prot_Ecto-sp13_S_contig18087.5562.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig18087.5562.1
Unique Nameprot_Ecto-sp13_S_contig18087.5562.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length130
Homology
[Close]
BLAST of mRNA_Ecto-sp13_S_contig18087.5562.1 vs. uniprot
Match: D7FJE1_ECTSI (2-dehydropantoate 2-reductase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FJE1_ECTSI)

HSP 1 Score: 228 bits (580), Expect = 4.140e-74
Identity = 115/120 (95.83%), Postives = 116/120 (96.67%), Query Frame = 0 
Query:    2 YTHGVVIFNTVHAAAALAGGALRDLVRDRHARLLWAAMIREGLQALTLAARGGDWRAANPCCGVTLPQLELLLCLPTFLFSLVSRLLLRFPPMLAPAMQTDLADGRETSVAWTLEEIVRI 121
            YTHGVVIFNTVHAAAALAGG LRDLVRDRHARLLWAAMIREGLQALTLAARGGDWRAANPCCGVTLPQLEL LCLPTFLFSLVS LLLRFPPMLAPAMQ DLADGR+TSVAWTLEEIVRI
Sbjct:   76 YTHGVVIFNTVHAAAALAGGPLRDLVRDRHARLLWAAMIREGLQALTLAARGGDWRAANPCCGVTLPQLELFLCLPTFLFSLVSGLLLRFPPMLAPAMQADLADGRDTSVAWTLEEIVRI 195
[Close]
BLAST of mRNA_Ecto-sp13_S_contig18087.5562.1 vs. uniprot
Match: A0A6H5L503_9PHAE (ApbA_C domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L503_9PHAE)

HSP 1 Score: 226 bits (577), Expect = 2.190e-70
Identity = 114/120 (95.00%), Postives = 116/120 (96.67%), Query Frame = 0 
Query:    2 YTHGVVIFNTVHAAAALAGGALRDLVRDRHARLLWAAMIREGLQALTLAARGGDWRAANPCCGVTLPQLELLLCLPTFLFSLVSRLLLRFPPMLAPAMQTDLADGRETSVAWTLEEIVRI 121
            YTHGVVIFNTVHA AALAGG+LRDLVRDRHARLLWAAMIREGLQALTLAARGGDWRAANPCCGVTLPQLEL LCLPTFLFSLVS LLLRFPPMLAPAMQ DLADGR+TSVAWTLEEIVRI
Sbjct:  230 YTHGVVIFNTVHAPAALAGGSLRDLVRDRHARLLWAAMIREGLQALTLAARGGDWRAANPCCGVTLPQLELFLCLPTFLFSLVSGLLLRFPPMLAPAMQADLADGRDTSVAWTLEEIVRI 349
[Close]
BLAST of mRNA_Ecto-sp13_S_contig18087.5562.1 vs. uniprot
Match: A0A2G6KRZ4_9GAMM (2-dehydropantoate 2-reductase n=2 Tax=Proteobacteria TaxID=1224 RepID=A0A2G6KRZ4_9GAMM)

HSP 1 Score: 53.5 bits (127), Expect = 1.030e-5
Identity = 45/127 (35.43%), Postives = 63/127 (49.61%), Query Frame = 0 
Query:    5 GVVIFNTVHAAAALAGGALRDLVRDRHARLLWAAMIREGLQALTLAARGGDWRAANPC-CGVTLPQL-ELLLCLPTFLFSLVSRLLLRFPPMLAPAMQTDLADGRETSVAWTLEEIVRIGLFAFLSC 129
            G +I N  +   ALAG  L + +  R  R + AA IRE L+ L  A          P   G   P L   +L LP++LF LV+R +L+  P    +MQ DL  GR+T V +   EI+ +G  + L C
Sbjct:  183 GKLIMNLNNPVNALAGIPLIEELEQRKYRKVLAASIREALEVLKQAG-------IKPARIGKVPPSLMPAILELPSWLFKLVARAMLKIDPQATSSMQEDLVSGRKTEVDYLNGEIITLGEKSGLQC 302
[Close]
BLAST of mRNA_Ecto-sp13_S_contig18087.5562.1 vs. uniprot
Match: A0A482SDN2_9ARCH (Uncharacterized protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A482SDN2_9ARCH)

HSP 1 Score: 49.7 bits (117), Expect = 4.530e-5
Identity = 40/119 (33.61%), Postives = 60/119 (50.42%), Query Frame = 0 
Query:    7 VIFNTVHAAAALAGGALRDLVRDRHARLLWAAMIREGLQALTLAARGGDWRA--ANPCCGVTLPQLELLLCLPTFLFSLVSRLLLRFPP--MLAPAMQTDLADGRETSVAWTLEEIVRI 121
            +I+ T H       G L   +  R  RL+ A +IRE +  L  AARGG W+         +T   LE+ + LP   F+LV      +P   +++PA Q DL +GR+T V   L+E+V +
Sbjct:    1 MIYETCHLLNIFTKGTLNHTLALRSHRLVLALLIREHIDVLEAAARGGKWKPDLLMMTFYLTPKLLEMTVLLPDMCFALVFWFFGLYPRDGVMSPA-QFDLMEGRKTIVLGNLKELVEV 118
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig18087.5562.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
D7FJE1_ECTSI4.140e-7495.832-dehydropantoate 2-reductase n=1 Tax=Ectocarpus s... [more]
A0A6H5L503_9PHAE2.190e-7095.00ApbA_C domain-containing protein n=1 Tax=Ectocarpu... [more]
A0A2G6KRZ4_9GAMM1.030e-535.432-dehydropantoate 2-reductase n=2 Tax=Proteobacter... [more]
A0A482SDN2_9ARCH4.530e-533.61Uncharacterized protein n=1 Tax=archaeon TaxID=190... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..69
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 90..129
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 70..89

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig18087contigEcto-sp13_S_contig18087:354..3514 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig18087.5562.1mRNA_Ecto-sp13_S_contig18087.5562.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig18087 354..3514 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig18087.5562.1 ID=prot_Ecto-sp13_S_contig18087.5562.1|Name=mRNA_Ecto-sp13_S_contig18087.5562.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=130bp
AYTHGVVIFNTVHAAAALAGGALRDLVRDRHARLLWAAMIREGLQALTLA
ARGGDWRAANPCCGVTLPQLELLLCLPTFLFSLVSRLLLRFPPMLAPAMQ
TDLADGRETSVAWTLEEIVRIGLFAFLSC*
back to top