prot_Ecto-sp13_S_contig1805.5541.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_Ecto-sp13_S_contig1805.5541.1
Unique Name	prot_Ecto-sp13_S_contig1805.5541.1
Type	polypeptide
Organism	Ectocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length	177

Homology

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BLAST of mRNA_Ecto-sp13_S_contig1805.5541.1 vs. uniprot
Match: D7FUR6_ECTSI (Glycerol-3-phosphate dehydrogenase [NAD(+)] n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FUR6_ECTSI)

HSP 1 Score: 310 bits (795), Expect = 1.390e-102
Identity = 163/176 (92.61%), Postives = 165/176 (93.75%), Query Frame = 0

Query:    1 MADTGAGIAYAYADESMSMGSMTSCESLLDADLGGAPRQALGVGEGAAPERVAIVGSGNWGSAIARIVGRNVTEQEGFEHQIRQWVFPEKVSHNGVEACLTEVINKEHENVKYLPGVKLPENLVAEGDLALAVKDATILIFVLPHQFLGRVLPTVAEALGLTKTGSNPGVARDGRR 176
            MADTGAGIA A+ADESMSMGSMTSCESLLDADLGGA RQ LG G GAAPERVAIVGSGNWGSAIARIVGRNV EQEGFEHQIRQWVFPEKVSHNGVEACLTEVINKEHENVKYLPGVKLPENLVAEGDLALAVKDATILIFVLPHQFLGRVLPTVAEALGLTK+G   GVA  GRR
Sbjct:    1 MADTGAGIASAHADESMSMGSMTSCESLLDADLGGASRQPLGGGGGAAPERVAIVGSGNWGSAIARIVGRNVIEQEGFEHQIRQWVFPEKVSHNGVEACLTEVINKEHENVKYLPGVKLPENLVAEGDLALAVKDATILIFVLPHQFLGRVLPTVAEALGLTKSGGTAGVAPGGRR 176

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BLAST of mRNA_Ecto-sp13_S_contig1805.5541.1 vs. uniprot
Match: A0A6H5JZY6_9PHAE (Glycerol-3-phosphate dehydrogenase [NAD(+)] n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JZY6_9PHAE)

HSP 1 Score: 290 bits (743), Expect = 6.060e-95
Identity = 149/160 (93.12%), Postives = 151/160 (94.38%), Query Frame = 0

Query:   17 MSMGSMTSCESLLDADLGGAPRQALGVGEGAAPERVAIVGSGNWGSAIARIVGRNVTEQEGFEHQIRQWVFPEKVSHNGVEACLTEVINKEHENVKYLPGVKLPENLVAEGDLALAVKDATILIFVLPHQFLGRVLPTVAEALGLTKTGSNPGVARDGRR 176
            MSMGSMTSCESLLDADLGGAPRQ LG G GAAPERVAIVGSGNWGSAIARIVGRNV EQEGFEHQIRQWVFPEKVSHNGVEACLTEVIN+EHENVKYLPGVKLPENLVAEGDLALAVKDATILIFVLPHQFLGRVLPTVAEALGLTK+G N G A  GRR
Sbjct:    1 MSMGSMTSCESLLDADLGGAPRQVLGGGGGAAPERVAIVGSGNWGSAIARIVGRNVIEQEGFEHQIRQWVFPEKVSHNGVEACLTEVINREHENVKYLPGVKLPENLVAEGDLALAVKDATILIFVLPHQFLGRVLPTVAEALGLTKSGGNAGAAPGGRR 160

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BLAST of mRNA_Ecto-sp13_S_contig1805.5541.1 vs. uniprot
Match: A0A8J9SPK1_PHATR (Hypothetical protein (Fragment) n=1 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=A0A8J9SPK1_PHATR)

HSP 1 Score: 132 bits (332), Expect = 1.700e-36
Identity = 67/117 (57.26%), Postives = 82/117 (70.09%), Query Frame = 0

Query:   50 ERVAIVGSGNWGSAIARIVGRNVTEQEGFEHQIRQWVFPEKVS-HNGVEACLTEVINKEHENVKYLPGVKLPENLVAEGDLALAVKDATILIFVLPHQFLGRVLPTVAEALGLTKTG 165
            ++V I+GSGNWGSAIA +VGRN      FE Q+  WVF E V   +G +  LTE+IN  HENVKYLPG+ LP N+VA  DLA A +DAT+LIFVLPHQFL R+LP + E+   T  G
Sbjct:   13 DKVCIIGSGNWGSAIATLVGRNCERLPFFESQVNMWVFEEMVELEDGSQKKLTEIINSRHENVKYLPGIPLPSNIVATPDLAEACRDATLLIFVLPHQFLPRLLPVIRESAHPTCRG 129

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BLAST of mRNA_Ecto-sp13_S_contig1805.5541.1 vs. uniprot
Match: A0A7S2HPY0_9EUKA (Glycerol-3-phosphate dehydrogenase [NAD(+)] n=1 Tax=Haptolina brevifila TaxID=156173 RepID=A0A7S2HPY0_9EUKA)

HSP 1 Score: 132 bits (332), Expect = 5.410e-34
Identity = 65/111 (58.56%), Postives = 84/111 (75.68%), Query Frame = 0

Query:   46 GAAPERVAIVGSGNWGSAIARIVGRNVTEQEGFEHQIRQWVFPEKVSHNGVEACLTEVINKEHENVKYLPGVKLPENLVAEGDLALAVKDATILIFVLPHQFLGRVLPTVA 156
            G   E+V IVGSGNWGSAIA+IVGRNV +++ FE +++ WVF E+V        LT++IN EHENVKYLP +K  EN+VA+ DLA AV  +T+LIFVLPHQFLGR+ P ++
Sbjct:   27 GGKKEKVTIVGSGNWGSAIAKIVGRNVLDRDEFEDEVKMWVFQEQVDGKN----LTDIINTEHENVKYLPDIKFTENVVADPDLASAVAGSTLLIFVLPHQFLGRICPQMS 133

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BLAST of mRNA_Ecto-sp13_S_contig1805.5541.1 vs. uniprot
Match: A0A7S0EXZ6_9EUKA (Glycerol-3-phosphate dehydrogenase [NAD(+)] n=1 Tax=Phaeocystis antarctica TaxID=33657 RepID=A0A7S0EXZ6_9EUKA)

HSP 1 Score: 132 bits (331), Expect = 7.580e-34
Identity = 64/104 (61.54%), Postives = 80/104 (76.92%), Query Frame = 0

Query:   50 ERVAIVGSGNWGSAIARIVGRNVTEQEGFEHQIRQWVFPEKVSHNGVEACLTEVINKEHENVKYLPGVKLPENLVAEGDLALAVKDATILIFVLPHQFLGRVLP 153
            E+V I+GSGNWGSAIA+IVGRNV +++ FE ++  WVF E V        LT++IN EHENVKYLPGVK  +N+VA+ DL  AV+ AT+LIFVLPHQFLGR+ P
Sbjct:   31 EKVCIIGSGNWGSAIAKIVGRNVLDRDQFEDEVTMWVFQENVDGKN----LTDIINNEHENVKYLPGVKFTDNVVADPDLTNAVQGATLLIFVLPHQFLGRICP 130

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BLAST of mRNA_Ecto-sp13_S_contig1805.5541.1 vs. uniprot
Match: A0A7S0EYM2_9EUKA (Glycerol-3-phosphate dehydrogenase [NAD(+)] n=1 Tax=Phaeocystis antarctica TaxID=33657 RepID=A0A7S0EYM2_9EUKA)

HSP 1 Score: 132 bits (331), Expect = 9.590e-34
Identity = 64/104 (61.54%), Postives = 80/104 (76.92%), Query Frame = 0

Query:   50 ERVAIVGSGNWGSAIARIVGRNVTEQEGFEHQIRQWVFPEKVSHNGVEACLTEVINKEHENVKYLPGVKLPENLVAEGDLALAVKDATILIFVLPHQFLGRVLP 153
            E+V I+GSGNWGSAIA+IVGRNV +++ FE ++  WVF E V        LT++IN EHENVKYLPGVK  +N+VA+ DL  AV+ AT+LIFVLPHQFLGR+ P
Sbjct:   31 EKVCIIGSGNWGSAIAKIVGRNVLDRDQFEDEVTMWVFQENVDGKN----LTDIINNEHENVKYLPGVKFTDNVVADPDLTNAVQGATLLIFVLPHQFLGRICP 130

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BLAST of mRNA_Ecto-sp13_S_contig1805.5541.1 vs. uniprot
Match: B5Y3R9_PHATC (Glycerol-3-phosphate dehydrogenase [NAD(+)] n=1 Tax=Phaeodactylum tricornutum (strain CCAP 1055/1) TaxID=556484 RepID=B5Y3R9_PHATC)

HSP 1 Score: 132 bits (331), Expect = 1.070e-33
Identity = 67/117 (57.26%), Postives = 82/117 (70.09%), Query Frame = 0

Query:   50 ERVAIVGSGNWGSAIARIVGRNVTEQEGFEHQIRQWVFPEKVS-HNGVEACLTEVINKEHENVKYLPGVKLPENLVAEGDLALAVKDATILIFVLPHQFLGRVLPTVAEALGLTKTG 165
            ++V I+GSGNWGSAIA +VGRN      FE Q+  WVF E V   +G +  LTE+IN  HENVKYLPG+ LP N+VA  DLA A +DAT+LIFVLPHQFL R+LP + E+   T  G
Sbjct:   13 DKVCIIGSGNWGSAIATLVGRNCERLPFFESQVNMWVFEEMVELEDGSQKKLTEIINSRHENVKYLPGIPLPSNVVATPDLAEACRDATLLIFVLPHQFLPRLLPVIRESAHPTCRG 129

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BLAST of mRNA_Ecto-sp13_S_contig1805.5541.1 vs. uniprot
Match: A0A2D4BLG9_PYTIN (Glycerol-3-phosphate dehydrogenase [NAD(+)] n=2 Tax=Pythium TaxID=4797 RepID=A0A2D4BLG9_PYTIN)

HSP 1 Score: 129 bits (325), Expect = 3.590e-33
Identity = 70/113 (61.95%), Postives = 85/113 (75.22%), Query Frame = 0

Query:   50 ERVAIVGSGNWGSAIARIVGRNVTEQ-EGFEHQIRQWVFPEKVSHNGVEACLTEVINKEHENVKYLPGVKLPENLVAEGDLALAVKDATILIFVLPHQFLGRVLPTVAEALGL 161
            ++V ++GSGNWGSAIARI+G N     + F+  I  WVF E+V  NG +  LTE+IN EHENVKYLPG KLPEN++A  DL  AVKDA ILIF LPHQFLGR+LPT+ +A GL
Sbjct:    3 KKVCLIGSGNWGSAIARIIGENTQRMPDVFQRDIPMWVFEEEV--NGRK--LTEIINTEHENVKYLPGYKLPENIIAVPDLLTAVKDADILIFCLPHQFLGRMLPTI-KAQGL 110

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BLAST of mRNA_Ecto-sp13_S_contig1805.5541.1 vs. uniprot
Match: Q567A1_DANRE (Glycerol-3-phosphate dehydrogenase [NAD(+)] n=24 Tax=Cyprinoidei TaxID=30727 RepID=Q567A1_DANRE)

HSP 1 Score: 129 bits (325), Expect = 4.270e-33
Identity = 70/119 (58.82%), Postives = 84/119 (70.59%), Query Frame = 0

Query:   49 PERVAIVGSGNWGSAIARIVGRNVTEQEGFEHQIRQWVFPEKVSHNGVEACLTEVINKEHENVKYLPGVKLPENLVAEGDLALAVKDATILIFVLPHQFLGRVLPTV-----AEALGLT 162
            P+RV IVGSGNWGSAIA+IVG N      F+  +  WVF E V  NG +  LTE+IN EHENVKYLPG KLPEN+VA  DL  A K A IL+FV+PHQF+GRV  T+     A+ALG++
Sbjct:    4 PKRVCIVGSGNWGSAIAKIVGANARNNSKFDSTVNMWVFEEMV--NGRK--LTEIINTEHENVKYLPGHKLPENVVAVADLVEAAKSADILLFVIPHQFIGRVCDTMKGKIKADALGMS 118

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BLAST of mRNA_Ecto-sp13_S_contig1805.5541.1 vs. uniprot
Match: A0A0S7KQL8_9TELE (GPDA (Fragment) n=1 Tax=Poeciliopsis prolifica TaxID=188132 RepID=A0A0S7KQL8_9TELE)

HSP 1 Score: 125 bits (315), Expect = 8.470e-33
Identity = 67/121 (55.37%), Postives = 88/121 (72.73%), Query Frame = 0

Query:   47 AAPERVAIVGSGNWGSAIARIVGRNVTEQEGFEHQIRQWVFPEKVSHNGVEACLTEVINKEHENVKYLPGVKLPENLVAEGDLALAVKDATILIFVLPHQFLGRVLPTV-----AEALGLT 162
            AAP++V IVGSGNWGSAIA+IVG NV +   F++ ++ WVF E V  NG +  LTE+IN  HENVKYLPG KLP N++A  DL  A  DA IL+FV+PHQF+G+V  T+     ++ALG++
Sbjct:   17 AAPKKVCIVGSGNWGSAIAKIVGANVAQNPKFDNTVKMWVFEETV--NGRK--LTEIINTSHENVKYLPGHKLPTNVLAVPDLVEASSDADILVFVIPHQFIGKVCNTMKGKVKSDALGIS 133

The following BLAST results are available for this feature:

BLAST of mRNA_Ecto-sp13_S_contig1805.5541.1 vs. uniprot

BLAST of mRNA_Ecto-sp13_S_contig1805.5541.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
D7FUR6_ECTSI	1.390e-102	92.61	Glycerol-3-phosphate dehydrogenase [NAD(+)] n=1 Ta...	[more]
A0A6H5JZY6_9PHAE	6.060e-95	93.13	Glycerol-3-phosphate dehydrogenase [NAD(+)] n=1 Ta...	[more]
A0A8J9SPK1_PHATR	1.700e-36	57.26	Hypothetical protein (Fragment) n=1 Tax=Phaeodacty...	[more]
A0A7S2HPY0_9EUKA	5.410e-34	58.56	Glycerol-3-phosphate dehydrogenase [NAD(+)] n=1 Ta...	[more]
A0A7S0EXZ6_9EUKA	7.580e-34	61.54	Glycerol-3-phosphate dehydrogenase [NAD(+)] n=1 Ta...	[more]
A0A7S0EYM2_9EUKA	9.590e-34	61.54	Glycerol-3-phosphate dehydrogenase [NAD(+)] n=1 Ta...	[more]
B5Y3R9_PHATC	1.070e-33	57.26	Glycerol-3-phosphate dehydrogenase [NAD(+)] n=1 Ta...	[more]
A0A2D4BLG9_PYTIN	3.590e-33	61.95	Glycerol-3-phosphate dehydrogenase [NAD(+)] n=2 Ta...	[more]
Q567A1_DANRE	4.270e-33	58.82	Glycerol-3-phosphate dehydrogenase [NAD(+)] n=24 T...	[more]
A0A0S7KQL8_9TELE	8.470e-33	55.37	GPDA (Fragment) n=1 Tax=Poeciliopsis prolifica Tax...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR006168	Glycerol-3-phosphate dehydrogenase, NAD-dependent	PRINTS	PR00077	GPDHDRGNASE	coord: 54..71 score: 67.85 coord: 120..147 score: 50.65
IPR011128	Glycerol-3-phosphate dehydrogenase, NAD-dependent, N-terminal	PFAM	PF01210	NAD_Gly3P_dh_N	coord: 52..159 e-value: 2.9E-27 score: 95.6
None	No IPR available	GENE3D	3.40.50.720		coord: 39..168 e-value: 3.1E-40 score: 139.7
None	No IPR available	PANTHER	PTHR11728	GLYCEROL-3-PHOSPHATE DEHYDROGENASE	coord: 47..152
None	No IPR available	PANTHER	PTHR11728:SF8	GLYCEROL-3-PHOSPHATE DEHYDROGENASE [NAD(+)]-RELATED	coord: 47..152
IPR036291	NAD(P)-binding domain superfamily	SUPERFAMILY	51735	NAD(P)-binding Rossmann-fold domains	coord: 50..159

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
Ecto-sp13_S_contig1805	contig	Ecto-sp13_S_contig1805:19..3013 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.0	2022-07-08

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_Ecto-sp13_S_contig1805.5541.1	mRNA_Ecto-sp13_S_contig1805.5541.1	Ectocarpus species13 EcNAP12_S_4_19m	mRNA	Ecto-sp13_S_contig1805 19..3013 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_Ecto-sp13_S_contig1805.5541.1 ID=prot_Ecto-sp13_S_contig1805.5541.1|Name=mRNA_Ecto-sp13_S_contig1805.5541.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=177bp
MADTGAGIAYAYADESMSMGSMTSCESLLDADLGGAPRQALGVGEGAAPE
RVAIVGSGNWGSAIARIVGRNVTEQEGFEHQIRQWVFPEKVSHNGVEACL
TEVINKEHENVKYLPGVKLPENLVAEGDLALAVKDATILIFVLPHQFLGR
VLPTVAEALGLTKTGSNPGVARDGRR*

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR006168	G3P_DH_NAD-dep
IPR011128	G3P_DH_NAD-dep_N
IPR036291	NAD(P)-bd_dom_sf