prot_Ecto-sp13_S_contig18085.5560.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig18085.5560.1
Unique Nameprot_Ecto-sp13_S_contig18085.5560.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length67
Homology
[Close]
BLAST of mRNA_Ecto-sp13_S_contig18085.5560.1 vs. uniprot
Match: A0A6H5K5H7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K5H7_9PHAE)

HSP 1 Score: 67.0 bits (162), Expect = 2.240e-11
Identity = 38/41 (92.68%), Postives = 40/41 (97.56%), Query Frame = 0 
Query:    1 QDAAKDSSRATLGQLAAKVQAEEKSRRTRAGMEDGVRNGDD 41
            QDAAKDSSRATLGQLAAKVQAEEKSRRTRAG+ DGVR+GDD
Sbjct:   75 QDAAKDSSRATLGQLAAKVQAEEKSRRTRAGVGDGVRDGDD 115
[Close]
BLAST of mRNA_Ecto-sp13_S_contig18085.5560.1 vs. uniprot
Match: D8LG60_ECTSI (Histone deactylase of possible bacterial origin with ankyrin repeats at the N-terminus n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LG60_ECTSI)

HSP 1 Score: 65.1 bits (157), Expect = 1.080e-10
Identity = 37/40 (92.50%), Postives = 39/40 (97.50%), Query Frame = 0 
Query:    1 QDAAKDSSRATLGQLAAKVQAEEKSRRTRAGMEDGVRNGD 40
            QDAAKDSSRATLGQLAAKVQAEEKSRRTRAG+ DGVR+GD
Sbjct:  555 QDAAKDSSRATLGQLAAKVQAEEKSRRTRAGVGDGVRDGD 594
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig18085.5560.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5K5H7_9PHAE2.240e-1192.68Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LG60_ECTSI1.080e-1092.50Histone deactylase of possible bacterial origin wi... [more]
back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig18085contigEcto-sp13_S_contig18085:346..546 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig18085.5560.1mRNA_Ecto-sp13_S_contig18085.5560.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig18085 346..548 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig18085.5560.1 ID=prot_Ecto-sp13_S_contig18085.5560.1|Name=mRNA_Ecto-sp13_S_contig18085.5560.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=67bp
QDAAKDSSRATLGQLAAKVQAEEKSRRTRAGMEDGVRNGDDNSTGGGGGG
DAGSDTNGEADSVAGGA
back to top