mRNA_Ecto-sp13_S_contig1805.5541.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig1805.5541.1 vs. uniprot
Match: D7FUR6_ECTSI (Glycerol-3-phosphate dehydrogenase [NAD(+)] n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FUR6_ECTSI) HSP 1 Score: 310 bits (795), Expect = 1.390e-102 Identity = 163/176 (92.61%), Postives = 165/176 (93.75%), Query Frame = 1
Query: 1 MADTGAGIAYAYADESMSMGSMTSCESLLDADLGGAPRQALGVGEGAAPERVAIVGSGNWGSAIARIVGRNVTEQEGFEHQIRQWVFPEKVSHNGVEACLTEVINKEHENVKYLPGVKLPENLVAEGDLALAVKDATILIFVLPHQFLGRVLPTVAEALGLTKTGSNPGVARDGRR 528
MADTGAGIA A+ADESMSMGSMTSCESLLDADLGGA RQ LG G GAAPERVAIVGSGNWGSAIARIVGRNV EQEGFEHQIRQWVFPEKVSHNGVEACLTEVINKEHENVKYLPGVKLPENLVAEGDLALAVKDATILIFVLPHQFLGRVLPTVAEALGLTK+G GVA GRR
Sbjct: 1 MADTGAGIASAHADESMSMGSMTSCESLLDADLGGASRQPLGGGGGAAPERVAIVGSGNWGSAIARIVGRNVIEQEGFEHQIRQWVFPEKVSHNGVEACLTEVINKEHENVKYLPGVKLPENLVAEGDLALAVKDATILIFVLPHQFLGRVLPTVAEALGLTKSGGTAGVAPGGRR 176
BLAST of mRNA_Ecto-sp13_S_contig1805.5541.1 vs. uniprot
Match: A0A6H5JZY6_9PHAE (Glycerol-3-phosphate dehydrogenase [NAD(+)] n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JZY6_9PHAE) HSP 1 Score: 290 bits (743), Expect = 6.060e-95 Identity = 149/160 (93.12%), Postives = 151/160 (94.38%), Query Frame = 1
Query: 49 MSMGSMTSCESLLDADLGGAPRQALGVGEGAAPERVAIVGSGNWGSAIARIVGRNVTEQEGFEHQIRQWVFPEKVSHNGVEACLTEVINKEHENVKYLPGVKLPENLVAEGDLALAVKDATILIFVLPHQFLGRVLPTVAEALGLTKTGSNPGVARDGRR 528
MSMGSMTSCESLLDADLGGAPRQ LG G GAAPERVAIVGSGNWGSAIARIVGRNV EQEGFEHQIRQWVFPEKVSHNGVEACLTEVIN+EHENVKYLPGVKLPENLVAEGDLALAVKDATILIFVLPHQFLGRVLPTVAEALGLTK+G N G A GRR
Sbjct: 1 MSMGSMTSCESLLDADLGGAPRQVLGGGGGAAPERVAIVGSGNWGSAIARIVGRNVIEQEGFEHQIRQWVFPEKVSHNGVEACLTEVINREHENVKYLPGVKLPENLVAEGDLALAVKDATILIFVLPHQFLGRVLPTVAEALGLTKSGGNAGAAPGGRR 160
BLAST of mRNA_Ecto-sp13_S_contig1805.5541.1 vs. uniprot
Match: A0A8J9SPK1_PHATR (Hypothetical protein (Fragment) n=1 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=A0A8J9SPK1_PHATR) HSP 1 Score: 132 bits (332), Expect = 1.700e-36 Identity = 67/117 (57.26%), Postives = 82/117 (70.09%), Query Frame = 1
Query: 148 ERVAIVGSGNWGSAIARIVGRNVTEQEGFEHQIRQWVFPEKVS-HNGVEACLTEVINKEHENVKYLPGVKLPENLVAEGDLALAVKDATILIFVLPHQFLGRVLPTVAEALGLTKTG 495
++V I+GSGNWGSAIA +VGRN FE Q+ WVF E V +G + LTE+IN HENVKYLPG+ LP N+VA DLA A +DAT+LIFVLPHQFL R+LP + E+ T G
Sbjct: 13 DKVCIIGSGNWGSAIATLVGRNCERLPFFESQVNMWVFEEMVELEDGSQKKLTEIINSRHENVKYLPGIPLPSNIVATPDLAEACRDATLLIFVLPHQFLPRLLPVIRESAHPTCRG 129
BLAST of mRNA_Ecto-sp13_S_contig1805.5541.1 vs. uniprot
Match: A0A7S2HPY0_9EUKA (Glycerol-3-phosphate dehydrogenase [NAD(+)] n=1 Tax=Haptolina brevifila TaxID=156173 RepID=A0A7S2HPY0_9EUKA) HSP 1 Score: 132 bits (332), Expect = 5.410e-34 Identity = 65/111 (58.56%), Postives = 84/111 (75.68%), Query Frame = 1
Query: 136 GAAPERVAIVGSGNWGSAIARIVGRNVTEQEGFEHQIRQWVFPEKVSHNGVEACLTEVINKEHENVKYLPGVKLPENLVAEGDLALAVKDATILIFVLPHQFLGRVLPTVA 468
G E+V IVGSGNWGSAIA+IVGRNV +++ FE +++ WVF E+V LT++IN EHENVKYLP +K EN+VA+ DLA AV +T+LIFVLPHQFLGR+ P ++
Sbjct: 27 GGKKEKVTIVGSGNWGSAIAKIVGRNVLDRDEFEDEVKMWVFQEQVDGKN----LTDIINTEHENVKYLPDIKFTENVVADPDLASAVAGSTLLIFVLPHQFLGRICPQMS 133
BLAST of mRNA_Ecto-sp13_S_contig1805.5541.1 vs. uniprot
Match: A0A7S0EXZ6_9EUKA (Glycerol-3-phosphate dehydrogenase [NAD(+)] n=1 Tax=Phaeocystis antarctica TaxID=33657 RepID=A0A7S0EXZ6_9EUKA) HSP 1 Score: 132 bits (331), Expect = 7.580e-34 Identity = 64/104 (61.54%), Postives = 80/104 (76.92%), Query Frame = 1
Query: 148 ERVAIVGSGNWGSAIARIVGRNVTEQEGFEHQIRQWVFPEKVSHNGVEACLTEVINKEHENVKYLPGVKLPENLVAEGDLALAVKDATILIFVLPHQFLGRVLP 459
E+V I+GSGNWGSAIA+IVGRNV +++ FE ++ WVF E V LT++IN EHENVKYLPGVK +N+VA+ DL AV+ AT+LIFVLPHQFLGR+ P
Sbjct: 31 EKVCIIGSGNWGSAIAKIVGRNVLDRDQFEDEVTMWVFQENVDGKN----LTDIINNEHENVKYLPGVKFTDNVVADPDLTNAVQGATLLIFVLPHQFLGRICP 130
BLAST of mRNA_Ecto-sp13_S_contig1805.5541.1 vs. uniprot
Match: A0A7S0EYM2_9EUKA (Glycerol-3-phosphate dehydrogenase [NAD(+)] n=1 Tax=Phaeocystis antarctica TaxID=33657 RepID=A0A7S0EYM2_9EUKA) HSP 1 Score: 132 bits (331), Expect = 9.590e-34 Identity = 64/104 (61.54%), Postives = 80/104 (76.92%), Query Frame = 1
Query: 148 ERVAIVGSGNWGSAIARIVGRNVTEQEGFEHQIRQWVFPEKVSHNGVEACLTEVINKEHENVKYLPGVKLPENLVAEGDLALAVKDATILIFVLPHQFLGRVLP 459
E+V I+GSGNWGSAIA+IVGRNV +++ FE ++ WVF E V LT++IN EHENVKYLPGVK +N+VA+ DL AV+ AT+LIFVLPHQFLGR+ P
Sbjct: 31 EKVCIIGSGNWGSAIAKIVGRNVLDRDQFEDEVTMWVFQENVDGKN----LTDIINNEHENVKYLPGVKFTDNVVADPDLTNAVQGATLLIFVLPHQFLGRICP 130
BLAST of mRNA_Ecto-sp13_S_contig1805.5541.1 vs. uniprot
Match: B5Y3R9_PHATC (Glycerol-3-phosphate dehydrogenase [NAD(+)] n=1 Tax=Phaeodactylum tricornutum (strain CCAP 1055/1) TaxID=556484 RepID=B5Y3R9_PHATC) HSP 1 Score: 132 bits (331), Expect = 1.070e-33 Identity = 67/117 (57.26%), Postives = 82/117 (70.09%), Query Frame = 1
Query: 148 ERVAIVGSGNWGSAIARIVGRNVTEQEGFEHQIRQWVFPEKVS-HNGVEACLTEVINKEHENVKYLPGVKLPENLVAEGDLALAVKDATILIFVLPHQFLGRVLPTVAEALGLTKTG 495
++V I+GSGNWGSAIA +VGRN FE Q+ WVF E V +G + LTE+IN HENVKYLPG+ LP N+VA DLA A +DAT+LIFVLPHQFL R+LP + E+ T G
Sbjct: 13 DKVCIIGSGNWGSAIATLVGRNCERLPFFESQVNMWVFEEMVELEDGSQKKLTEIINSRHENVKYLPGIPLPSNVVATPDLAEACRDATLLIFVLPHQFLPRLLPVIRESAHPTCRG 129
BLAST of mRNA_Ecto-sp13_S_contig1805.5541.1 vs. uniprot
Match: A0A2D4BLG9_PYTIN (Glycerol-3-phosphate dehydrogenase [NAD(+)] n=2 Tax=Pythium TaxID=4797 RepID=A0A2D4BLG9_PYTIN) HSP 1 Score: 129 bits (325), Expect = 3.590e-33 Identity = 70/113 (61.95%), Postives = 85/113 (75.22%), Query Frame = 1
Query: 148 ERVAIVGSGNWGSAIARIVGRNVTEQ-EGFEHQIRQWVFPEKVSHNGVEACLTEVINKEHENVKYLPGVKLPENLVAEGDLALAVKDATILIFVLPHQFLGRVLPTVAEALGL 483
++V ++GSGNWGSAIARI+G N + F+ I WVF E+V NG + LTE+IN EHENVKYLPG KLPEN++A DL AVKDA ILIF LPHQFLGR+LPT+ +A GL
Sbjct: 3 KKVCLIGSGNWGSAIARIIGENTQRMPDVFQRDIPMWVFEEEV--NGRK--LTEIINTEHENVKYLPGYKLPENIIAVPDLLTAVKDADILIFCLPHQFLGRMLPTI-KAQGL 110
BLAST of mRNA_Ecto-sp13_S_contig1805.5541.1 vs. uniprot
Match: Q567A1_DANRE (Glycerol-3-phosphate dehydrogenase [NAD(+)] n=24 Tax=Cyprinoidei TaxID=30727 RepID=Q567A1_DANRE) HSP 1 Score: 129 bits (325), Expect = 4.270e-33 Identity = 70/119 (58.82%), Postives = 84/119 (70.59%), Query Frame = 1
Query: 145 PERVAIVGSGNWGSAIARIVGRNVTEQEGFEHQIRQWVFPEKVSHNGVEACLTEVINKEHENVKYLPGVKLPENLVAEGDLALAVKDATILIFVLPHQFLGRVLPTV-----AEALGLT 486
P+RV IVGSGNWGSAIA+IVG N F+ + WVF E V NG + LTE+IN EHENVKYLPG KLPEN+VA DL A K A IL+FV+PHQF+GRV T+ A+ALG++
Sbjct: 4 PKRVCIVGSGNWGSAIAKIVGANARNNSKFDSTVNMWVFEEMV--NGRK--LTEIINTEHENVKYLPGHKLPENVVAVADLVEAAKSADILLFVIPHQFIGRVCDTMKGKIKADALGMS 118
BLAST of mRNA_Ecto-sp13_S_contig1805.5541.1 vs. uniprot
Match: A0A0S7KQL8_9TELE (GPDA (Fragment) n=1 Tax=Poeciliopsis prolifica TaxID=188132 RepID=A0A0S7KQL8_9TELE) HSP 1 Score: 125 bits (315), Expect = 8.470e-33 Identity = 67/121 (55.37%), Postives = 88/121 (72.73%), Query Frame = 1
Query: 139 AAPERVAIVGSGNWGSAIARIVGRNVTEQEGFEHQIRQWVFPEKVSHNGVEACLTEVINKEHENVKYLPGVKLPENLVAEGDLALAVKDATILIFVLPHQFLGRVLPTV-----AEALGLT 486
AAP++V IVGSGNWGSAIA+IVG NV + F++ ++ WVF E V NG + LTE+IN HENVKYLPG KLP N++A DL A DA IL+FV+PHQF+G+V T+ ++ALG++
Sbjct: 17 AAPKKVCIVGSGNWGSAIAKIVGANVAQNPKFDNTVKMWVFEETV--NGRK--LTEIINTSHENVKYLPGHKLPTNVLAVPDLVEASSDADILVFVIPHQFIGKVCNTMKGKVKSDALGIS 133 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig1805.5541.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig1805.5541.1 >prot_Ecto-sp13_S_contig1805.5541.1 ID=prot_Ecto-sp13_S_contig1805.5541.1|Name=mRNA_Ecto-sp13_S_contig1805.5541.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=177bp MADTGAGIAYAYADESMSMGSMTSCESLLDADLGGAPRQALGVGEGAAPEback to top mRNA from alignment at Ecto-sp13_S_contig1805:19..3013- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig1805.5541.1 ID=mRNA_Ecto-sp13_S_contig1805.5541.1|Name=mRNA_Ecto-sp13_S_contig1805.5541.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=2995bp|location=Sequence derived from alignment at Ecto-sp13_S_contig1805:19..3013- (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig1805:19..3013- >mRNA_Ecto-sp13_S_contig1805.5541.1 ID=mRNA_Ecto-sp13_S_contig1805.5541.1|Name=mRNA_Ecto-sp13_S_contig1805.5541.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=531bp|location=Sequence derived from alignment at Ecto-sp13_S_contig1805:19..3013- (Ectocarpus species13 EcNAP12_S_4_19m)back to top |