mRNA_Ecto-sp13_S_contig18072.5556.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig18072.5556.1 vs. uniprot
Match: A0A6H5KGL1_9PHAE (DDE-1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KGL1_9PHAE) HSP 1 Score: 221 bits (564), Expect = 1.610e-68 Identity = 117/180 (65.00%), Postives = 140/180 (77.78%), Query Frame = 1
Query: 1 TVVSTISANGDTFAPTMIFEGRRLEPDWL--NNGP*GARYACCTESSSMRTNAFMDYLKDFHKQLGGLGLLDGKPHILVLGDGLASREVVGSDAIRLAMDLNIVLFQLPPHTSHITQPLDVI---NFKREVTKVLSSFRLKNGGVLPQKHDIPGVIAEAWKSSFTPEQNKASFAAAGLWP 525
TVV+TISANG T+APT+IF+G+RL+PDW NGP ARY C T+SS M+ + F+ YLKDFHKQL G+LDGKPHILVL DG AS V + I+LAMDLNI+LF+LP HTSHITQPLDV+ FK+EVTKVL + NGG+LP K D+PGVIA AW++S TPE+NKASF AGLWP
Sbjct: 24 TVVTTISANGATWAPTIIFKGQRLQPDWFAERNGPKDARYTC-TDSSFMQGDVFIMYLKDFHKQLDDRGVLDGKPHILVL-DGHASH--VSYEFIKLAMDLNIILFKLPSHTSHITQPLDVVAFGTFKKEVTKVLQDYYHANGGLLPLKRDVPGVIAAAWQNSLTPERNKASFGGAGLWP 199
BLAST of mRNA_Ecto-sp13_S_contig18072.5556.1 vs. uniprot
Match: A0A6H5J9B8_9PHAE (DDE-1 domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J9B8_9PHAE) HSP 1 Score: 214 bits (545), Expect = 5.840e-66 Identity = 110/180 (61.11%), Postives = 132/180 (73.33%), Query Frame = 1
Query: 1 TVVSTISANGDTFAPTMIFEGRRLEPDWL--NNGP*GARYACCTESSSMRTNAFMDYLKDFHKQLGGLGLLDGKPHILVLGDGLASREVVGSDAIRLAMDLNIVLFQLPPHTSHITQPLDVI---NFKREVTKVLSSFRLKNGGVLPQKHDIPGVIAEAWKSSFTPEQNKASFAAAGLWP 525
TVV+TISANG T+APT+IF G+RL+PDW NGP ARY C T+SS M+ + F+ Y KDFHKQL G+LDGKPH LVL + V + I+LAM+LNI+LFQLP HTSHITQPLDV+ FK+EVT VL + NGG+LP K D+PGVIA AW+ SFTPE+NKASF GLWP
Sbjct: 24 TVVTTISANGATWAPTIIFRGQRLQPDWFAERNGPKDARYTC-TDSSFMQGDVFIKYFKDFHKQLDDRGVLDGKPHTLVLDE---HASYVSYEVIKLAMELNIILFQLPSHTSHITQPLDVVAFGTFKKEVTTVLQDYYHANGGLLPLKRDVPGVIAAAWQRSFTPERNKASFGGVGLWP 199
BLAST of mRNA_Ecto-sp13_S_contig18072.5556.1 vs. uniprot
Match: A0A6H5JV04_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JV04_9PHAE) HSP 1 Score: 218 bits (555), Expect = 1.970e-64 Identity = 115/180 (63.89%), Postives = 142/180 (78.89%), Query Frame = 1
Query: 1 TVVSTISANGDTFAPTMIFEGRRLEPDWL--NNGP*GARYACCTESSSMRTNAFMDYLKDFHKQLGGLGLLDGKPHILVLGDGLASREVVGSDAIRLAMDLNIVLFQLPPHTSHITQPLDVINF---KREVTKVLSSFRLKNGGVLPQKHDIPGVIAEAWKSSFTPEQNKASFAAAGLWP 525
T+V+TISA+G T+APT+IF+G+RL+PDW NGP ARY C T+SS M+ N F+ YLKDFH+QL GL+DGKPHIL+L DG AS V + I+LAM+LNIVLFQLP HTSHITQPLDV+ F KREVTKVLS + +GG+LPQK D+PGVIA AW ++FT E+N++SFA AGLWP
Sbjct: 202 TLVTTISADGSTWAPTIIFKGQRLQPDWFAEKNGPPDARYTC-TDSSFMQGNVFIKYLKDFHQQLCKRGLIDGKPHILLL-DGHASH--VSVEVIQLAMELNIVLFQLPSHTSHITQPLDVVAFGAFKREVTKVLSDYYRVSGGLLPQKRDVPGVIAAAWGATFTSERNRSSFAGAGLWP 377
BLAST of mRNA_Ecto-sp13_S_contig18072.5556.1 vs. uniprot
Match: A0A6H5KHG4_9PHAE (DDE-1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KHG4_9PHAE) HSP 1 Score: 213 bits (543), Expect = 2.650e-64 Identity = 114/180 (63.33%), Postives = 137/180 (76.11%), Query Frame = 1
Query: 1 TVVSTISANGDTFAPTMIFEGRRLEPDWL--NNGP*GARYACCTESSSMRTNAFMDYLKDFHKQLGGLGLLDGKPHILVLGDGLASREVVGSDAIRLAMDLNIVLFQLPPHTSHITQPLDVI---NFKREVTKVLSSFRLKNGGVLPQKHDIPGVIAEAWKSSFTPEQNKASFAAAGLWP 525
TVV+TIS NG T+APT+IF+G+RL+ DW NGP ARY C T+SS M+ + F+ YLKDF+KQL G+LDGKPHILVLG G AS +V + I+LAM+LNI+LFQLP HTSHITQPLDV+ FK+EVTKVL + NGG LP K D+P VIA AW+ SFTPE+NKASF AGLWP
Sbjct: 141 TVVTTISTNGVTWAPTIIFKGQRLQLDWFAERNGPKDARYTC-TDSSFMQGDVFIKYLKDFYKQLDDRGVLDGKPHILVLG-GHAS--LVSYEVIKLAMELNIILFQLPSHTSHITQPLDVVAFGTFKKEVTKVLQDYYHANGGSLPLKRDVPSVIAAAWQRSFTPERNKASFGGAGLWP 316
BLAST of mRNA_Ecto-sp13_S_contig18072.5556.1 vs. uniprot
Match: A0A6H5JIF7_9PHAE (DDE-1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JIF7_9PHAE) HSP 1 Score: 210 bits (534), Expect = 8.460e-64 Identity = 115/180 (63.89%), Postives = 138/180 (76.67%), Query Frame = 1
Query: 1 TVVSTISANGDTFAPTMIFEGRRLEPDWLN--NGP*GARYACCTESSSMRTNAFMDYLKDFHKQLGGLGLLDGKPHILVLGDGLASREVVGSDAIRLAMDLNIVLFQLPPHTSHITQPLDVI---NFKREVTKVLSSFRLKNGGVLPQKHDIPGVIAEAWKSSFTPEQNKASFAAAGLWP 525
TVV+TISA+G T+APT+IF+G+RL+ D NGP GARY C T SS M+ + + YLKDFHKQLG GLLDGKPH L+L DGLAS V + IRLAM+L +LFQLP HTSHITQPLDV+ FK+ VT+VL+ F +GG+LP K D+PGVIA+AWKSSFTPE NK+SFA AGLWP
Sbjct: 10 TVVATISADGHTWAPTIIFKGQRLQADGFEERNGPEGARYTC-TGSSFMQGDVLIAYLKDFHKQLGDRGLLDGKPHKLLL-DGLASH--VSVEVIRLAMNLKTILFQLPSHTSHITQPLDVVAFGRFKKSVTRVLAFFYHNSGGLLPLKCDMPGVIADAWKSSFTPEINKSSFAEAGLWP 185
BLAST of mRNA_Ecto-sp13_S_contig18072.5556.1 vs. uniprot
Match: A0A6H5JRA3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JRA3_9PHAE) HSP 1 Score: 211 bits (536), Expect = 1.270e-63 Identity = 113/180 (62.78%), Postives = 140/180 (77.78%), Query Frame = 1
Query: 1 TVVSTISANGDTFAPTMIFEGRRLEPDWL--NNGP*GARYACCTESSSMRTNAFMDYLKDFHKQLGGLGLLDGKPHILVLGDGLASREVVGSDAIRLAMDLNIVLFQLPPHTSHITQPLDVI---NFKREVTKVLSSFRLKNGGVLPQKHDIPGVIAEAWKSSFTPEQNKASFAAAGLWP 525
TVV+TISA+G T+APT+IF+G+RL+ DW NG GA+Y C T+ S M+ + F+ YLKDFHKQL GLLDGKPHIL+L DG AS V + I+LAM+L I+LFQLP HTSHITQPLDV+ +FK+ VT+VL+SF +GG+LP K D+PGVIA+AWK SFTPE NK+SFA AGLWP
Sbjct: 217 TVVATISADGHTWAPTIIFKGQRLQADWFVERNGLEGAKYTC-TDYSFMQGDLFIAYLKDFHKQLCDRGLLDGKPHILLL-DGHASH--VSVEVIKLAMNLKIILFQLPSHTSHITQPLDVVAFGSFKKSVTRVLASFYRNSGGLLPLKRDMPGVIADAWKLSFTPEINKSSFAGAGLWP 392
BLAST of mRNA_Ecto-sp13_S_contig18072.5556.1 vs. uniprot
Match: A0A6H5JYS0_9PHAE (DDE-1 domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JYS0_9PHAE) HSP 1 Score: 213 bits (541), Expect = 1.700e-63 Identity = 114/180 (63.33%), Postives = 137/180 (76.11%), Query Frame = 1
Query: 1 TVVSTISANGDTFAPTMIFEGRRLEPDWL--NNGP*GARYACCTESSSMRTNAFMDYLKDFHKQLGGLGLLDGKPHILVLGDGLASREVVGSDAIRLAMDLNIVLFQLPPHTSHITQPLDVI---NFKREVTKVLSSFRLKNGGVLPQKHDIPGVIAEAWKSSFTPEQNKASFAAAGLWP 525
TVV TISA+G T+APT+IF+G RL+ DW NGP GARY C T+SS M+ + F+ YLKDFHKQ G GLLDGKPHIL+L DG +S V + RLAM+L I+L QLP HTSHITQPLDV+ FK+ VT+VL+SF +GG+LP K D+PGVIA+AWK SFTPE NK+SFA AGLWP
Sbjct: 179 TVVVTISADGHTWAPTIIFKGHRLQADWFVERNGPEGARYTC-TDSSFMQGDVFIAYLKDFHKQFGERGLLDGKPHILLL-DGHSSHVRV--EVTRLAMNLKIILIQLPSHTSHITQPLDVVAFGRFKKSVTRVLASFYHNSGGLLPLKRDMPGVIADAWKLSFTPEINKSSFAGAGLWP 354
BLAST of mRNA_Ecto-sp13_S_contig18072.5556.1 vs. uniprot
Match: A0A6H5JJ12_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JJ12_9PHAE) HSP 1 Score: 218 bits (555), Expect = 4.060e-63 Identity = 115/180 (63.89%), Postives = 142/180 (78.89%), Query Frame = 1
Query: 1 TVVSTISANGDTFAPTMIFEGRRLEPDWL--NNGP*GARYACCTESSSMRTNAFMDYLKDFHKQLGGLGLLDGKPHILVLGDGLASREVVGSDAIRLAMDLNIVLFQLPPHTSHITQPLDVINF---KREVTKVLSSFRLKNGGVLPQKHDIPGVIAEAWKSSFTPEQNKASFAAAGLWP 525
T+V+TISA+G T+APT+IF+G+RL+PDW NGP ARY C T+SS M+ N F+ YLKDFH+QL GL+DGKPHIL+L DG AS V + I+LAM+LNIVLFQLP HTSHITQPLDV+ F KREVTKVLS + +GG+LPQK D+PGVIA AW ++FT E+N++SFA AGLWP
Sbjct: 443 TLVTTISADGSTWAPTIIFKGQRLQPDWFAEKNGPPDARYTC-TDSSFMQGNVFIKYLKDFHQQLCKRGLIDGKPHILLL-DGHASH--VSVEVIQLAMELNIVLFQLPSHTSHITQPLDVVAFGAFKREVTKVLSDYYRVSGGLLPQKRDVPGVIAAAWGATFTSERNRSSFAGAGLWP 618
BLAST of mRNA_Ecto-sp13_S_contig18072.5556.1 vs. uniprot
Match: A0A6H5JBS6_9PHAE (DDE-1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JBS6_9PHAE) HSP 1 Score: 209 bits (532), Expect = 5.950e-63 Identity = 113/180 (62.78%), Postives = 135/180 (75.00%), Query Frame = 1
Query: 1 TVVSTISANGDTFAPTMIFEGRRLEPDWL--NNGP*GARYACCTESSSMRTNAFMDYLKDFHKQLGGLGLLDGKPHILVLGDGLASREVVGSDAIRLAMDLNIVLFQLPPHTSHITQPLDVI---NFKREVTKVLSSFRLKNGGVLPQKHDIPGVIAEAWKSSFTPEQNKASFAAAGLWP 525
TVV+TISANG T+APT+IF+G+RL+PDW NGP ARY C T+SS M+ + F+ YLKDFHKQL G+LDGKPH LVL DG AS V + I+LAM+LNI+LFQLP HTSHITQPLDV+ FK+EVTKVL + NGG+LP K D+PGVIA AW+ S T E+N ASF AGL P
Sbjct: 198 TVVTTISANGATWAPTIIFKGQRLQPDWFAERNGPKDARYTC-TDSSFMQGDVFIKYLKDFHKQLDDRGVLDGKPHTLVL-DGHASH--VSYEVIKLAMELNIILFQLPSHTSHITQPLDVVAFGTFKKEVTKVLQDYYHANGGLLPLKRDVPGVIAAAWQRSLTLERNNASFGGAGLRP 373
BLAST of mRNA_Ecto-sp13_S_contig18072.5556.1 vs. uniprot
Match: A0A6H5KC91_9PHAE (DDE-1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KC91_9PHAE) HSP 1 Score: 206 bits (525), Expect = 2.450e-62 Identity = 111/177 (62.71%), Postives = 135/177 (76.27%), Query Frame = 1
Query: 1 TVVSTISANGDTFAPTMIFEGRRLEPDWL--NNGP*GARYACCTESSSMRTNAFMDYLKDFHKQLGGLGLLDGKPHILVLGDGLASREVVGSDAIRLAMDLNIVLFQLPPHTSHITQPLDVI---NFKREVTKVLSSFRLKNGGVLPQKHDIPGVIAEAWKSSFTPEQNKASFAAAG 516
TVV+TISANG T+APT+IF+G+RL+PDW NGP ARY C T+SS M+ + F++YLKDFHKQL G+LD KPHILVL DG AS V + I+LAM+LNI+LFQLP TSHITQPLDV+ FK+EVTKVL + NGG+LP K D+PGVIA AW+ SFTPE++KASF G
Sbjct: 24 TVVTTISANGATWAPTIIFKGQRLQPDWFAERNGPKDARYTC-TDSSFMQGDVFINYLKDFHKQLDDRGVLDRKPHILVL-DGHASH--VSYEVIKLAMELNIILFQLPSRTSHITQPLDVVAFGTFKKEVTKVLQDYCHANGGLLPPKRDVPGVIAAAWQRSFTPERHKASFGGRG 196 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig18072.5556.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig18072.5556.1 >prot_Ecto-sp13_S_contig18072.5556.1 ID=prot_Ecto-sp13_S_contig18072.5556.1|Name=mRNA_Ecto-sp13_S_contig18072.5556.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=129bp MRTNAFMDYLKDFHKQLGGLGLLDGKPHILVLGDGLASREVVGSDAIRLAback to top mRNA from alignment at Ecto-sp13_S_contig18072:1502..2026- Legend: UTRCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig18072.5556.1 ID=mRNA_Ecto-sp13_S_contig18072.5556.1|Name=mRNA_Ecto-sp13_S_contig18072.5556.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=525bp|location=Sequence derived from alignment at Ecto-sp13_S_contig18072:1502..2026- (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig18072:1502..2026- >mRNA_Ecto-sp13_S_contig18072.5556.1 ID=mRNA_Ecto-sp13_S_contig18072.5556.1|Name=mRNA_Ecto-sp13_S_contig18072.5556.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=387bp|location=Sequence derived from alignment at Ecto-sp13_S_contig18072:1502..2026- (Ectocarpus species13 EcNAP12_S_4_19m)back to top |