prot_Ecto-sp13_S_contig18026.5529.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig18026.5529.1
Unique Nameprot_Ecto-sp13_S_contig18026.5529.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length271
Homology
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BLAST of mRNA_Ecto-sp13_S_contig18026.5529.1 vs. uniprot
Match: D7G2K2_ECTSI (Trehalose 6-phosphate synthase, family GT20 / Trehalose 6-phosphate phosphatase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G2K2_ECTSI)

HSP 1 Score: 420 bits (1080), Expect = 3.440e-136
Identity = 256/276 (92.75%), Postives = 258/276 (93.48%), Query Frame = 0 
Query:    1 RTRHRRSHSRDSQPSLRRRSLSRTPTQRSICPPEGIFSLDAGGRGDWETLKGAAGVKSPGGWSSGTSETDSTDAEAPPEVETGADIEFVLVVAGGHDLNDECIFEAMTPPEYGLEEFVDGVEALDMPDDVINKVHGDASETPEGDGGGIAGGSNGPKKTASVSIPXXXXXXXXXXXXXXXXXXXX-----GVVARTFSKDRSXXXXXXVAGSGAANAFENYAHVNEAHSTSKKIPVTTIASMSMMGTTMTGNAQTITSLGGVVPAPASPSANAPGE 271
            RTRHRRSHS DSQPSLRRRSLSRTPT R ICPPEGIFSLDAGG G WETLKGAAGVKSPGGWSSGTSETDSTDAEAPPE ETGADIEFVLVVAGGHDLNDECIFEAMTPPEYGLEEFVDGVEALDMPDDVINKVHG+ SETP GDGGGIAGGSNGPKKTASVSIP   XXXXXXXXXXXXXXXXX     GVVA TFSKDRSXXXXX VAGSGAANAFENYAHVNEAHSTSKKIPVTTIASMSM+GTTMTGNAQTITSLGGVVPAPASPSANAPGE
Sbjct:  837 RTRHRRSHSGDSQPSLRRRSLSRTPTLRPICPPEGIFSLDAGGVGAWETLKGAAGVKSPGGWSSGTSETDSTDAEAPPEAETGADIEFVLVVAGGHDLNDECIFEAMTPPEYGLEEFVDGVEALDMPDDVINKVHGETSETPAGDGGGIAGGSNGPKKTASVSIPPSVXXXXXXXXXXXXXXXXXXXXXXGVVAGTFSKDRSXXXXX-VAGSGAANAFENYAHVNEAHSTSKKIPVTTIASMSMIGTTMTGNAQTITSLGGVVPAPASPSANAPGE 1111
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BLAST of mRNA_Ecto-sp13_S_contig18026.5529.1 vs. uniprot
Match: A0A6H5JM06_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JM06_9PHAE)

HSP 1 Score: 334 bits (856), Expect = 6.500e-113
Identity = 197/228 (86.40%), Postives = 197/228 (86.40%), Query Frame = 0 
Query:    1 RTRHRRSHSRDSQPSLRRRSLSRTPTQRSICPPEGIFSLDAGGRGDWETLKGAAGVKSPGGWSSGTSETDSTDAEAPPEVETGADIEFVLVVAGGHDLNDECIFEAMTPPEYGLEEFVDGVEALDMPDDVINKVHGDASETPEGDGGGIAGGSNGPKKTASVSIPXXXXXXXXXXXXXXXXXXXXGVVARTFSKDRSXXXXXXVAGSGAANAFENYAHVNEAHSTSKK 228
            RTRHRRSHSRDSQPSLRRRSLSRTPTQR ICPPEGIFSLDAGG G WETLKGAAGVKSPGGWSSGTSETDSTDAEAPPEVETGADIEFVLVVAGGHDLNDECIFEAMTPPEYGLEEFVDGVEALDMPDDVINKVHGDASETP G GGGIAGGSNGPKKTASVSIPXXXXXXXXXXXXXX                         AGS AANAFENYAHVNEAHSTSKK
Sbjct:   47 RTRHRRSHSRDSQPSLRRRSLSRTPTQRPICPPEGIFSLDAGGLGAWETLKGAAGVKSPGGWSSGTSETDSTDAEAPPEVETGADIEFVLVVAGGHDLNDECIFEAMTPPEYGLEEFVDGVEALDMPDDVINKVHGDASETPAGAGGGIAGGSNGPKKTASVSIPXXXXXXXXXXXXXX-------------------------AGSSAANAFENYAHVNEAHSTSKK 249
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig18026.5529.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7G2K2_ECTSI3.440e-13692.75Trehalose 6-phosphate synthase, family GT20 / Treh... [more]
A0A6H5JM06_9PHAE6.500e-11386.40Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig18026contigEcto-sp13_S_contig18026:24..3029 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig18026.5529.1mRNA_Ecto-sp13_S_contig18026.5529.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig18026 24..3029 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig18026.5529.1 ID=prot_Ecto-sp13_S_contig18026.5529.1|Name=mRNA_Ecto-sp13_S_contig18026.5529.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=271bp
RTRHRRSHSRDSQPSLRRRSLSRTPTQRSICPPEGIFSLDAGGRGDWETL
KGAAGVKSPGGWSSGTSETDSTDAEAPPEVETGADIEFVLVVAGGHDLND
ECIFEAMTPPEYGLEEFVDGVEALDMPDDVINKVHGDASETPEGDGGGIA
GGSNGPKKTASVSIPPSAAGGGGGGPGGGAGSGGSGVVARTFSKDRSGGG
GGGVAGSGAANAFENYAHVNEAHSTSKKIPVTTIASMSMMGTTMTGNAQT
ITSLGGVVPAPASPSANAPGE
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