prot_Ecto-sp13_S_contig18042.5538.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig18042.5538.1
Unique Nameprot_Ecto-sp13_S_contig18042.5538.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length80
Homology
BLAST of mRNA_Ecto-sp13_S_contig18042.5538.1 vs. uniprot
Match: D7FRV7_ECTSI (Transcriptional adapter n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FRV7_ECTSI)

HSP 1 Score: 159 bits (401), Expect = 4.610e-44
Identity = 74/76 (97.37%), Postives = 75/76 (98.68%), Query Frame = 0
Query:    4 LCYIRCAECKDVVDLCVSCFFSGSEPRQHKKTHSYRVMDKLHKPIYSEGWTAVEELALADLTRKRGLGAWEAIADL 79
            LCYIRCAECKDVVDLCVSCFFSGSEPRQHKKTHSYRVMDKLHKPIYSEGW+AVEELALADLTRKRGLGAWE IADL
Sbjct:   23 LCYIRCAECKDVVDLCVSCFFSGSEPRQHKKTHSYRVMDKLHKPIYSEGWSAVEELALADLTRKRGLGAWEEIADL 98          
BLAST of mRNA_Ecto-sp13_S_contig18042.5538.1 vs. uniprot
Match: A0A6H5JL08_9PHAE (Transcriptional adapter n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JL08_9PHAE)

HSP 1 Score: 119 bits (297), Expect = 1.780e-29
Identity = 53/75 (70.67%), Postives = 60/75 (80.00%), Query Frame = 0
Query:    4 LCYIRCAECKDVVDLCVSCFFSGSEPRQHKKTHSYRVMDKLHKPIYSEGWTAVEELALADLTRKRGLGAWEAIAD 78
            LCYIRC ECK  VDLC +CFF+G EP  HKKTHSYRVMDKL KPI++E WTA EEL+L D  +K GLGAWE I+D
Sbjct:   60 LCYIRCEECKQEVDLCAACFFAGMEPLGHKKTHSYRVMDKLDKPIFTEDWTAAEELSLMDQVKKMGLGAWEEISD 134          
BLAST of mRNA_Ecto-sp13_S_contig18042.5538.1 vs. uniprot
Match: A0A4D8XTF3_9ALVE (Uncharacterized protein n=1 Tax=Perkinsus sp. BL_2016 TaxID=2494336 RepID=A0A4D8XTF3_9ALVE)

HSP 1 Score: 74.3 bits (181), Expect = 8.780e-14
Identity = 37/71 (52.11%), Postives = 45/71 (63.38%), Query Frame = 0
Query:    7 IRCAECKDVVDLCVSCFFSGSEPRQHKKTHSYRVMDKLHKPIYSEGWTAVEELALADLTRKRGLGAWEAIA 77
            IRCAEC++  DLC+ CF  G+E   HK+THSYRVM+KL   + S  WTA EEL L       GLG W  +A
Sbjct:   58 IRCAECQEF-DLCLDCFSVGAEISSHKRTHSYRVMEKLDFSVLSSDWTAHEELMLLQALDLYGLGNWVEVA 127          
BLAST of mRNA_Ecto-sp13_S_contig18042.5538.1 vs. uniprot
Match: A0A3P3Y5Z7_PLABS (Uncharacterized protein n=2 Tax=Plasmodiophora brassicae TaxID=37360 RepID=A0A3P3Y5Z7_PLABS)

HSP 1 Score: 71.6 bits (174), Expect = 9.120e-13
Identity = 35/82 (42.68%), Postives = 51/82 (62.20%), Query Frame = 0
Query:    2 SQLCYIRCAECKDVVDLCVSCFFSGSE-----PRQHKKTHSYRVMDKLHKPIYSEGWTAVEELALADLTRKRGLGAWEAIAD 78
            SQ   ++C EC D + LCV CF SG+E        H+KTHSYRV+D++   I+ E WTA +EL L +   + G+G W+ +A+
Sbjct:  896 SQSIRVKCCECTDFI-LCVYCFASGAELLVDDQNMHRKTHSYRVIDRVTASIFDEDWTADDELMLLEGIERYGMGNWQDVAN 976          
BLAST of mRNA_Ecto-sp13_S_contig18042.5538.1 vs. uniprot
Match: F4P659_BATDJ (Uncharacterized protein (Fragment) n=1 Tax=Batrachochytrium dendrobatidis (strain JAM81 / FGSC 10211) TaxID=684364 RepID=F4P659_BATDJ)

HSP 1 Score: 71.2 bits (173), Expect = 1.140e-12
Identity = 34/72 (47.22%), Postives = 43/72 (59.72%), Query Frame = 0
Query:    7 IRCAECKDVVDLCVSCFFSGSEPRQHKKTHSYRVMDKLHKPIYSEGWTAVEELALADLTRKRGLGAWEAIAD 78
            I+CA C D  DLCV CF  G+E + HK  H YRV++ L  PI+   W A EEL L +     G+G WE I+D
Sbjct:   18 IKCAICPDF-DLCVECFSCGTELKDHKSDHDYRVLEMLDFPIFESSWGADEELLLVEGLELHGVGNWEQISD 88          
BLAST of mRNA_Ecto-sp13_S_contig18042.5538.1 vs. uniprot
Match: A0A1S8W801_9FUNG (Transcriptional adapter 2 n=1 Tax=Batrachochytrium salamandrivorans TaxID=1357716 RepID=A0A1S8W801_9FUNG)

HSP 1 Score: 69.7 bits (169), Expect = 4.180e-12
Identity = 33/72 (45.83%), Postives = 43/72 (59.72%), Query Frame = 0
Query:    7 IRCAECKDVVDLCVSCFFSGSEPRQHKKTHSYRVMDKLHKPIYSEGWTAVEELALADLTRKRGLGAWEAIAD 78
            I+CA C D  DLCV CF  G+E + HK  H YRV++ L  PI+   W A EEL L +     G+G WE ++D
Sbjct:   45 IKCAICPDF-DLCVECFSCGTELKDHKADHDYRVLEMLDFPIFEADWGADEELLLVEGLELHGVGNWEQVSD 115          
BLAST of mRNA_Ecto-sp13_S_contig18042.5538.1 vs. uniprot
Match: A0A1Y1W9F9_9FUNG (Transcriptional adapter 2 n=1 Tax=Linderina pennispora TaxID=61395 RepID=A0A1Y1W9F9_9FUNG)

HSP 1 Score: 67.4 bits (163), Expect = 2.720e-11
Identity = 36/82 (43.90%), Postives = 50/82 (60.98%), Query Frame = 0
Query:    7 IRCAECK--DVVDLCVSCFFSGSEPRQHKKTHSYRVM------DKLHKPIYSEGWTAVEELALADLTRKRGLGAWEAIADLV 80
            IRC EC+  +  DLC +CF  G E  +HKKTHSYR++      ++   PI++E W+A EEL L D  R+ G+G W   A+ V
Sbjct:   25 IRCHECEKFEEFDLCAACFAKGIEIGRHKKTHSYRIVRAWQLIEQHRFPIFTEDWSADEELLLIDGLRQFGMGNWRDAAEHV 106          
BLAST of mRNA_Ecto-sp13_S_contig18042.5538.1 vs. uniprot
Match: A0A2G5BFS6_COERN (Transcriptional adapter 2 n=1 Tax=Coemansia reversa (strain ATCC 12441 / NRRL 1564) TaxID=763665 RepID=A0A2G5BFS6_COERN)

HSP 1 Score: 67.0 bits (162), Expect = 3.710e-11
Identity = 34/74 (45.95%), Postives = 45/74 (60.81%), Query Frame = 0
Query:    7 IRCAECKDVVDLCVSCFFSGSEPRQHKKTHSYRVMDKLHKPIYSEGWTAVEELALADLTRKRGLGAWEAIADLV 80
            I C EC +  DLC +CF  G E   HK  HSYRV+ +   PI++E W+A EEL L D  R+ G+G W+  A+ V
Sbjct:   37 ISCNECPEF-DLCTTCFSRGIELGSHKNDHSYRVVTRHRFPIFTEDWSADEELLLIDGLRQFGMGNWKDAAEHV 109          
BLAST of mRNA_Ecto-sp13_S_contig18042.5538.1 vs. uniprot
Match: A0A4P9ZPH0_9FUNG (Transcriptional adapter 2 n=1 Tax=Dimargaris cristalligena TaxID=215637 RepID=A0A4P9ZPH0_9FUNG)

HSP 1 Score: 66.2 bits (160), Expect = 6.900e-11
Identity = 34/74 (45.95%), Postives = 45/74 (60.81%), Query Frame = 0
Query:    7 IRCAECKDVVDLCVSCFFSGSEPRQHKKTHSYRVMDKLHKPIYSEGWTAVEELALADLTRKRGLGAWEAIADLV 80
            IRCAEC D  D CV+CF  G E   HK  H Y+V+     PI++E W+A EEL L +  ++ G+G W  IA+ V
Sbjct:   27 IRCAECPDF-DTCVTCFSQGIELGPHKNNHKYQVVTPNFFPIFTEDWSADEELLLIEGIQQFGMGNWMDIAEHV 99          
BLAST of mRNA_Ecto-sp13_S_contig18042.5538.1 vs. uniprot
Match: C3YVY8_BRAFL (Uncharacterized protein n=1 Tax=Branchiostoma floridae TaxID=7739 RepID=C3YVY8_BRAFL)

HSP 1 Score: 64.3 bits (155), Expect = 3.000e-10
Identity = 30/75 (40.00%), Postives = 44/75 (58.67%), Query Frame = 0
Query:    6 YIRCAECKDVVDLCVSCFFSGSEPRQHKKTHSYRVMDKLHKPIYSEGWTAVEELALADLTRKRGLGAWEAIADLV 80
            +I+CA+CK  V LC+ CF  G E   H+  H Y ++     P++  GWTAVEEL L +     G+G W+ I++ V
Sbjct:   24 FIKCAQCKPPVLLCLQCFARGFEKSGHESDHRYEIITN-EFPVFDLGWTAVEELKLLEALGDCGIGNWQEISNNV 97          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig18042.5538.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 22
Match NameE-valueIdentityDescription
D7FRV7_ECTSI4.610e-4497.37Transcriptional adapter n=2 Tax=Ectocarpus TaxID=2... [more]
A0A6H5JL08_9PHAE1.780e-2970.67Transcriptional adapter n=2 Tax=Ectocarpus TaxID=2... [more]
A0A4D8XTF3_9ALVE8.780e-1452.11Uncharacterized protein n=1 Tax=Perkinsus sp. BL_2... [more]
A0A3P3Y5Z7_PLABS9.120e-1342.68Uncharacterized protein n=2 Tax=Plasmodiophora bra... [more]
F4P659_BATDJ1.140e-1247.22Uncharacterized protein (Fragment) n=1 Tax=Batrach... [more]
A0A1S8W801_9FUNG4.180e-1245.83Transcriptional adapter 2 n=1 Tax=Batrachochytrium... [more]
A0A1Y1W9F9_9FUNG2.720e-1143.90Transcriptional adapter 2 n=1 Tax=Linderina pennis... [more]
A0A2G5BFS6_COERN3.710e-1145.95Transcriptional adapter 2 n=1 Tax=Coemansia revers... [more]
A0A4P9ZPH0_9FUNG6.900e-1145.95Transcriptional adapter 2 n=1 Tax=Dimargaris crist... [more]
C3YVY8_BRAFL3.000e-1040.00Uncharacterized protein n=1 Tax=Branchiostoma flor... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.30.60.90coord: 4..42
e-value: 2.5E-6
score: 28.9
NoneNo IPR availablePANTHERPTHR12374TRANSCRIPTIONAL ADAPTOR 2 ADA2 -RELATEDcoord: 5..79
NoneNo IPR availablePANTHERPTHR12374:SF20TRANSCRIPTIONAL ADAPTER 2-BETAcoord: 5..79
NoneNo IPR availableSUPERFAMILY57850RING/U-boxcoord: 6..54

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig18042contigEcto-sp13_S_contig18042:16..1116 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig18042.5538.1mRNA_Ecto-sp13_S_contig18042.5538.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig18042 16..1116 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig18042.5538.1 ID=prot_Ecto-sp13_S_contig18042.5538.1|Name=mRNA_Ecto-sp13_S_contig18042.5538.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=80bp
TSQLCYIRCAECKDVVDLCVSCFFSGSEPRQHKKTHSYRVMDKLHKPIYS
EGWTAVEELALADLTRKRGLGAWEAIADLV
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