prot_Ecto-sp13_S_contig18110.5578.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig18110.5578.1
Unique Nameprot_Ecto-sp13_S_contig18110.5578.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length176
Homology
BLAST of mRNA_Ecto-sp13_S_contig18110.5578.1 vs. uniprot
Match: D8LJX2_ECTSI (Farnesyltransferase, CAAX box, alpha n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LJX2_ECTSI)

HSP 1 Score: 217 bits (553), Expect = 3.020e-67
Identity = 106/109 (97.25%), Postives = 107/109 (98.17%), Query Frame = 0
Query:    1 MDVDDLQVPLRGFEDVTPIPQDDGPDPVVSIAYRHNYTVATDYLRAFQASGETSERALAITRLVLEYNASHYTAWWFRRRCLFALGMDLANELEVAEDIAGDNPKNYQV 109
            MDVDDLQVPLRGFEDVTPIPQDD  DPVVSIAYRHNYTVATDYLRAFQASGETSER+LAITRLVLEYNASHYTAWWFRRRCLFALGMDLANELEVAEDIAGDNPKNYQV
Sbjct:    1 MDVDDLQVPLRGFEDVTPIPQDDSADPVVSIAYRHNYTVATDYLRAFQASGETSERSLAITRLVLEYNASHYTAWWFRRRCLFALGMDLANELEVAEDIAGDNPKNYQV 109          
BLAST of mRNA_Ecto-sp13_S_contig18110.5578.1 vs. uniprot
Match: A0A835YWW6_9STRA (Farnesyltransferase, CAAX box, alpha n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YWW6_9STRA)

HSP 1 Score: 125 bits (314), Expect = 8.100e-32
Identity = 61/103 (59.22%), Postives = 74/103 (71.84%), Query Frame = 0
Query:    7 QVPLRGFEDVTPIPQDDGPDPVVSIAYRHNYTVATDYLRAFQASGETSERALAITRLVLEYNASHYTAWWFRRRCLFALGMDLANELEVAEDIAGDNPKNYQV 109
            Q PL G+EDVTPIPQ +  +PV  IAY  +Y  A DY RA QASGE SERAL +T  +++ N++HYTAW +RRRCLFAL  DLA EL    D+A  NPKNYQ+
Sbjct:    7 QQPLPGWEDVTPIPQAECENPVARIAYASDYETAMDYFRAAQASGELSERALELTADIIDMNSAHYTAWQYRRRCLFALNKDLAEELSYVRDVALSNPKNYQI 109          
BLAST of mRNA_Ecto-sp13_S_contig18110.5578.1 vs. uniprot
Match: A0A7S2X914_9EUKA (Hypothetical protein n=1 Tax=Lotharella oceanica TaxID=641309 RepID=A0A7S2X914_9EUKA)

HSP 1 Score: 114 bits (286), Expect = 1.340e-27
Identity = 59/108 (54.63%), Postives = 73/108 (67.59%), Query Frame = 0
Query:    5 DLQVPLRG---FEDVTPIPQDDGPDPVVSIAYRHNYTVATDYLRAFQASGETSERALAITRLVLEYNASHYTAWWFRRRCLFALGMDLANELEVAEDIAGDNPKNYQV 109
            DL  PL     FED+TPI QDDGP+PVVSIAY  ++    DY RA    GE SERALA+TR V++ N ++YT W FRR CLFALG +L  EL+  + IA  + KNYQ+
Sbjct:   12 DLTFPLSSSALFEDITPIRQDDGPNPVVSIAYSQHFVDVMDYFRAILKKGEHSERALALTREVIKVNPANYTGWLFRRECLFALGANLKEELKFVDQIAAVSSKNYQL 119          
BLAST of mRNA_Ecto-sp13_S_contig18110.5578.1 vs. uniprot
Match: F0YNC8_AURAN (Uncharacterized protein (Fragment) n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YNC8_AURAN)

HSP 1 Score: 105 bits (261), Expect = 6.850e-25
Identity = 55/105 (52.38%), Postives = 69/105 (65.71%), Query Frame = 0
Query:   10 LRGFEDVTPIPQDDGPDPVVSIAYRHNYTVATDYLRAFQASGETSERALAITRLVLEYNASHYTAWWFRRRCLFAL--GMD---LANELEVAEDIAGDNPKNYQV 109
            +  +EDV PI QDDGP+PVV IAY   Y     + RAF ASGE S R L +T  +LE+NA+HYT W  RR+CLFAL  G D   L +E+  + D+A  NPKNYQ+
Sbjct:    2 MAAYEDVVPIAQDDGPNPVVPIAYPAEYARLMGFFRAFLASGERSPRVLDLTADLLEHNAAHYTVWHVRRQCLFALADGGDATVLGDEMAYSSDVASGNPKNYQI 106          
BLAST of mRNA_Ecto-sp13_S_contig18110.5578.1 vs. uniprot
Match: A0A058ZR60_EUCGR (Uncharacterized protein n=2 Tax=Eucalyptus grandis TaxID=71139 RepID=A0A058ZR60_EUCGR)

HSP 1 Score: 101 bits (251), Expect = 1.790e-24
Identity = 52/105 (49.52%), Postives = 68/105 (64.76%), Query Frame = 0
Query:    8 VPLRG---FEDVTPIPQDDGPDPVVSIAYRHNYTVATDYLRAFQASGETSERALAITRLVLEYNASHYTAWWFRRRCLFALGMDLANELEVAEDIAGDNPKNYQV 109
            VPL     F  VTP+PQDDGP PVV+IAYR ++    DY R+  +S E S R+L +T L + +NA++YT W FRR+ L AL  DL  EL+  E +A  N KNYQ+
Sbjct:   16 VPLASQPEFAGVTPLPQDDGPSPVVAIAYRDDFRETMDYFRSLYSSRELSPRSLLLTSLAISFNAANYTVWHFRRQVLEALDADLTEELKFTEGVAKVNAKNYQL 120          
BLAST of mRNA_Ecto-sp13_S_contig18110.5578.1 vs. uniprot
Match: A0A7S1CC56_9STRA (Hypothetical protein n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1CC56_9STRA)

HSP 1 Score: 105 bits (263), Expect = 4.300e-24
Identity = 54/105 (51.43%), Postives = 68/105 (64.76%), Query Frame = 0
Query:    8 VPLRG---FEDVTPIPQDDGPDPVVSIAYRHNYTVATDYLRAFQASGETSERALAITRLVLEYNASHYTAWWFRRRCLFALGMDLANELEVAEDIAGDNPKNYQV 109
            VPLR    + DVTPIPQDDGP+P+  I Y   +T   DY RA   SGE S RA  ++   ++ NA++YTAW FRR+C+ ALG+DLA EL      A + PKNYQV
Sbjct:   38 VPLRDNPMWADVTPIPQDDGPNPITPIMYSPEFTETMDYFRAVLKSGEISPRAFHLSTRAIKCNAANYTAWHFRRKCIDALGLDLATELAFVSAQAAETPKNYQV 142          
BLAST of mRNA_Ecto-sp13_S_contig18110.5578.1 vs. uniprot
Match: X6LJG1_RETFI (Uncharacterized protein (Fragment) n=1 Tax=Reticulomyxa filosa TaxID=46433 RepID=X6LJG1_RETFI)

HSP 1 Score: 100 bits (250), Expect = 4.900e-23
Identity = 51/98 (52.04%), Postives = 64/98 (65.31%), Query Frame = 0
Query:   13 FEDVTPIPQDDGPDPVVSIAYRHNYTVATDYLRAFQASGETSERALAITRLVLEYNASHYTAWWFRRRCLFALG-MDLANELEVAEDIAGDNPKNYQV 109
            + DVTPIPQDDGP PVV+I Y H +    DY RA  A  E SERALA+   V+E NA +YTAW +RR+ LF L  ++L  EL+    +A   PKNYQ+
Sbjct:   10 YADVTPIPQDDGPSPVVAIRYNHEFRETMDYFRALIAKNEISERALAVVDKVIELNAPNYTAWQYRRKLLFGLPKINLYQELDYVSKVALSTPKNYQL 107          
BLAST of mRNA_Ecto-sp13_S_contig18110.5578.1 vs. uniprot
Match: A0A8H7VCP4_9FUNG (Uncharacterized protein n=1 Tax=Mucor plumbeus TaxID=97098 RepID=A0A8H7VCP4_9FUNG)

HSP 1 Score: 101 bits (252), Expect = 8.820e-23
Identity = 47/97 (48.45%), Postives = 66/97 (68.04%), Query Frame = 0
Query:   13 FEDVTPIPQDDGPDPVVSIAYRHNYTVATDYLRAFQASGETSERALAITRLVLEYNASHYTAWWFRRRCLFALGMDLANELEVAEDIAGDNPKNYQV 109
            ++D+TPIPQDDGP+P+V IAY   Y  A DY RA   + E S+R L + + V++ N +HYT W +R++ LF+L  DL  EL+  ++IA D  KNYQV
Sbjct:   12 WKDITPIPQDDGPNPLVPIAYSREYADAMDYFRAVTRANEKSQRVLTLIQDVIDMNPAHYTVWNYRQQVLFSLNADLNQELDYIDEIAADQAKNYQV 108          
BLAST of mRNA_Ecto-sp13_S_contig18110.5578.1 vs. uniprot
Match: A0A6P5RNS9_PRUAV (protein farnesyltransferase/geranylgeranyltransferase type-1 subunit alpha-like n=1 Tax=Prunus avium TaxID=42229 RepID=A0A6P5RNS9_PRUAV)

HSP 1 Score: 96.7 bits (239), Expect = 9.400e-23
Identity = 53/114 (46.49%), Postives = 69/114 (60.53%), Query Frame = 0
Query:    1 MDVDDLQ--VPLRG---FEDVTPIPQDDGPDPVVSIAYRHNYTVATDYLRAFQASGETSERALAITRLVLEYNASHYTAWWFRRRCLFALGMDLANELEVAEDIAGDNPKNYQV 109
            MD D+ Q  VP +    + DV P+ QDDGP+PVV IAY+  +T   +Y RA   + E S RAL +T   ++ N+ +YT W FRR  L  L  DL NEL+  EDIA  N KNYQ+
Sbjct:    1 MDSDEEQEWVPFKNRPEWSDVVPVEQDDGPNPVVPIAYKEEFTETMNYFRALYRADERSPRALQLTTEAIKLNSGNYTVWHFRRLILKTLSADLQNELDFTEDIAKANSKNYQL 114          
BLAST of mRNA_Ecto-sp13_S_contig18110.5578.1 vs. uniprot
Match: UPI00158A1021 (protein farnesyltransferase/geranylgeranyltransferase type-1 subunit alpha n=1 Tax=Chelonus insularis TaxID=460826 RepID=UPI00158A1021)

HSP 1 Score: 100 bits (249), Expect = 3.280e-22
Identity = 50/97 (51.55%), Postives = 63/97 (64.95%), Query Frame = 0
Query:   13 FEDVTPIPQDDGPDPVVSIAYRHNYTVATDYLRAFQASGETSERALAITRLVLEYNASHYTAWWFRRRCLFALGMDLANELEVAEDIAGDNPKNYQV 109
            ++DVTP+PQDDGP P+V+IAY   +  + DY RA   SGE SERALA+T   L  N ++YT W +RR  L  L  DL  EL   + I GDN KNYQ+
Sbjct:   23 WKDVTPVPQDDGPYPIVAIAYSDKFRDSYDYFRAVLKSGEKSERALALTATCLSLNPANYTVWQYRRDILKELNKDLYEELAYIDSIIGDNTKNYQI 119          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig18110.5578.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LJX2_ECTSI3.020e-6797.25Farnesyltransferase, CAAX box, alpha n=2 Tax=Ectoc... [more]
A0A835YWW6_9STRA8.100e-3259.22Farnesyltransferase, CAAX box, alpha n=1 Tax=Tribo... [more]
A0A7S2X914_9EUKA1.340e-2754.63Hypothetical protein n=1 Tax=Lotharella oceanica T... [more]
F0YNC8_AURAN6.850e-2552.38Uncharacterized protein (Fragment) n=1 Tax=Aureoco... [more]
A0A058ZR60_EUCGR1.790e-2449.52Uncharacterized protein n=2 Tax=Eucalyptus grandis... [more]
A0A7S1CC56_9STRA4.300e-2451.43Hypothetical protein n=1 Tax=Bicosoecida sp. CB-20... [more]
X6LJG1_RETFI4.900e-2352.04Uncharacterized protein (Fragment) n=1 Tax=Reticul... [more]
A0A8H7VCP4_9FUNG8.820e-2348.45Uncharacterized protein n=1 Tax=Mucor plumbeus Tax... [more]
A0A6P5RNS9_PRUAV9.400e-2346.49protein farnesyltransferase/geranylgeranyltransfer... [more]
UPI00158A10213.280e-2251.55protein farnesyltransferase/geranylgeranyltransfer... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D1.25.40.120coord: 10..173
e-value: 2.1E-59
score: 203.2
NoneNo IPR availablePANTHERPTHR11129:SF1PROTEIN FARNESYLTRANSFERASE/GERANYLGERANYLTRANSFERASE TYPE-1 SUBUNIT ALPHAcoord: 13..155
NoneNo IPR availablePANTHERPTHR11129PROTEIN FARNESYLTRANSFERASE ALPHA SUBUNIT/RAB GERANYLGERANYL TRANSFERASE ALPHA SUBUNITcoord: 13..155
NoneNo IPR availableSUPERFAMILY48439Protein prenylyltransferasecoord: 11..154
IPR002088Protein prenyltransferase, alpha subunitPFAMPF01239PPTAcoord: 126..152
e-value: 1.0E-11
score: 44.2
coord: 92..119
e-value: 1.9E-8
score: 33.7
IPR002088Protein prenyltransferase, alpha subunitPROSITEPS51147PFTAcoord: 88..121
score: 13.886
IPR002088Protein prenyltransferase, alpha subunitPROSITEPS51147PFTAcoord: 122..156
score: 16.586
IPR002088Protein prenyltransferase, alpha subunitPROSITEPS51147PFTAcoord: 53..87
score: 10.806

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig18110contigEcto-sp13_S_contig18110:911..3538 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig18110.5578.1mRNA_Ecto-sp13_S_contig18110.5578.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig18110 121..3538 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig18110.5578.1 ID=prot_Ecto-sp13_S_contig18110.5578.1|Name=mRNA_Ecto-sp13_S_contig18110.5578.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=176bp
MDVDDLQVPLRGFEDVTPIPQDDGPDPVVSIAYRHNYTVATDYLRAFQAS
GETSERALAITRLVLEYNASHYTAWWFRRRCLFALGMDLANELEVAEDIA
GDNPKNYQVWYHRRALAEHRGDPGDELAYVDQVVEEDPKNYHAWSHRQWL
LQACLLLIKSTTASLSSGEEAIRLG*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002088Prenyl_trans_a