mRNA_Ecto-sp13_S_contig18109.5576.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp13_S_contig18109.5576.1
Unique NamemRNA_Ecto-sp13_S_contig18109.5576.1
TypemRNA
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Homology
BLAST of mRNA_Ecto-sp13_S_contig18109.5576.1 vs. uniprot
Match: D8LF38_ECTSI (Divalent metal transporter n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LF38_ECTSI)

HSP 1 Score: 750 bits (1937), Expect = 6.810e-269
Identity = 393/422 (93.13%), Postives = 399/422 (94.55%), Query Frame = 1
Query:    1 KLEALFVLLVSIMTVAFFIDFFLSPPSPADVAEGFSFTAESYATVPALGLIGAVIMPHNIYLHSALVLSRVVDRTRPRKLWEATKYYTIDSGIALMVAFMINLAVVCTFAKQFYDETCATASEPSACFVGDSIDPTQPSYGSCDADGTGLCQEIGLSAAAAALRGTLGSSAKYVWAIGLLAAGQSSTMTGTYAGQFVMEGFLQLKIPKWQRVLLTRIIALGPALGVTVFMGGDIRATDRLSAWLNVLQSLQLPFAIIPLLTFCNSPHVMGEFTITSSMTVFVWMVSIGIIGINISIVLGFLFDEGISSEGAAAPWLYACTAIGASLYLGFILFLMREDLQKLRRRAESLFWELGRHDNVGFYALNDNCHPRDGGGRPEMLRSTSDDGSLSPLEPGAGSEARHEQIQGAAVGDERRNGDDTRA 1266
            KLEALFV+LVSIMTVAFFIDFF+SPPSPADVAEGFSFTAESYATVPALGLIGAVIMPHNIYLHSALVLSRVVDRTRPRKLWEATKYYTIDSGIALMVAFMINLAVVCTFAKQFYDETCATASEPSACFVGDSIDPTQPSYGSCDADGTGLCQEIGLSAAAAALRGTLGSSAKYVWA+GLLAAGQSSTMTGTYAGQFVMEGFLQLKIPKWQRVL+TRIIALGPAL VTVFMGGDIRATDRLSAWLNVLQSLQLPFAIIPLLTFCNSPHVMGEFTITSSMT FVWMVSIGIIGINISIVLGFLFDEGISSEGAAAPWLYACTAIGASLYLGFILFLMREDLQKLRRRAESLFWELGRHD+                    MLRSTSDDGSLSPLEPGAGSEARH QIQGAAVGDERR+GDDTRA
Sbjct:  227 KLEALFVVLVSIMTVAFFIDFFMSPPSPADVAEGFSFTAESYATVPALGLIGAVIMPHNIYLHSALVLSRVVDRTRPRKLWEATKYYTIDSGIALMVAFMINLAVVCTFAKQFYDETCATASEPSACFVGDSIDPTQPSYGSCDADGTGLCQEIGLSAAAAALRGTLGSSAKYVWAVGLLAAGQSSTMTGTYAGQFVMEGFLQLKIPKWQRVLVTRIIALGPALAVTVFMGGDIRATDRLSAWLNVLQSLQLPFAIIPLLTFCNSPHVMGEFTITSSMTAFVWMVSIGIIGINISIVLGFLFDEGISSEGAAAPWLYACTAIGASLYLGFILFLMREDLQKLRRRAESLFWELGRHDH--------------------MLRSTSDDGSLSPLEPGAGSEARHGQIQGAAVGDERRDGDDTRA 628          
BLAST of mRNA_Ecto-sp13_S_contig18109.5576.1 vs. uniprot
Match: A0A835YZC9_9STRA (Divalent metal transporter n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YZC9_9STRA)

HSP 1 Score: 383 bits (983), Expect = 1.580e-124
Identity = 210/344 (61.05%), Postives = 251/344 (72.97%), Query Frame = 1
Query:    1 KLEALFVLLVSIMTVAFFIDFFLSPPSPADVAEGFSFTAESYATVPALGLIGAVIMPHNIYLHSALVLSRVVDRTRPRKLWEATKYYTIDSGIALMVAFMINLAVVCTFAKQFYDETCATASEPSACFVGDSIDPTQPSYGSCDADGTGLCQEIGLSAAAAALRGTLGSSAKYVWAIGLLAAGQSSTMTGTYAGQFVMEGFLQLKIPKWQRVLLTRIIALGPALGVTVFMGGDIRATDRLSAWLNVLQSLQLPFAIIPLLTFCNSPHVMGEFTITSSMTVFVWMVSIGIIGINISIVLGFLFDEGISSEGAAAPWLYACTAIGASLYLGFILFLMREDLQKLRR 1032
            KLE LFV+LV+ MTV FFI++   PP+  +V +GF     S+ +V ALGL+GAVIMPHN+YLHSALVLSR + R   RK+WEA KY TIDS +AL +AF+INLAVV TFA QFY   C     P+AC    SID   P++G+C A G G+CQEIGL  A  ALRG+LGS+AKYVWAIGLLAAGQSSTMTGTYAGQFVMEGFLQL I +WQRV+LTR IALGPAL VTV M G   ATDRLS WLNVLQS+QLPFA+IPL+ FC S  +MGEFT+  SMT  +W+++IG+IGIN+  VL F FD+    E            +G +LYL F L+LM EDL +L R
Sbjct:  175 KLEGLFVVLVATMTVTFFINYASEPPAAIEVLKGFQPKITSHTSVTALGLLGAVIMPHNLYLHSALVLSRRIGRDNKRKVWEAVKYCTIDSALALGLAFLINLAVVGTFAVQFYSVDCINTRMPTACLTLGSIDRDSPTFGTC-AKGLGVCQEIGLGHAGDALRGSLGSNAKYVWAIGLLAAGQSSTMTGTYAGQFVMEGFLQLSIAQWQRVMLTRTIALGPALLVTVLMHGKGTATDRLSEWLNVLQSVQLPFALIPLVHFCGSKRLMGEFTVGRSMTALLWVLTIGMIGINLYTVLDFFFDDDAPKESTTISSRIMIFTVG-TLYLSFCLYLMWEDLLRLGR 516          
BLAST of mRNA_Ecto-sp13_S_contig18109.5576.1 vs. uniprot
Match: A0A4D9D1G8_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9D1G8_9STRA)

HSP 1 Score: 297 bits (760), Expect = 1.670e-92
Identity = 171/342 (50.00%), Postives = 222/342 (64.91%), Query Frame = 1
Query:    1 KLEALFVLLVSIMTVAFFIDFFLSPPSPADVAEGFSFTAESYATVPALGLIGAVIMPHNIYLHSALVLSRVVDRTRPRKLWEATKYYTIDSGIALMVAFMINLAVVCTFAKQFYDETCATA-SEPSACFVGDSIDPTQPSYGSCDADGTGLCQEIGLSAAAAALRGTLGSSAKYVWAIGLLAAGQSSTMTGTYAGQFVMEGFLQLKIPKWQRVLLTRIIALGPALGVTVFMGGDIRATDRLSAWLNVLQSLQLPFAIIPLLTFCNSPHVMGEFTITSSMTVFVWMVSIGIIGINISIVLGFLFDEGISSEGAAAPW-LYACTAIGASLYLGFILFLMREDLQ 1020
            KLE++FVLLV+IMTV FFI+F  SPP   D+AEGF      YA + A+GLIGAVIMPHNIYLHSALVLSR VDR RP  + EA KY+ IDS IAL V+F+INLAVV  FA  F+D  CATA   P AC        ++   G CD      CQ IGL+ A  AL   LG SAKY+WA+GLLAAGQ+STMTGTYAGQ+VMEGFL L+IP W RV  TR +A+GP L V +    +   +DR    +NV  S+ L F+++P+L F +S  +MGE   +  +T+ +W+++ G++ INI +V        +   GA  PW +Y  T +   +YL F   L++ED++
Sbjct:  125 KLESVFVLLVAIMTVCFFINFGKSPPPSRDIAEGFVPQIRPYAVLSAVGLIGAVIMPHNIYLHSALVLSRKVDRRRPAHVKEANKYFAIDSAIALTVSFVINLAVVSVFAYHFFDHGCATAPGGPLACL-------SRTEEGVCD------CQLIGLAGAHDALAEALGKSAKYIWAVGLLAAGQASTMTGTYAGQYVMEGFLDLQIPLWARVTFTRFVAIGPGLVVAILTENNQNLSDRFQEAINVFNSVLLSFSLLPVLHFTSSSVIMGEHVSSLPLTITIWVLAFGVLAINIYLV--------VLRIGAGQPWWVYVVTTVVGVIYLAFSYSLVQEDIE 445          
BLAST of mRNA_Ecto-sp13_S_contig18109.5576.1 vs. uniprot
Match: W7TP25_9STRA (2-isopropylmalate synthase n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TP25_9STRA)

HSP 1 Score: 298 bits (764), Expect = 5.960e-87
Identity = 172/342 (50.29%), Postives = 223/342 (65.20%), Query Frame = 1
Query:    1 KLEALFVLLVSIMTVAFFIDFFLSPPSPADVAEGFSFTAESYATVPALGLIGAVIMPHNIYLHSALVLSRVVDRTRPRKLWEATKYYTIDSGIALMVAFMINLAVVCTFAKQFYDETCATA-SEPSACFVGDSIDPTQPSYGSCDADGTGLCQEIGLSAAAAALRGTLGSSAKYVWAIGLLAAGQSSTMTGTYAGQFVMEGFLQLKIPKWQRVLLTRIIALGPALGVTVFMGGDIRATDRLSAWLNVLQSLQLPFAIIPLLTFCNSPHVMGEFTITSSMTVFVWMVSIGIIGINISIVLGFLFDEGISSEGAAAPW-LYACTAIGASLYLGFILFLMREDLQ 1020
            KLE++FVLLV+IMTV FFI+F  SPP   D+AEGF      YA + A+GLIGAVIMPHNIYLHSALVLSR VDR RP  + EA KY+ IDS IAL V+F+INLAVV  FA  F+D  CATA   P AC        ++   G CD      CQ IGL+ A  AL   LG SAKY+WA+GLLAAGQ+STMTGTYAGQ+VMEGFL L+IP W RV  TR +A+GP L V +    +   +DR    +NV  S+ L F+++P+L F +S  +MGE   +  +T+ +W+++ G++ INI +V        +   GA  PW +Y  TA+   +YL F   L++ED++
Sbjct: 1032 KLESVFVLLVAIMTVCFFINFGKSPPPSRDIAEGFVPQIRPYAVLSAVGLIGAVIMPHNIYLHSALVLSRKVDRRRPAHVKEANKYFAIDSAIALTVSFVINLAVVSVFAYHFFDHGCATAPGGPLACL-------SRTEEGVCD------CQLIGLAGAHDALAEALGKSAKYIWAVGLLAAGQASTMTGTYAGQYVMEGFLDLQIPLWARVTFTRFVAIGPGLVVAILTENNQNLSDRFQEAINVFNSVLLSFSLLPVLHFTSSSVIMGEHVSSLPLTITIWVLAFGVLAINIYLV--------VLRIGAGQPWWVYVVTAVVGLIYLAFSYSLVQEDIE 1352          
BLAST of mRNA_Ecto-sp13_S_contig18109.5576.1 vs. uniprot
Match: A0A7S2Y3E1_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2Y3E1_9STRA)

HSP 1 Score: 274 bits (701), Expect = 7.910e-83
Identity = 159/365 (43.56%), Postives = 222/365 (60.82%), Query Frame = 1
Query:    4 LEALFVLLVSIMTVAFFIDFFLSPPSPADVAEGFSFTAESYATVPALGLIGAVIMPHNIYLHSALVLSRVVDRTRPRKLWEATKYYTIDSGIALMVAFMINLAVVCTFAKQFYDETCATASEPSACFVGDSIDPTQPS------YGSCDADGTGLCQEIGLSAAAAALRGTLGSSAKYVWAIGLLAAGQSSTMTGTYAGQFVMEGFLQLKIPKWQRVLLTRIIALGPALGVTVFMGGDIRATDRLSAWLNVLQSLQLPFAIIPLLTFCNSPHVMGEFTITSSMTV-FVWMVSIGIIGINISIVLGFLFDEGISSEGAAAPWLYACTAIGASLYLGFILFLMREDLQKLRRRAESLFWELGRHDNV 1077
            LE  F+ LV ++TV F +++F+  P   +VAEGF    + YA V A+GL G+ +MPHN++LHSALVL+R +DR  PRK+ EA KY +IDSG+A+ V F+IN+ V+ +FA  FYD  CA A  PSAC    +      S       G CD  G G+CQEIGLS A  ALR +LG +AK +WAIGLLA+GQS+TM G YAGQFVM+GFL +K+P W R L+TR +AL P+L V     G +  +D++  WLNVLQS+QLPFA++ L+     P +MGE  +    T+ FVW   + ++  N    + + F+       + AP L A   + + LY  F + L    ++ +   A SL  E G   ++
Sbjct:  218 LEGFFISLVGMITVCFAVNYFIEAPPVEEVAEGFIPDMQGYAMVYAVGLFGSTVMPHNLFLHSALVLTRDIDRNDPRKIREANKYLSIDSGMAVFVTFLINITVIGSFAYNFYDPECAHAEVPSACVSNTAFHNEDASAQGIQVLGVCDG-GQGVCQEIGLSMAGEALRESLGGNAKTLWAIGLLASGQSATMAGAYAGQFVMQGFLDMKVPTWSRALITRSVALLPSLVVAFLCEGQMMVSDQMQEWLNVLQSVQLPFALLALIYIVGDPKIMGEEHVAGPKTLAFVWTCLVLLMVANFY-TIAYQFEGPDLEYLSNAPLLIASLVVFSVLYFTFFIVLTLYSVKAIPGLAVSLCPEPGNKKSL 580          
BLAST of mRNA_Ecto-sp13_S_contig18109.5576.1 vs. uniprot
Match: A0A6A3ILC1_9STRA (Metal transporter n=3 Tax=Phytophthora TaxID=4783 RepID=A0A6A3ILC1_9STRA)

HSP 1 Score: 270 bits (690), Expect = 9.210e-82
Identity = 163/341 (47.80%), Postives = 212/341 (62.17%), Query Frame = 1
Query:    1 KLEALFVLLVSIMTVAFFIDFFLSPPSPADVAEGFSFTAESYATVPALGLIGAVIMPHNIYLHSALVLSRVVDRTRPRKLWEATKYYTIDSGIALMVAFMINLAVVCTFAKQFYDETCATASEP----SACFVGDSIDPTQPSYGSCD-ADGTGLCQEIGLSAAAAALRGTLGSSAKYVWAIGLLAAGQSSTMTGTYAGQFVMEGFLQLKIPKWQRVLLTRIIALGPALGVTVFMGGDIRATDRLSAWLNVLQSLQLPFAIIPLLTFCNSPHVMGEFTITSSMTVFVWMVSIGIIGINISIVLGFLFDEGISSEGAAAPWLYACTAIGASLYLGFILFLMR 1008
            KLEA FV L+ +M V F  +      +  DVA GF    ESYA   A+G++GAVIMPHNI+LHSALV SR VDR   RK+ EA KY+ I+SGIAL V+F+INLAV+  FAK F+   C+   E     +AC  G   D    +YG+C   +G G+CQ IGLS A  AL G  G  +  +WAIGLLAAGQSSTMTGTYAGQFVMEGFL L I  W+R++LTR ++L PA+ V +    +   +D +   LNVLQS+QLPFA++P+L F  SP +MG+F  + +  V  W++   +  IN+ +V   L  EG+S   A    L         LY GF+ +LMR
Sbjct:  184 KLEAFFVSLIVVMLVCFCANLVRGDVASVDVARGFVPRVESYAVTQAVGIVGAVIMPHNIFLHSALVQSRQVDRHDVRKVREANKYFAIESGIALFVSFLINLAVLAVFAKGFFSSDCSATFESDGLNTACVPGAGADGD--AYGACHLTNGEGMCQPIGLSQAGIALNGMRGQYSDVIWAIGLLAAGQSSTMTGTYAGQFVMEGFLNLHILPWKRLVLTRCVSLVPAMAVAILSQRNPGDSDTMDEMLNVLQSIQLPFALLPILIFTRSPAIMGDFVNSKTTVVTGWLLGGFVCIINVHLVFTNL--EGLSPGFAGLSMLLGVCC----LYFGFLAYLMR 516          
BLAST of mRNA_Ecto-sp13_S_contig18109.5576.1 vs. uniprot
Match: H3GQQ0_PHYRM (Uncharacterized protein n=30 Tax=Phytophthora TaxID=4783 RepID=H3GQQ0_PHYRM)

HSP 1 Score: 268 bits (686), Expect = 7.860e-81
Identity = 160/354 (45.20%), Postives = 217/354 (61.30%), Query Frame = 1
Query:    1 KLEALFVLLVSIMTVAFFIDFFLSPPSPADVAEGFSFTAESYATVPALGLIGAVIMPHNIYLHSALVLSRVVDRTRPRKLWEATKYYTIDSGIALMVAFMINLAVVCTFAKQFYDETCATASEPS----ACFVGDSIDPTQPSYGSCD--ADGTGLCQEIGLSAAAAALRGTLGSSAKYVWAIGLLAAGQSSTMTGTYAGQFVMEGFLQLKIPKWQRVLLTRIIALGPALGVTVFMGGDIRATDRLSAWLNVLQSLQLPFAIIPLLTFCNSPHVMGEFTITSSMTVFVWMVSIGIIGINISIVLGFLFDEGISSEGAAAPWLYACTAIGASLYLGFILFLMREDLQKLRRRAES 1044
            KLEA FV+L+ +M V F  +      +  DV  GF    + YA   A+G++GAVIMPHNI+LHSALV +R V+R   RK+ EA KY+ I+SG AL V+F+INLAV+  FAK F+   C ++ + +    AC  G   D    +YG C   + G G+CQEIGLS A  AL G LG  A  +WA+GLLAAGQSSTMTGTYAGQFVMEGFLQL I  W+RV LTR ++L PA+ V +    +   +D +   LNVLQS+QLPFA++P+L F +SP +MG+F  + +  V  WM+   +  IN+ ++   L    + + G  A     C      LY GF+ +L R D+    +RA +
Sbjct:  212 KLEAFFVVLIGVMLVCFCANLVRGEVASEDVVSGFVPRVDRYAVTQAVGILGAVIMPHNIFLHSALVQTRQVNRHDGRKVREANKYFAIESGFALFVSFLINLAVLAVFAKGFFSPDCTSSYDSTGVNTACVPGAIADGE--TYGHCQLASGGEGMCQEIGLSQAGVALSGMLGQYADIIWAVGLLAAGQSSTMTGTYAGQFVMEGFLQLHISPWKRVALTRCVSLVPAMTVAILSQQNPADSDHMDELLNVLQSIQLPFALLPVLIFTSSPAIMGDFANSKATVVAGWMLGGLVCVINLYLIFTNLEGLALGAVGLVALGGTCC------LYFGFLGYLARADMTLSAQRART 557          
BLAST of mRNA_Ecto-sp13_S_contig18109.5576.1 vs. uniprot
Match: A0A067BSV6_SAPPC (Uncharacterized protein n=1 Tax=Saprolegnia parasitica (strain CBS 223.65) TaxID=695850 RepID=A0A067BSV6_SAPPC)

HSP 1 Score: 259 bits (663), Expect = 9.100e-80
Identity = 157/348 (45.11%), Postives = 219/348 (62.93%), Query Frame = 1
Query:    1 KLEALFVLLVSIMTVAFFIDFFLSPPSPADVAEGFSFTAES-YATVPALGLIGAVIMPHNIYLHSALVLSRVVDRTRPRKLWEATKYYTIDSGIALMVAFMINLAVVCTFAKQFYDETCATASEP----SACFVGDSIDPTQPSYGSCDA-DGT-GLCQEIGLSAAAAALRGTLGSSAKYVWAIGLLAAGQSSTMTGTYAGQFVMEGFLQLKIPKWQRVLLTRIIALGPALGVTVFMGGDIRATDRLSAWLNVLQSLQLPFAIIPLLTFCNSPHVMGEFTITSSMTVFVWMVSIGIIGINISIVLGFLFDEGISSEGAAAPWLYACTAIGASLYLGFILFLMREDLQK 1023
            KLEA FV L+++M   F ++       P  V +GF     S YAT  A+G++GAVIMPHN YLHS LV SR VDRT  RK+ EA KY+TI+S +AL V+F+INLAV+C FAK F+   C  + E     +AC   ++   T  SYGSC   +G+ G+CQEIGLS A  ALRG L   ++ +WAIGLLAAGQSSTM GTYAGQFVMEGFL++++  W+RV LTR +AL PAL V ++      A+D +   LNVLQS+QLPFA++P+L F +   +MG F  +++     W V++ +  +N+ +V+       +S  G  +   +     G   Y+ F+ +L+  +LQ+
Sbjct:   20 KLEAFFVALIAVMLACFCMNLAQGGVDPIPVLDGFLPRPPSRYATTQAVGILGAVIMPHNFYLHSGLVQSRAVDRTNARKVREANKYFTIESAVALFVSFLINLAVMCVFAKGFFSPDCLQSFETHGVNTACVPLNTS--TTESYGSCQLMEGSRGVCQEIGLSGAGLALRGVLDEYSETIWAIGLLAAGQSSTMAGTYAGQFVMEGFLRIQLAPWKRVALTRAVALVPALAVAIWSDTQPGASDTIGEMLNVLQSIQLPFALLPILHFTSHAGLMGAFVNSTTTKAAGWAVALLVCLVNLYLVVQ---KVDVSEMGPVSLLAFFSAGTG---YVAFLAYLVHTELQQ 359          
BLAST of mRNA_Ecto-sp13_S_contig18109.5576.1 vs. uniprot
Match: A0A7S3YUG6_9EUKA (Hypothetical protein n=2 Tax=Lotharella globosa TaxID=91324 RepID=A0A7S3YUG6_9EUKA)

HSP 1 Score: 265 bits (676), Expect = 1.190e-79
Identity = 155/356 (43.54%), Postives = 216/356 (60.67%), Query Frame = 1
Query:    1 KLEALFVLLVSIMTVAFFIDFFLSPPSPADVAEG-FSFTAESYATVPALGLIGAVIMPHNIYLHSALVLSRVVDRTRPRKLWEATKYYTIDSGIALMVAFMINLAVVCTFAKQFYDETCATASEPSACFVGDSID--PTQPSYGSCDAD-------GTGLCQEIGLSAAAAALRGTLGSSAKYVWAIGLLAAGQSSTMTGTYAGQFVMEGFLQLKIPKWQRVLLTRIIALGPALGVTVFMGGDIRATDRLSAWLNVLQSLQLPFAIIPLLTFCNSPHVMGEFTITSSMTVFVWMVSIGIIGINISIVLGFLFDEGISSEGAAAPWLYACTAIGASLYLGFILFLMREDLQKLRRRA 1038
            KLE++F  ++ +M V FFI++  S         G F  T E YA +PA+G +GAVIMPHNIYLHSALVLSR +DR  P K+WEA KY  I+SG+AL+++F IN AVV TF   F++  CA+    +   V    D  P    +     D       G G C EIGLS A  AL  TLGS+AKY+W +G+LA+GQ+STMTGTYAGQFVM+GFLQLK+  W+R ++TR++ALGPA+ V +    D   +D L+ WLNVLQS+QLPFA++P+L   +S  VM +F  T +     W  +  +   N+ +V+ F +++  S    +A W +        LY  FI +++ + +     RA
Sbjct:  177 KLESVFCAMIFVMCVCFFINWGKSGTDAGQFMFGLFVPTIEDYALIPAVGTLGAVIMPHNIYLHSALVLSRKIDRRDPTKVWEAIKYNAIESGMALLISFFINAAVVVTFTTHFFNVGCASLEAGNFACVDTRSDGIPEDDYFNGISPDTCVNEHNGYGRCAEIGLSTAGHALGQTLGSAAKYIWGVGVLASGQASTMTGTYAGQFVMQGFLQLKVAPWKRTMMTRLVALGPAVIVALGTAHDPVISDTLNEWLNVLQSIQLPFALLPVLILTSSALVMEQFVNTPATNFIGWCGAALVFAANLYLVIDFCWEDN-SKHVPSADWFHPTVIFLLVLYFVFIGWVIYDGIVGFALRA 531          
BLAST of mRNA_Ecto-sp13_S_contig18109.5576.1 vs. uniprot
Match: A0A7S3YHG8_9EUKA (Hypothetical protein n=3 Tax=Lotharella globosa TaxID=91324 RepID=A0A7S3YHG8_9EUKA)

HSP 1 Score: 266 bits (680), Expect = 2.780e-79
Identity = 152/362 (41.99%), Postives = 224/362 (61.88%), Query Frame = 1
Query:    1 KLEALFVLLVSIMTVAFFIDFFLSPPSPADVAEGFSF-----TAESYATVPALGLIGAVIMPHNIYLHSALVLSRVVDRTRPRKLWEATKYYTIDSGIALMVAFMINLAVVCTFAKQFYDETCATASEPS-ACFV-------GDSIDPTQ-PSYGSCDADGTGLCQEIGLSAAAAALRGTLGSSAKYVWAIGLLAAGQSSTMTGTYAGQFVMEGFLQLKIPKWQRVLLTRIIALGPALGVTVFMGGDIRATDRLSAWLNVLQSLQLPFAIIPLLTFCNSPHVMGEFTITSSMTVFVWMVSIGIIGINISIVLGFLFDEGISSEGAAAPWLYACTAIGASLYLGFILFLMREDLQKLRRRAES 1044
            KLEA F  L+ +M + FFI++ ++        E F F     T   Y  + A+  +GAVIMPHNI+LHSALVLSR +DR  P K+ EA KY  I+S IAL+V+F IN A+V TF + F++  C++  + + AC         G+  DPTQ PS  +    G G+C EIGLS+A  AL+  LG +AKY+W  GLLA+GQ+STMTGTYAGQFVM+GFLQ+++  W R ++TR +ALGPA+ V +         D L  WLN+LQS+QLPFA++P+L   ++P +MG+FT   ++ +  W  +IG+  +N+ +V+ F FD   ++    A W  A   +   +Y  FI +++ + L+  R+  ++
Sbjct:  247 KLEAFFCTLIFMMCICFFINWGIAGSD----TEAFMFGLVVPTLNDYTVLQAVATVGAVIMPHNIFLHSALVLSRRIDRENPAKIREAIKYNAIESAIALIVSFFINAAIVVTFQRGFFNRECSSNFDRNYACLDSRAGIPDGNVFDPTQTPSSCASRFGGHGVCAEIGLSSAGDALKQFLGDAAKYIWGFGLLASGQASTMTGTYAGQFVMQGFLQIQVAPWLRTMITRSVALGPAVAVALATAHSPDLGDELGEWLNILQSVQLPFALLPVLMLTSAPAIMGQFTNRLTLKIIGWTAAIGVFAVNVYLVVSFCFDA--TNPVPDADWFRAIVIVFLVIYFIFIAYVVYDGLKGTRKSEDA 602          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig18109.5576.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LF38_ECTSI6.810e-26993.13Divalent metal transporter n=2 Tax=Ectocarpus TaxI... [more]
A0A835YZC9_9STRA1.580e-12461.05Divalent metal transporter n=1 Tax=Tribonema minus... [more]
A0A4D9D1G8_9STRA1.670e-9250.00Uncharacterized protein n=1 Tax=Nannochloropsis sa... [more]
W7TP25_9STRA5.960e-8750.292-isopropylmalate synthase n=1 Tax=Nannochloropsis... [more]
A0A7S2Y3E1_9STRA7.910e-8343.56Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
A0A6A3ILC1_9STRA9.210e-8247.80Metal transporter n=3 Tax=Phytophthora TaxID=4783 ... [more]
H3GQQ0_PHYRM7.860e-8145.20Uncharacterized protein n=30 Tax=Phytophthora TaxI... [more]
A0A067BSV6_SAPPC9.100e-8045.11Uncharacterized protein n=1 Tax=Saprolegnia parasi... [more]
A0A7S3YUG6_9EUKA1.190e-7943.54Hypothetical protein n=2 Tax=Lotharella globosa Ta... [more]
A0A7S3YHG8_9EUKA2.780e-7941.99Hypothetical protein n=3 Tax=Lotharella globosa Ta... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig18109contigEcto-sp13_S_contig18109:96..2929 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop1
Start0
Seed ortholog score751.5
Seed ortholog evalue2.1e-214
Seed eggNOG ortholog2880.D8LF38
Model size1269
KEGG rclassRC00005,RC00017,RC00049,RC02748
KEGG koko:K16055,ko:K21398
KEGG TC2.A.55.2.1,2.A.55.2.2
KEGG ReactionR02737,R02778
KEGG Pathwayko00500,ko01100,ko04142,ko04216,ko04978,map00500,map01100,map04142,map04216,map04978
Hectar predicted targeting categorysignal peptide
Exons4
EggNOG free text desc.transition metal ion homeostasis
EggNOG OGsCOG1914@1,KOG1291@2759
EC2.4.1.15,3.1.3.12
Cds size1269
COG Functional cat.P
CAZyGT20
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko01000,ko01003,ko02000
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681462935.1053717-CDS-Ecto-sp13_S_contig18109:95..3411681462935.1053717-CDS-Ecto-sp13_S_contig18109:95..341Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig18109 96..341 +
1681462935.1271558-CDS-Ecto-sp13_S_contig18109:1082..13761681462935.1271558-CDS-Ecto-sp13_S_contig18109:1082..1376Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig18109 1083..1376 +
1681462935.1383827-CDS-Ecto-sp13_S_contig18109:1676..19301681462935.1383827-CDS-Ecto-sp13_S_contig18109:1676..1930Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig18109 1677..1930 +
1681462935.148537-CDS-Ecto-sp13_S_contig18109:2454..29291681462935.148537-CDS-Ecto-sp13_S_contig18109:2454..2929Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig18109 2455..2929 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig18109.5576.1prot_Ecto-sp13_S_contig18109.5576.1Ectocarpus species13 EcNAP12_S_4_19mpolypeptideEcto-sp13_S_contig18109 96..2929 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp13_S_contig18109.5576.1

>prot_Ecto-sp13_S_contig18109.5576.1 ID=prot_Ecto-sp13_S_contig18109.5576.1|Name=mRNA_Ecto-sp13_S_contig18109.5576.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=423bp
KLEALFVLLVSIMTVAFFIDFFLSPPSPADVAEGFSFTAESYATVPALGL
IGAVIMPHNIYLHSALVLSRVVDRTRPRKLWEATKYYTIDSGIALMVAFM
INLAVVCTFAKQFYDETCATASEPSACFVGDSIDPTQPSYGSCDADGTGL
CQEIGLSAAAAALRGTLGSSAKYVWAIGLLAAGQSSTMTGTYAGQFVMEG
FLQLKIPKWQRVLLTRIIALGPALGVTVFMGGDIRATDRLSAWLNVLQSL
QLPFAIIPLLTFCNSPHVMGEFTITSSMTVFVWMVSIGIIGINISIVLGF
LFDEGISSEGAAAPWLYACTAIGASLYLGFILFLMREDLQKLRRRAESLF
WELGRHDNVGFYALNDNCHPRDGGGRPEMLRSTSDDGSLSPLEPGAGSEA
RHEQIQGAAVGDERRNGDDTRA*
back to top

mRNA from alignment at Ecto-sp13_S_contig18109:96..2929+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp13_S_contig18109.5576.1 ID=mRNA_Ecto-sp13_S_contig18109.5576.1|Name=mRNA_Ecto-sp13_S_contig18109.5576.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=2834bp|location=Sequence derived from alignment at Ecto-sp13_S_contig18109:96..2929+ (Ectocarpus species13 EcNAP12_S_4_19m)
AAGCTCGAGGCGTTGTTTGTGCTCCTGGTGTCGATCATGACGGTGGCCTT CTTCATCGACTTCTTCCTGAGCCCGCCGTCGCCGGCGGACGTTGCGGAGG GCTTCTCCTTCACGGCGGAGTCGTACGCGACAGTGCCAGCGCTTGGGCTG ATCGGGGCCGTCATCATGCCCCACAACATCTACCTGCACTCCGCCCTGGT GCTCTCGCGCGTGGTGGACAGGACGAGACCCAGGAAGCTGTGGGAGGTGG GCCGGATGGACTCATGTTGACGGGTATTGTAGCCGCTGCTGCTGCTGTCG TACGGCGGAGTTTGTAGAGTGGAGGGGGAATGGGGGTGTGCTCATGTACC GGAAGGTTGCGAGTCAGCGAACAGGGGTGCGAGCTATTTTCAAGGCGTAA TTTCTCCACAGCGAGAAGGGTGCGAGCGCCAACTGACTCTCCTCAGGAAA GCTCTCCATGAGATATTTCCAAAACCGCCCTTTTCGACAGGGGTAATCTC CTGGTTGTGGAGAAATTACGCCTTAAAAATAGCTCGCACCCCTGTTCGCT GACTCGCAACCTTACGGTAAGCGCATACCGTAGTCGTTGGAACCACTGAC CTTGCGTCCCTACAATGCCGGGACGGAGCGAGTTTGCGTCGGCCCATGCT CCGTTTTTTCAAGGATGAAACAGGGAGGAAGGGGTCGTCATATGGTTGTG TCGCGTGCTGGGTGGCGAAATGGTCTGTAGGACCGTTGTGTTCCAATTCC CCCGAAGCGAGAATTTGCTTTTGTTTGTTTGTTCTAGAAATTATGTACCC CAGAAGCCGCCCGCGTCAGTTGAACCAGTACGGACATTAGAATGTACTGA GCGAAGACCGGAACGGTTTTAAACGTGAAGACAACAGAACATTATACGCG TCTAATCTCGCCCCCGCCCCCGCCCCTCCCGTCCTCTGCCTTTTCGCGGC GCCAACACTCGCCTTTGGGTGTCGGCGACGACAATAGGCCACCAAGTACT ACACCATCGACAGCGGGATCGCGCTGATGGTGGCGTTCATGATCAACCTT GCCGTGGTCTGCACGTTCGCCAAGCAGTTCTACGACGAGACGTGCGCCAC CGCGTCTGAGCCGTCGGCCTGCTTCGTCGGGGACTCGATCGATCCCACGC AGCCGTCTTACGGTAGCTGCGACGCGGACGGCACGGGGCTTTGCCAAGAG ATAGGGCTCTCGGCAGCGGCGGCCGCGCTGCGGGGAACGCTAGGGTCATC GGCGAAGTACGTGTGGGCCATTGGTTTGCTGGTGAGGAGAGCACAGCGAT CATCCATGTTGGATAGGTTTTCTGTGGCCAGGGAGTGAAAAGGTCGTTTT TTTTCCTCCTAAACATATGCCGGTGTTCCTGGTACTGTTGTTTTCAACCT TGGTCACTATGTTCAACGGTCGTATTTTTTTGTGTGTTTTCTTTTTTCTT CTACCCTTGGTGAAAGGGTACCCGAGGTTTTTGTCTGTAACGATGCCGTT CTGTGATTTTCGCAACAACTGAGCTTATGCGAGTGAATCCTGACACAAGA CCATTTTTTTTTTTCTGCCTGAATAATACAGGCGGCAGGCCAAAGCAGCA CCATGACGGGGACGTACGCGGGGCAATTCGTGATGGAGGGCTTCCTGCAG CTTAAGATTCCCAAGTGGCAGAGGGTTCTCTTAACGCGAATCATCGCTCT AGGCCCCGCCCTGGGGGTGACGGTGTTCATGGGCGGGGACATCCGAGCGA CCGACCGCTTGAGCGCGTGGCTCAACGTACTGCAGAGCTTGCAGCTACCG TTCGCCATCATTCCGCTCCTGACGTTCTGCAATAGGTGAGGAGGTGTCTG TCGCTGCGTTCTGCGGTGGCGGCGGCGGCGGCGTGTTGTAGGCTTGGGTG TCGACCAGTCAGGGGTTTGCTGCACCTCTGTCTTGGGTTCGTGGGTGGCG GCATGGGGTCGTGCAGGTTGCTGATGTCGTGGTCTTGCCGAGAACGGGGT GTGAGGCTCCTCTTGCGTACACCCTTTCCTACGCCTAAAGGCCCCGATGA GTACCGCGATACCATAGAGCGGGGTCGGGCAGAAGAGGCCAAAATAGGAG CTCTGCGATTGAAGTGGTGAAGAGTGCAGCATACCAAGTTTCGAGTGCCT CTTCGTGCGGTAAGATGGTTCACCTGGCTTGTGGGCAGAAGGCGTCGCCG CGATAAGCACCAACACGCAGAATTCGGCATCTTTGTCCCTGAACAGCGTT GGATCGTCACCTAGTGTAAGCCCAGTCTTTATACCACGCCTCGACATGAC CGCAGGCAGTACTGTCCCTCCCTCACCCATCCCTGCTCGCCCTTCTCCTC CCCCAAAAGCCCGCACGTCATGGGCGAGTTCACCATCACCAGTTCCATGA CGGTCTTCGTGTGGATGGTGTCGATCGGCATCATCGGGATCAACATCTCC ATCGTCTTGGGCTTCCTCTTCGATGAGGGCATCTCTTCTGAGGGAGCGGC GGCCCCCTGGCTCTACGCTTGCACGGCCATCGGGGCTTCCCTCTACCTGG GCTTCATCCTGTTCCTCATGCGGGAGGACCTGCAGAAGCTGAGGCGGCGA GCCGAGTCGCTGTTCTGGGAGCTCGGCAGGCACGACAACGTGGGATTCTA CGCCTTGAACGATAACTGCCACCCCCGGGATGGTGGCGGTAGACCGGAAA TGTTGCGGTCGACGTCGGATGACGGTAGCTTGAGTCCTCTGGAGCCGGGT GCGGGGTCCGAGGCGAGGCATGAGCAAATACAGGGGGCGGCGGTGGGGGA TGAGCGCCGAAACGGCGACGATACGCGAGCATAA
back to top

Coding sequence (CDS) from alignment at Ecto-sp13_S_contig18109:96..2929+

>mRNA_Ecto-sp13_S_contig18109.5576.1 ID=mRNA_Ecto-sp13_S_contig18109.5576.1|Name=mRNA_Ecto-sp13_S_contig18109.5576.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=1269bp|location=Sequence derived from alignment at Ecto-sp13_S_contig18109:96..2929+ (Ectocarpus species13 EcNAP12_S_4_19m)
AAGCTCGAGGCGTTGTTTGTGCTCCTGGTGTCGATCATGACGGTGGCCTT
CTTCATCGACTTCTTCCTGAGCCCGCCGTCGCCGGCGGACGTTGCGGAGG
GCTTCTCCTTCACGGCGGAGTCGTACGCGACAGTGCCAGCGCTTGGGCTG
ATCGGGGCCGTCATCATGCCCCACAACATCTACCTGCACTCCGCCCTGGT
GCTCTCGCGCGTGGTGGACAGGACGAGACCCAGGAAGCTGTGGGAGGCCA
CCAAGTACTACACCATCGACAGCGGGATCGCGCTGATGGTGGCGTTCATG
ATCAACCTTGCCGTGGTCTGCACGTTCGCCAAGCAGTTCTACGACGAGAC
GTGCGCCACCGCGTCTGAGCCGTCGGCCTGCTTCGTCGGGGACTCGATCG
ATCCCACGCAGCCGTCTTACGGTAGCTGCGACGCGGACGGCACGGGGCTT
TGCCAAGAGATAGGGCTCTCGGCAGCGGCGGCCGCGCTGCGGGGAACGCT
AGGGTCATCGGCGAAGTACGTGTGGGCCATTGGTTTGCTGGCGGCAGGCC
AAAGCAGCACCATGACGGGGACGTACGCGGGGCAATTCGTGATGGAGGGC
TTCCTGCAGCTTAAGATTCCCAAGTGGCAGAGGGTTCTCTTAACGCGAAT
CATCGCTCTAGGCCCCGCCCTGGGGGTGACGGTGTTCATGGGCGGGGACA
TCCGAGCGACCGACCGCTTGAGCGCGTGGCTCAACGTACTGCAGAGCTTG
CAGCTACCGTTCGCCATCATTCCGCTCCTGACGTTCTGCAATAGCCCGCA
CGTCATGGGCGAGTTCACCATCACCAGTTCCATGACGGTCTTCGTGTGGA
TGGTGTCGATCGGCATCATCGGGATCAACATCTCCATCGTCTTGGGCTTC
CTCTTCGATGAGGGCATCTCTTCTGAGGGAGCGGCGGCCCCCTGGCTCTA
CGCTTGCACGGCCATCGGGGCTTCCCTCTACCTGGGCTTCATCCTGTTCC
TCATGCGGGAGGACCTGCAGAAGCTGAGGCGGCGAGCCGAGTCGCTGTTC
TGGGAGCTCGGCAGGCACGACAACGTGGGATTCTACGCCTTGAACGATAA
CTGCCACCCCCGGGATGGTGGCGGTAGACCGGAAATGTTGCGGTCGACGT
CGGATGACGGTAGCTTGAGTCCTCTGGAGCCGGGTGCGGGGTCCGAGGCG
AGGCATGAGCAAATACAGGGGGCGGCGGTGGGGGATGAGCGCCGAAACGG
CGACGATACGCGAGCATAA
back to top