prot_Ecto-sp13_S_contig1805.5543.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig1805.5543.1
Unique Nameprot_Ecto-sp13_S_contig1805.5543.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length36
Homology
BLAST of mRNA_Ecto-sp13_S_contig1805.5543.1 vs. uniprot
Match: D7FUR8_ECTSI (Nitrate high affinity transporter n=4 Tax=Ectocarpus TaxID=2879 RepID=D7FUR8_ECTSI)

HSP 1 Score: 80.1 bits (196), Expect = 1.330e-16
Identity = 36/36 (100.00%), Postives = 36/36 (100.00%), Query Frame = 0
Query:    1 MSDWKKYDSYDVPIDPKQQDKATMFKLYSFRRPHMR 36
            MSDWKKYDSYDVPIDPKQQDKATMFKLYSFRRPHMR
Sbjct:    1 MSDWKKYDSYDVPIDPKQQDKATMFKLYSFRRPHMR 36          
BLAST of mRNA_Ecto-sp13_S_contig1805.5543.1 vs. uniprot
Match: D7FUS1_ECTSI (Nitrate/nitrite transporter n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FUS1_ECTSI)

HSP 1 Score: 74.3 bits (181), Expect = 1.490e-14
Identity = 33/36 (91.67%), Postives = 34/36 (94.44%), Query Frame = 0
Query:    1 MSDWKKYDSYDVPIDPKQQDKATMFKLYSFRRPHMR 36
            MSDWKKYD+YDVPIDPKQQDKAT  KLYSFRRPHMR
Sbjct:    1 MSDWKKYDTYDVPIDPKQQDKATTLKLYSFRRPHMR 36          
BLAST of mRNA_Ecto-sp13_S_contig1805.5543.1 vs. uniprot
Match: A0A835YQD5_9STRA (Nitrate high affinity transporter n=2 Tax=Tribonema minus TaxID=303371 RepID=A0A835YQD5_9STRA)

HSP 1 Score: 57.0 bits (136), Expect = 1.940e-8
Identity = 24/33 (72.73%), Postives = 28/33 (84.85%), Query Frame = 0
Query:    4 WKKYDSYDVPIDPKQQDKATMFKLYSFRRPHMR 36
            WKKYDSYD+ +DPKQ D+AT FKL +F RPHMR
Sbjct:   11 WKKYDSYDLDVDPKQDDRATEFKLSTFSRPHMR 43          
BLAST of mRNA_Ecto-sp13_S_contig1805.5543.1 vs. uniprot
Match: A0A812ST29_9DINO (Nitrate/nitrite transporter n=2 Tax=Symbiodinium natans TaxID=878477 RepID=A0A812ST29_9DINO)

HSP 1 Score: 53.5 bits (127), Expect = 3.240e-7
Identity = 22/33 (66.67%), Postives = 27/33 (81.82%), Query Frame = 0
Query:    4 WKKYDSYDVPIDPKQQDKATMFKLYSFRRPHMR 36
            WKKY++YD  +DPKQ D+AT  KL SF+RPHMR
Sbjct:   28 WKKYETYDCEVDPKQGDRATKIKLLSFKRPHMR 60          
BLAST of mRNA_Ecto-sp13_S_contig1805.5543.1 vs. uniprot
Match: A0A1E7ES31_9STRA (Nitrate/nitrite transporter n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7ES31_9STRA)

HSP 1 Score: 49.7 bits (117), Expect = 7.410e-6
Identity = 20/34 (58.82%), Postives = 26/34 (76.47%), Query Frame = 0
Query:    3 DWKKYDSYDVPIDPKQQDKATMFKLYSFRRPHMR 36
            +WKKY+ Y++ +DP Q DKAT  KL S +RPHMR
Sbjct:   20 EWKKYEDYNIEVDPDQDDKATRIKLGSLKRPHMR 53          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig1805.5543.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 5
Match NameE-valueIdentityDescription
D7FUR8_ECTSI1.330e-16100.00Nitrate high affinity transporter n=4 Tax=Ectocarp... [more]
D7FUS1_ECTSI1.490e-1491.67Nitrate/nitrite transporter n=2 Tax=Ectocarpus Tax... [more]
A0A835YQD5_9STRA1.940e-872.73Nitrate high affinity transporter n=2 Tax=Tribonem... [more]
A0A812ST29_9DINO3.240e-766.67Nitrate/nitrite transporter n=2 Tax=Symbiodinium n... [more]
A0A1E7ES31_9STRA7.410e-658.82Nitrate/nitrite transporter n=1 Tax=Fragilariopsis... [more]
back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig1805contigEcto-sp13_S_contig1805:14414..15680 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig1805.5543.1mRNA_Ecto-sp13_S_contig1805.5543.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig1805 14204..15680 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig1805.5543.1 ID=prot_Ecto-sp13_S_contig1805.5543.1|Name=mRNA_Ecto-sp13_S_contig1805.5543.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=36bp
MSDWKKYDSYDVPIDPKQQDKATMFKLYSFRRPHMR
back to top