prot_Ecto-sp13_S_contig1803.5531.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig1803.5531.1
Unique Nameprot_Ecto-sp13_S_contig1803.5531.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length358
Homology
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BLAST of mRNA_Ecto-sp13_S_contig1803.5531.1 vs. uniprot
Match: A0A6H5KT18_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KT18_9PHAE)

HSP 1 Score: 676 bits (1744), Expect = 5.340e-222
Identity = 339/357 (94.96%), Postives = 343/357 (96.08%), Query Frame = 0 
Query:    1 MMARAVALDNAQGALESFYASFPVVPLLSVAHAKALQTSGEYEEAYDLCLMAQKVVDESVEKGDGMGPAHDPHVLWLQLAFSSFFLQRWSRALDVFTRIVEGVTQACENDKRGLTGFSAAYAAASMCGVQPVKQGEVHKLIDVACVAIKKQEAAGSKEHPGLRSRLQGYAARGPPGAELWLFELLYLHNASAANSMPEAWHESMLELLGQTPVAAVSRAYPQEGATYTPSETDAIMAHKFTEGLVLYKLERMQESLDFFRFIADCSRDKDEPPAPREEGVPPQVVLTESRFVLPHALYLTAHLSYRLRPTEEQLFLSYDFCVRAKRIRDYDFDCQVKIGNLMTSLRHYINAVEAAAK 357
            MMARAVALDNAQGAL+SFYASFPVVPLLSVAHAKALQTSGEYEEAY+LC++AQKVVDESVEKGDGMGPAHDPHVLWLQL FSSFFLQRWS ALD FTRIVEGVTQACENDKRGLTGFSAAYAAASMCGVQPVKQGEVHKLID ACVAIKKQEAAGSKEHPGL SRLQGYAARGPPGAELWLFELLYL NASAANSMPEAWHESMLELLGQTPVA VSRAYPQEG TYTPSETDAIMAHKFTEGLVLYKLERMQESLDFFRFIADCSRDKDEPPAPREEGV    VLTESRFVLPHALYLTAHLSYRLRPTEEQLFLSYD CVRAKRIRDYDFDCQVKIGNLMTSLRHYIN VEAAAK
Sbjct: 2089 MMARAVALDNAQGALDSFYASFPVVPLLSVAHAKALQTSGEYEEAYELCVVAQKVVDESVEKGDGMGPAHDPHVLWLQLGFSSFFLQRWSPALDAFTRIVEGVTQACENDKRGLTGFSAAYAAASMCGVQPVKQGEVHKLIDFACVAIKKQEAAGSKEHPGLMSRLQGYAARGPPGAELWLFELLYLQNASAANSMPEAWHESMLELLGQTPVATVSRAYPQEGVTYTPSETDAIMAHKFTEGLVLYKLERMQESLDFFRFIADCSRDKDEPPAPREEGV----VLTESRFVLPHALYLTAHLSYRLRPTEEQLFLSYDLCVRAKRIRDYDFDCQVKIGNLMTSLRHYINTVEAAAK 2441
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BLAST of mRNA_Ecto-sp13_S_contig1803.5531.1 vs. uniprot
Match: D7FMA1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FMA1_ECTSI)

HSP 1 Score: 603 bits (1556), Expect = 2.060e-197
Identity = 311/357 (87.11%), Postives = 312/357 (87.39%), Query Frame = 0 
Query:    1 MMARAVALDNAQGALESFYASFPVVPLLSVAHAKALQTSGEYEEAYDLCLMAQKVVDESVEKGDGMGPAHDPHVLWLQLAFSSFFLQRWSRALDVFTRIVEGVTQACENDKRGLTGFSAAYAAASMCGVQPVKQGEVHKLIDVACVAIKKQEAAGSKEHPGLRSRLQGYAARGPPGAELWLFELLYLHNASAANSMPEAWHESMLELLGQTPVAAVSRAYPQEGATYTPSETDAIMAHKFTEGLVLYKLERMQESLDFFRFIADCSRDKDEPPAPREEGVPPQVVLTESRFVLPHALYLTAHLSYRLRPTEEQLFLSYDFCVRAKRIRDYDFDCQVKIGNLMTSLRHYINAVEAAAK 357
            MMARAVALDNAQGALESFYASFPVVPLLSVAHAKALQTSGEYEEAYDLCLMAQKVVDESVEKGDGMGPAHDPHVLWLQLAFSSFFLQRWSRALDVFTRIVEGVTQACENDKRGLTGFSAAYAAAS CGVQPVKQGEVHKLIDVACVAIKKQEAAGSKEHPGLRSRLQGYAARGPPGAELWLFELLYLHNASAANSMPEAWHESMLELLG TPVAAVSRAYPQEG TYTPSETDAIMAHKFTE                                         V+LTESRFVLPHALYLTAHLSYRLRPTEEQLFLSYD CVRAKRIRDYDFDCQVKIGNLMTSLRHYINAVEAAAK
Sbjct: 1703 MMARAVALDNAQGALESFYASFPVVPLLSVAHAKALQTSGEYEEAYDLCLMAQKVVDESVEKGDGMGPAHDPHVLWLQLAFSSFFLQRWSRALDVFTRIVEGVTQACENDKRGLTGFSAAYAAASTCGVQPVKQGEVHKLIDVACVAIKKQEAAGSKEHPGLRSRLQGYAARGPPGAELWLFELLYLHNASAANSMPEAWHESMLELLGNTPVAAVSRAYPQEGVTYTPSETDAIMAHKFTE-----------------------------------------VLLTESRFVLPHALYLTAHLSYRLRPTEEQLFLSYDLCVRAKRIRDYDFDCQVKIGNLMTSLRHYINAVEAAAK 2018
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig1803.5531.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5KT18_9PHAE5.340e-22294.96Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FMA1_ECTSI2.060e-19787.11Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR011990Tetratricopeptide-like helical domain superfamilySUPERFAMILY48452TPR-likecoord: 10..352

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig1803contigEcto-sp13_S_contig1803:84..8054 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig1803.5531.1mRNA_Ecto-sp13_S_contig1803.5531.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig1803 76..8156 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig1803.5531.1 ID=prot_Ecto-sp13_S_contig1803.5531.1|Name=mRNA_Ecto-sp13_S_contig1803.5531.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=358bp
MMARAVALDNAQGALESFYASFPVVPLLSVAHAKALQTSGEYEEAYDLCL
MAQKVVDESVEKGDGMGPAHDPHVLWLQLAFSSFFLQRWSRALDVFTRIV
EGVTQACENDKRGLTGFSAAYAAASMCGVQPVKQGEVHKLIDVACVAIKK
QEAAGSKEHPGLRSRLQGYAARGPPGAELWLFELLYLHNASAANSMPEAW
HESMLELLGQTPVAAVSRAYPQEGATYTPSETDAIMAHKFTEGLVLYKLE
RMQESLDFFRFIADCSRDKDEPPAPREEGVPPQVVLTESRFVLPHALYLT
AHLSYRLRPTEEQLFLSYDFCVRAKRIRDYDFDCQVKIGNLMTSLRHYIN
AVEAAAK*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR011990TPR-like_helical_dom_sf