prot_Ecto-sp13_S_contig18085.5561.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig18085.5561.1
Unique Nameprot_Ecto-sp13_S_contig18085.5561.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length160
Homology
BLAST of mRNA_Ecto-sp13_S_contig18085.5561.1 vs. uniprot
Match: D8LG60_ECTSI (Histone deactylase of possible bacterial origin with ankyrin repeats at the N-terminus n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LG60_ECTSI)

HSP 1 Score: 266 bits (679), Expect = 1.970e-79
Identity = 136/141 (96.45%), Postives = 140/141 (99.29%), Query Frame = 0
Query:    1 GEGVGEEESDGEDSEGLCLPGTEQTGRWTKAEHELFLKALKKYGKEWKRVACMVRTRTVVQTRTHAQKYFQKLTKAAAGGGISLEDGEGPDLMDIEVHMNTIDPSQATSAGSAPRTRGGAKRSRAGTSTSPSQHPPAASSG 141
            GEGVG+EESDGEDSEGLCLPGTEQTGRWTKAEHELFL+ALKKYGKEWKRVACMVRTRTVVQTRTHAQKYFQKLTKAAAGGGISLEDGEGPDLMDIEVHMNTIDPSQAT+AGSAPRTRGGAKRSRAGTSTSPSQHPPAA +G
Sbjct:  724 GEGVGDEESDGEDSEGLCLPGTEQTGRWTKAEHELFLRALKKYGKEWKRVACMVRTRTVVQTRTHAQKYFQKLTKAAAGGGISLEDGEGPDLMDIEVHMNTIDPSQATNAGSAPRTRGGAKRSRAGTSTSPSQHPPAAGTG 864          
BLAST of mRNA_Ecto-sp13_S_contig18085.5561.1 vs. uniprot
Match: A0A6H5K5H7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K5H7_9PHAE)

HSP 1 Score: 176 bits (445), Expect = 5.560e-48
Identity = 99/128 (77.34%), Postives = 99/128 (77.34%), Query Frame = 0
Query:   11 GEDSEGLCLPGTEQTGRWTKAEHELFLKALKKYGKEWKRVACMVRTRTVVQTRTHAQKYFQKLTKAAAGGGISLEDGEGPDLMDIEVHMNTIDPSQATSAGSAPRTRGGAKRSRAGTSTSPSQHPPAA 138
            GEDSEGLCLPGTEQTGRWTKAEHELFLKALKKYGKEWKRVACMVRTRTVVQTRTHAQKYFQKLTKAAA                            ATSAGSAPRTRGGAKRSRAGTST PSQHPPAA
Sbjct:  212 GEDSEGLCLPGTEQTGRWTKAEHELFLKALKKYGKEWKRVACMVRTRTVVQTRTHAQKYFQKLTKAAA----------------------------ATSAGSAPRTRGGAKRSRAGTSTXPSQHPPAA 311          
BLAST of mRNA_Ecto-sp13_S_contig18085.5561.1 vs. uniprot
Match: A0A835YHT8_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YHT8_9STRA)

HSP 1 Score: 110 bits (276), Expect = 7.780e-29
Identity = 54/72 (75.00%), Postives = 59/72 (81.94%), Query Frame = 0
Query:   15 EGLCLPGTEQTGRWTKAEHELFLKALKKYGKEWKRVACMVRTRTVVQTRTHAQKYFQKLTKAAAGGGISLED 86
            +G+C PGTEQTGRWTK EH+LFLKAL  YGKEWKRVA MV TRTVVQTRTHAQKYFQKL K + G    L+D
Sbjct:   19 QGVCAPGTEQTGRWTKGEHDLFLKALGVYGKEWKRVAAMVGTRTVVQTRTHAQKYFQKLQKTSGGEMECLDD 90          
BLAST of mRNA_Ecto-sp13_S_contig18085.5561.1 vs. uniprot
Match: A0A7S3HM63_9STRA (Hypothetical protein (Fragment) n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3HM63_9STRA)

HSP 1 Score: 102 bits (253), Expect = 1.590e-22
Identity = 50/66 (75.76%), Postives = 56/66 (84.85%), Query Frame = 0
Query:   11 GEDSEGLCLPGTEQTGRWTKAEHELFLKALKKYGKEWKRVACMVRTRTVVQTRTHAQKYFQKLTKA 76
            G+D  G    G E TGRWT+ EHELFL+ALKKYGKEWK+VA MV+TRTVVQTRTHAQKYFQKLTK+
Sbjct:    4 GDDEPGTVPSGHESTGRWTRPEHELFLQALKKYGKEWKKVAGMVKTRTVVQTRTHAQKYFQKLTKS 69          
BLAST of mRNA_Ecto-sp13_S_contig18085.5561.1 vs. uniprot
Match: D8LE34_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LE34_ECTSI)

HSP 1 Score: 99.8 bits (247), Expect = 2.310e-21
Identity = 49/86 (56.98%), Postives = 61/86 (70.93%), Query Frame = 0
Query:    9 SDGEDSEGLCLPGTEQTGRWTKAEHELFLKALKKYGKEWKRVACMVRTRTVVQTRTHAQKYFQKLTKAAAGGGISLEDGEGPDLMD 94
            SD  D+EG+C PG E TGRWT  EH LFL+ L+ +GK WK++A +++TRTVVQ RTHAQKYFQKL+KA A G   L+       MD
Sbjct:   15 SDNLDNEGVCQPGNENTGRWTSDEHRLFLRGLELHGKGWKQIATLIQTRTVVQIRTHAQKYFQKLSKAQASGTSHLDPATLMSTMD 100          
BLAST of mRNA_Ecto-sp13_S_contig18085.5561.1 vs. uniprot
Match: W7TIJ3_9STRA (SANT/Myb domain protein n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TIJ3_9STRA)

HSP 1 Score: 95.5 bits (236), Expect = 5.160e-21
Identity = 48/70 (68.57%), Postives = 54/70 (77.14%), Query Frame = 0
Query:   17 LCLPGTEQTGRWTKAEHELFLKALKKYGKEWKRVACMVRTRTVVQTRTHAQKYFQKLTKAAAGGGISLED 86
            +C PG E TGRW++ EH+ F+  LKK+GKEWKRVA  V TRTVVQTRTHAQKYFQKL K  A G  SLED
Sbjct:   53 VCAPGAEHTGRWSRLEHDRFVDGLKKWGKEWKRVAGEVGTRTVVQTRTHAQKYFQKLQKHMANGA-SLED 121          
BLAST of mRNA_Ecto-sp13_S_contig18085.5561.1 vs. uniprot
Match: A0A4D9CLC8_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9CLC8_9STRA)

HSP 1 Score: 95.9 bits (237), Expect = 5.320e-20
Identity = 48/70 (68.57%), Postives = 54/70 (77.14%), Query Frame = 0
Query:   17 LCLPGTEQTGRWTKAEHELFLKALKKYGKEWKRVACMVRTRTVVQTRTHAQKYFQKLTKAAAGGGISLED 86
            +C PG E TGRW++ EH+ F+  LKK+GKEWKRVA  V TRTVVQTRTHAQKYFQKL K  A G  SLED
Sbjct:  219 VCAPGAEHTGRWSRLEHDRFVDGLKKWGKEWKRVAGEVGTRTVVQTRTHAQKYFQKLQKQMANGA-SLED 287          
BLAST of mRNA_Ecto-sp13_S_contig18085.5561.1 vs. uniprot
Match: A0A836C952_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C952_9STRA)

HSP 1 Score: 86.3 bits (212), Expect = 1.300e-19
Identity = 40/53 (75.47%), Postives = 46/53 (86.79%), Query Frame = 0
Query:   23 EQTGRWTKAEHELFLKALKKYGKEWKRVACMVRTRTVVQTRTHAQKYFQKLTK 75
            E TGRWTKAEH+LF+KAL  YG+EW+ +A MV TRTVVQTRTHAQKYFQKL +
Sbjct:    1 EHTGRWTKAEHDLFVKALNLYGREWRTIAAMVGTRTVVQTRTHAQKYFQKLQR 53          
BLAST of mRNA_Ecto-sp13_S_contig18085.5561.1 vs. uniprot
Match: A0A1Z5JSY0_FISSO (Uncharacterized protein n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5JSY0_FISSO)

HSP 1 Score: 93.6 bits (231), Expect = 3.500e-19
Identity = 46/61 (75.41%), Postives = 48/61 (78.69%), Query Frame = 0
Query:   21 GTEQTGRWTKAEHELFLKALKKYGKEWKRVACMVRTRTVVQTRTHAQKYFQKLTKAAAGGG 81
            G E TGRWTKAEHE FL  LK YGKEWK+VA  V+TRTVVQTRTHAQKYFQKL K A   G
Sbjct:  117 GKEHTGRWTKAEHEAFLAGLKMYGKEWKKVAARVKTRTVVQTRTHAQKYFQKLHKTAEDSG 177          
BLAST of mRNA_Ecto-sp13_S_contig18085.5561.1 vs. uniprot
Match: A0A448YY97_9STRA (Uncharacterized protein n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448YY97_9STRA)

HSP 1 Score: 92.8 bits (229), Expect = 6.530e-19
Identity = 46/63 (73.02%), Postives = 49/63 (77.78%), Query Frame = 0
Query:   17 LCLPGTEQTGRWTKAEHELFLKALKKYGKEWKRVACMVRTRTVVQTRTHAQKYFQKLTKAAAG 79
            L   G EQTGRWTK EHE FL  +K YGKEWK+VA  V+TRTVVQTRTHAQKYFQKL KA  G
Sbjct:   99 LVETGQEQTGRWTKDEHEAFLIGIKMYGKEWKKVAAKVKTRTVVQTRTHAQKYFQKLAKANEG 161          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig18085.5561.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LG60_ECTSI1.970e-7996.45Histone deactylase of possible bacterial origin wi... [more]
A0A6H5K5H7_9PHAE5.560e-4877.34Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A835YHT8_9STRA7.780e-2975.00Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A7S3HM63_9STRA1.590e-2275.76Hypothetical protein (Fragment) n=1 Tax=Spumella e... [more]
D8LE34_ECTSI2.310e-2156.98Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
W7TIJ3_9STRA5.160e-2168.57SANT/Myb domain protein n=1 Tax=Nannochloropsis ga... [more]
A0A4D9CLC8_9STRA5.320e-2068.57Uncharacterized protein n=1 Tax=Nannochloropsis sa... [more]
A0A836C952_9STRA1.300e-1975.47Uncharacterized protein (Fragment) n=1 Tax=Tribone... [more]
A0A1Z5JSY0_FISSO3.500e-1975.41Uncharacterized protein n=2 Tax=Fistulifera solari... [more]
A0A448YY97_9STRA6.530e-1973.02Uncharacterized protein n=1 Tax=Pseudo-nitzschia m... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001005SANT/Myb domainSMARTSM00717santcoord: 24..72
e-value: 4.9E-10
score: 49.3
IPR001005SANT/Myb domainPFAMPF00249Myb_DNA-bindingcoord: 25..69
e-value: 6.6E-12
score: 45.4
IPR006447Myb domain, plantsTIGRFAMTIGR01557TIGR01557coord: 27..72
e-value: 1.7E-12
score: 45.4
NoneNo IPR availableGENE3D1.10.10.60coord: 27..74
e-value: 7.0E-16
score: 60.0
NoneNo IPR availablePANTHERPTHR12802:SF20MPN DOMAIN-CONTAINING PROTEIN CG4751coord: 22..155
NoneNo IPR availablePANTHERPTHR12802SWI/SNF COMPLEX-RELATEDcoord: 22..155
IPR017930Myb domainPROSITEPS51294HTH_MYBcoord: 22..74
score: 13.241
IPR009057Homeobox-like domain superfamilySUPERFAMILY46689Homeodomain-likecoord: 22..75

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig18085contigEcto-sp13_S_contig18085:727..3037 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig18085.5561.1mRNA_Ecto-sp13_S_contig18085.5561.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig18085 727..3037 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig18085.5561.1 ID=prot_Ecto-sp13_S_contig18085.5561.1|Name=mRNA_Ecto-sp13_S_contig18085.5561.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=160bp
GEGVGEEESDGEDSEGLCLPGTEQTGRWTKAEHELFLKALKKYGKEWKRV
ACMVRTRTVVQTRTHAQKYFQKLTKAAAGGGISLEDGEGPDLMDIEVHMN
TIDPSQATSAGSAPRTRGGAKRSRAGTSTSPSQHPPAASSGSATSGAGAS
GSATSTVVVM
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001005SANT/Myb
IPR006447Myb_dom_plants
IPR017930Myb_dom
IPR009057Homeobox-like_sf