prot_Ecto-sp13_S_contig18054.5544.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig18054.5544.1
Unique Nameprot_Ecto-sp13_S_contig18054.5544.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length277
Homology
BLAST of mRNA_Ecto-sp13_S_contig18054.5544.1 vs. uniprot
Match: A0A6H5KU08_9PHAE (HIT-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KU08_9PHAE)

HSP 1 Score: 368 bits (944), Expect = 7.220e-120
Identity = 210/240 (87.50%), Postives = 213/240 (88.75%), Query Frame = 0
Query:    1 MTAGVQGKKDAKDKDNELRVLVPGRAGAEGEGATLAAAGTGRGGRVCSVCARASADYSCPRCLVGYCSSKCYKVHGSGCTEAFFRGHVERETRLREGDEVERGSGVKGPKAGRRASMVEVLRRIRITDRGDDGNGDVGPHAEEGEVGEDEDEELMFQPERLDALALALKDRGHALPAKSSSFSXXXXXXXXXXXXXXXXXXXXITASS----ANTVTVDPAAVKVNASRGSKIGRSLPSS 236
            M AGVQGKKDAKDKDNELRV+VP RAGAEG+GATLAAAG GRGGRVCSVCARASADYSCPRCLVGYCSSKCYKVHGSGCTEAFFRGHVERETRLREGDEVERGSGVKGPKAGRRASMVEVLRRIR+TDRG DGNG  GPHAEEGEVGEDED ELMFQPERLDALALALKDRGHALP KSSSFS         XXXXXXXXXXX         ANTV VDPAAVKVNASRGSKIGRSLPSS
Sbjct:   58 MAAGVQGKKDAKDKDNELRVVVPVRAGAEGQGATLAAAGAGRGGRVCSVCARASADYSCPRCLVGYCSSKCYKVHGSGCTEAFFRGHVERETRLREGDEVERGSGVKGPKAGRRASMVEVLRRIRLTDRGGDGNGGAGPHAEEGEVGEDEDGELMFQPERLDALALALKDRGHALPVKSSSFSADSPSTAAAXXXXXXXXXXXXXXXXXXXXANTVIVDPAAVKVNASRGSKIGRSLPSS 297          
BLAST of mRNA_Ecto-sp13_S_contig18054.5544.1 vs. uniprot
Match: D8LQD6_ECTSI (HIT-type domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LQD6_ECTSI)

HSP 1 Score: 258 bits (660), Expect = 3.240e-79
Identity = 132/146 (90.41%), Postives = 136/146 (93.15%), Query Frame = 0
Query:    1 MTAGVQGKKDAKDKDNELRVLVPGRAGAEGEGATLAAAGTGRGGRVCSVCARASADYSCPRCLVGYCSSKCYKVHGSGCTEAFFRGHVERETRLREGDEVERGSGVKGPKAGRRASMVEVLRRIRITDRGDDGNGDVGPHAEEGEV 146
            M AGVQGKKDAKDK+NEL+V+V GRA AEGE  TLAAAG GRGGRVCSVCARASADYSCPRCLVGYCSSKCYKVHGSGCTEAFFRGHVERETRLREGDEVERGSGVKGPKAGRRASMVEVLRRIR+TDRG DGNG   PHAEEGEV
Sbjct:    1 MAAGVQGKKDAKDKNNELKVVVRGRARAEGEDVTLAAAGAGRGGRVCSVCARASADYSCPRCLVGYCSSKCYKVHGSGCTEAFFRGHVERETRLREGDEVERGSGVKGPKAGRRASMVEVLRRIRLTDRGGDGNGGDDPHAEEGEV 146          
BLAST of mRNA_Ecto-sp13_S_contig18054.5544.1 vs. uniprot
Match: A0A7S2LAJ1_9DINO (Hypothetical protein (Fragment) n=1 Tax=Brandtodinium nutricula TaxID=1333877 RepID=A0A7S2LAJ1_9DINO)

HSP 1 Score: 72.4 bits (176), Expect = 1.020e-11
Identity = 29/57 (50.88%), Postives = 39/57 (68.42%), Query Frame = 0
Query:   46 VCSVCARASADYSCPRCLVGYCSSKCYKVHGSGCTEAFFRGHVERETRLREGDEVER 102
            +C VC RA+A Y+CPRC +GYCS  CYK HG  CTE+F++  VE + R +    +ER
Sbjct:    5 ICGVCTRAAAQYTCPRCQLGYCSLSCYKGHGDQCTESFYKAQVEEQLRSQRASGIER 61          
BLAST of mRNA_Ecto-sp13_S_contig18054.5544.1 vs. uniprot
Match: A0A7S3V1P5_9STRA (Hypothetical protein n=1 Tax=Aplanochytrium stocchinoi TaxID=215587 RepID=A0A7S3V1P5_9STRA)

HSP 1 Score: 73.2 bits (178), Expect = 4.730e-11
Identity = 42/117 (35.90%), Postives = 65/117 (55.56%), Query Frame = 0
Query:   45 RVCSVCARASADYSCPRCLVGYCSSKCYKVHGSGCTEAFFRGHVERETRLREGDEVERGSGVKGPKAGRRASMVEVLRRIRITDRGDDGNGDVGPHAEEGEVGEDEDEELMFQPERL 161
            R+C VCAR  + Y CP+C V YC+  CY+ HG+GCTE FF+ HV+ E  LR+ +        K   + +R   +++L+R R     D          +EG   E+E+E+L+ + E+L
Sbjct:    7 RICQVCARKESKYKCPKCNVSYCTVDCYRSHGTGCTEKFFKKHVKDEMSLRKHEN-------KNLLSKQRLETMKMLQRNRSQFDDD---------CDEGSYEEEEEEDLVERLEKL 107          
BLAST of mRNA_Ecto-sp13_S_contig18054.5544.1 vs. uniprot
Match: A0A835WTC3_9CHLO (HIT-type domain-containing protein n=1 Tax=Chlamydomonas schloesseri TaxID=2026947 RepID=A0A835WTC3_9CHLO)

HSP 1 Score: 73.6 bits (179), Expect = 4.830e-11
Identity = 37/82 (45.12%), Postives = 50/82 (60.98%), Query Frame = 0
Query:   45 RVCSVCARASADYSCPRCLVGYCSSKCYKVHGSGCTEAFFRGHVERETR-LREGDEVERGSGVKGPKAGRRASMVEVLRRIR 125
            R+C VCAR  A Y+CPRC +GYCS  CYK HG  CTE+F++     E + +R GDE             +R +MVE+LRR++
Sbjct:    7 RICRVCARQYARYTCPRCNIGYCSLPCYKQHGEHCTESFYKEQAVGELQAVRAGDE-------------QRRAMVEILRRVQ 75          
BLAST of mRNA_Ecto-sp13_S_contig18054.5544.1 vs. uniprot
Match: A0A8J5XQ31_DIALT (HIT-type domain-containing protein n=1 Tax=Diacronema lutheri TaxID=2081491 RepID=A0A8J5XQ31_DIALT)

HSP 1 Score: 72.8 bits (177), Expect = 6.150e-11
Identity = 51/140 (36.43%), Postives = 65/140 (46.43%), Query Frame = 0
Query:   45 RVCSVCARASADYSCPRCLVGYCSSKCYKVHGSGCTEAFFRGHVERETRLREGDEVERGSGVKGPKAGRRASMVEVLRRIR---ITDRGDDGNGDVGPHAEEGEVGEDEDEELMFQPERLDALALALKDRGHALPAKSSS 181
            RVCSVCAR  A Y+CPRC V  CS  CY+ HG+ CT+AF R   +              S  +   A  +  M ++LRR+R   + D G DG G   P AE                    A ALA + R HAL A +S+
Sbjct:    9 RVCSVCAREFAKYTCPRCAVQSCSLACYRTHGAACTDAFQRDQAQ--------------SAARAECAPAKDEMEDILRRVRAQTLDDGGPDGGGSSDPVAEA-------------------AAALAHERRVHALQALASA 115          
BLAST of mRNA_Ecto-sp13_S_contig18054.5544.1 vs. uniprot
Match: A0A024TRU8_9STRA (HIT-type domain-containing protein n=1 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024TRU8_9STRA)

HSP 1 Score: 68.9 bits (167), Expect = 7.940e-10
Identity = 28/50 (56.00%), Postives = 34/50 (68.00%), Query Frame = 0
Query:   45 RVCSVCARASADYSCPRCLVGYCSSKCYKVHGSGCTEAFFRGHVERETRL 94
            RVC VC    + Y+CPRC   YC   CYK HG+ CTEAF++GHV+ E RL
Sbjct:   48 RVCGVCQANESKYTCPRCNAVYCGVACYKTHGTTCTEAFYKGHVQSEMRL 97          
BLAST of mRNA_Ecto-sp13_S_contig18054.5544.1 vs. uniprot
Match: A0A3R6YXS0_9STRA (HIT-type domain-containing protein n=1 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A3R6YXS0_9STRA)

HSP 1 Score: 68.9 bits (167), Expect = 1.220e-9
Identity = 28/50 (56.00%), Postives = 34/50 (68.00%), Query Frame = 0
Query:   45 RVCSVCARASADYSCPRCLVGYCSSKCYKVHGSGCTEAFFRGHVERETRL 94
            RVC VC    + Y+CPRC   YC   CYK HG+ CTEAF++GHV+ E RL
Sbjct:   48 RVCGVCQANESKYTCPRCNAVYCGVACYKTHGTTCTEAFYKGHVQSEMRL 97          
BLAST of mRNA_Ecto-sp13_S_contig18054.5544.1 vs. uniprot
Match: A0A2K3DHW8_CHLRE (HIT-type domain-containing protein n=1 Tax=Chlamydomonas reinhardtii TaxID=3055 RepID=A0A2K3DHW8_CHLRE)

HSP 1 Score: 68.9 bits (167), Expect = 1.660e-9
Identity = 35/80 (43.75%), Postives = 47/80 (58.75%), Query Frame = 0
Query:   45 RVCSVCARASADYSCPRCLVGYCSSKCYKVHGSGCTEAFFRGHVERE-TRLREGDEVERGSGVKGPKAGRRASMVEVLRR 123
            R+C VCAR  A Y+CPRC +GYCS  CYK HG  CTE+F++     E   +R GDE             +R +M+++LRR
Sbjct:    7 RICRVCARQYARYTCPRCNIGYCSLPCYKQHGEHCTESFYKEQAVGELVSVRAGDE-------------QRRAMLDILRR 73          
BLAST of mRNA_Ecto-sp13_S_contig18054.5544.1 vs. uniprot
Match: A0A835SV82_CHLIN (HIT-type domain-containing protein n=1 Tax=Chlamydomonas incerta TaxID=51695 RepID=A0A835SV82_CHLIN)

HSP 1 Score: 68.9 bits (167), Expect = 1.660e-9
Identity = 35/82 (42.68%), Postives = 47/82 (57.32%), Query Frame = 0
Query:   45 RVCSVCARASADYSCPRCLVGYCSSKCYKVHGSGCTEAFFRGHVERETR-LREGDEVERGSGVKGPKAGRRASMVEVLRRIR 125
            R+C VCAR  A Y+CPRC +GYCS  CYK HG  CTE+F++     E + +  GDE  RG             M+E+L+R +
Sbjct:    7 RICRVCARQYARYTCPRCNIGYCSLPCYKQHGEHCTESFYKEQAVGELQSVSAGDEQRRG-------------MLEILKRAQ 75          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig18054.5544.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 16
Match NameE-valueIdentityDescription
A0A6H5KU08_9PHAE7.220e-12087.50HIT-type domain-containing protein n=1 Tax=Ectocar... [more]
D8LQD6_ECTSI3.240e-7990.41HIT-type domain-containing protein n=1 Tax=Ectocar... [more]
A0A7S2LAJ1_9DINO1.020e-1150.88Hypothetical protein (Fragment) n=1 Tax=Brandtodin... [more]
A0A7S3V1P5_9STRA4.730e-1135.90Hypothetical protein n=1 Tax=Aplanochytrium stocch... [more]
A0A835WTC3_9CHLO4.830e-1145.12HIT-type domain-containing protein n=1 Tax=Chlamyd... [more]
A0A8J5XQ31_DIALT6.150e-1136.43HIT-type domain-containing protein n=1 Tax=Diacron... [more]
A0A024TRU8_9STRA7.940e-1056.00HIT-type domain-containing protein n=1 Tax=Aphanom... [more]
A0A3R6YXS0_9STRA1.220e-956.00HIT-type domain-containing protein n=1 Tax=Aphanom... [more]
A0A2K3DHW8_CHLRE1.660e-943.75HIT-type domain-containing protein n=1 Tax=Chlamyd... [more]
A0A835SV82_CHLIN1.660e-942.68HIT-type domain-containing protein n=1 Tax=Chlamyd... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.30.60.190coord: 34..89
e-value: 5.5E-14
score: 53.6
NoneNo IPR availableSUPERFAMILY144232HIT/MYND zinc finger-likecoord: 45..78
IPR007529Zinc finger, HIT-typePFAMPF04438zf-HITcoord: 46..73
e-value: 2.3E-6
score: 27.4
IPR007529Zinc finger, HIT-typePROSITEPS51083ZF_HITcoord: 47..79
score: 9.65
IPR039646Zinc finger HIT domain-containing protein 2PANTHERPTHR15555ZINC FINGER HIT DOMAIN CONTAINING PROTEIN 2 PROTEIN FON -RELATEDcoord: 44..162

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig18054contigEcto-sp13_S_contig18054:677..2951 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig18054.5544.1mRNA_Ecto-sp13_S_contig18054.5544.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig18054 666..2951 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig18054.5544.1 ID=prot_Ecto-sp13_S_contig18054.5544.1|Name=mRNA_Ecto-sp13_S_contig18054.5544.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=277bp
MTAGVQGKKDAKDKDNELRVLVPGRAGAEGEGATLAAAGTGRGGRVCSVC
ARASADYSCPRCLVGYCSSKCYKVHGSGCTEAFFRGHVERETRLREGDEV
ERGSGVKGPKAGRRASMVEVLRRIRITDRGDDGNGDVGPHAEEGEVGEDE
DEELMFQPERLDALALALKDRGHALPAKSSSFSAKSPSTAAAAAAAAVAT
AAGITASSANTVTVDPAAVKVNASRGSKIGRSLPSSSSSSSSSSSSDARA
PSSSNRRGVVAGGGGKLPRRGSRRAQQ
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR007529Znf_HIT
IPR039646ZNHIT2