA
CGGGTGAAGGGATTTGTGAGGAAATGGCGAAATGTCCTGGTGTTCACACG
TTTGGAAACTTTGGCGAGCTGCACTTCATACCACAGCGCCATCGTGATGG
GGTTCGTTTAAATTTTCCACCGTCCATGTCACACCTTCTCCCCCTGAGGG
TGTCGAATGCTTTAATACAAGCGCTGCTGAGTAGATGATAATGGAATGCA
CCACAATCTTGTTGGGAGC
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Coding sequence (CDS) from alignment at Ecto-sp13_S_contig1812:4422..8190-

>mRNA_Ecto-sp13_S_contig1812.5582.1 ID=mRNA_Ecto-sp13_S_contig1812.5582.1|Name=mRNA_Ecto-sp13_S_contig1812.5582.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=771bp|location=Sequence derived from alignment at Ecto-sp13_S_contig1812:4422..8190- (Ectocarpus species13 EcNAP12_S_4_19m)
ATGAGCTCAAACGGGGCAGGGTCTCGGGGAGGCTCATCCGCAGTGCTACG
CGGTGGCATGCTACAGCAAAAGGTCATCGACTCACCGTCTTGGGATGTGC
GCATGAAGCGTTGCGAAGTGGCCAAGGGAGAGCTGAACGAGTTGGTAATG
AACTACCTGGTAGTGGAGGGCTACCGGGATGCCGCGGAGCACTTCGTGGA
AGAGTCCGGAACCGACGCCAAGGTGGACCTCACTACCATTGAGGAAAGGG
TGGCGATAAGGAAGGCGATGATGCAGGGGAACGTCGTGCAAGCCATGAAG
CTAGCGAACGACCTGGACCCTACCATACTGGACAGAGACAGAGAGCTTCG
GTTCGGACTGTTGAAACAGCGTCTTCTCGAGCTAGTGCGGCGAGGAGATG
CCGACGAGGCCCTTACCTTCGCGGCAAAACACCTCGCGCCCGAGGGCGCG
CAAGACCCGGCGATTCTGCGGCAGATTGAGGAGGCGGTCACGCTGCTAGC
GTTCGAGGATGCGGCTTCGTCTCCGCTATCAAGACTCTTGGACATGGAGC
AGCGGCATGCAGCGGCCGGGCGGCTCAACGCCGCTGTGCTGCAGAGTCAG
CAGCAAGAGAAGGGGCCGTGGTTGCCTGATCTACTCCGACAGCTCGTCTA
CACACAGAACGCGCTGTCGGAGAGGGTGGAGTTCCCGCGAATAGAAGGCA
TAGACGGGACCAAGGAAGGGGTCGGGGGGACGCGCAGTGCTGGGGGTAGT
TCGGCAGAGGGTCCTCGGTGA
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