mRNA_Ecto-sp13_S_contig18013.5525.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp13_S_contig18013.5525.1
Unique NamemRNA_Ecto-sp13_S_contig18013.5525.1
TypemRNA
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Homology
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BLAST of mRNA_Ecto-sp13_S_contig18013.5525.1 vs. uniprot
Match: A0A6H5K1F4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K1F4_9PHAE)

HSP 1 Score: 550 bits (1418), Expect = 3.980e-193
Identity = 286/318 (89.94%), Postives = 301/318 (94.65%), Query Frame = 1 
Query:    1 RAPLEHAAALGNLGLVERLLKAGANGGAGWRGCRGQTMLDAAALGGNPDVVARLLASGCASDVNVVSVSSRRSALHVAAVCGHKAAAKKLIIAGADVNRVDRGDACVSLHVAVEGRHGDLVELLLIGGACPNSRTMLGRTPLHLAAASGNNRVLSTLLGNARTDVDALDSTGVSPLMVASEGGHCSTVEALLQAGADMTLRYAG-AHLRMTAMDTAVTKGHVGVVEAIVENGGNVHATDTYGLTALHHARGGEAVDVLLDAGADVSAKACPALHGFTPILVCAMDNRCEAVVALLKRGGNVSDTSCGGFSALHLTCGS 951
            RAPLEHAAA GNLGLVERLL AGANGGAGWRGCRG+TMLDAAALGGNPDVVA LLASGCASDVNVVS+SSRRSALHVA+VCGH+AAAKKLIIAGADVNRVD GDACVSLHVAVEGRHGDLV+LLLIGGACPNSRTM GRTPLHLAAASGNNRV+STLLGNA TDVDALDS GVSPLMVASEGGHCSTVEALL+AGADM LR+AG AHL MTAMD AV+KGHVGV+EAIVENGGNV ATDTYGLTALHHARG +AVDVLLDAGADV+AKACPALHGFTP+ VC MDN CEAVVALLKRGGNV+DT+CGG SALHLTCGS
Sbjct:   35 RAPLEHAAARGNLGLVERLLNAGANGGAGWRGCRGRTMLDAAALGGNPDVVATLLASGCASDVNVVSLSSRRSALHVASVCGHEAAAKKLIIAGADVNRVDPGDACVSLHVAVEGRHGDLVDLLLIGGACPNSRTMSGRTPLHLAAASGNNRVVSTLLGNAMTDVDALDSRGVSPLMVASEGGHCSTVEALLRAGADMNLRHAGGAHLGMTAMDVAVSKGHVGVIEAIVENGGNVRATDTYGLTALHHARGAQAVDVLLDAGADVNAKACPALHGFTPLSVCVMDNSCEAVVALLKRGGNVNDTNCGGLSALHLTCGS 352
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BLAST of mRNA_Ecto-sp13_S_contig18013.5525.1 vs. uniprot
Match: A0A6H5JY41_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JY41_9PHAE)

HSP 1 Score: 310 bits (793), Expect = 4.530e-99
Identity = 181/321 (56.39%), Postives = 214/321 (66.67%), Query Frame = 1 
Query:    1 RAPLEHAAALGNLGLVERLLKAGANGGAGWRGCRGQTMLDAAALGGNPDVVARLLASGCASDVNVVSVSSRRSALHVAAVCGHKAAAKKLIIAGADVNRVDRGDACVSLHVAVEGRHGDLVELLLIGGACPNSRTMLGRTPLHLAAASGNNRVLSTLLGNARTDVDALDSTGVSPLMVASEGGHCSTVEALLQAGADMTLRY--AGAHLRMTAMDTAVTKGHVGVVEAIVENGGNVHATDTYGLTALH----HARGGEAVDVLLDAGADVSAKACPALHGFTPILVCAMDNRCEAVVALLKRGGNVSDTSCGGFSALHLTC 945
            RAP EHAAA GN+GLVERLL+AGA+GGAGWRGCR +TMLDAAALGGN DVV +LL S C  DVNVVSVSS+RSALH+A    H+AAA+ L+IAGAD +RVD  +     HVA EG H DLV+  L GGACPNSR+ +GRTPLHLA   GNNR +S LLG+A T +DALD+ G SPLM+AS  GH STVE LL+AGAD T R   +G    M A+D A  +GHV VV+AI+ NGG+  A D +G TALH    H  GGE VDV                           D   EA+V L+KRGGNV++ +  G S LH  C
Sbjct:   35 RAPQEHAAARGNIGLVERLLEAGADGGAGWRGCRSRTMLDAAALGGNADVVTKLLRSECVPDVNVVSVSSKRSALHLAVTWSHEAAARTLMIAGADNHRVDPVNRYTPFHVAAEGGHDDLVDNYLTGGACPNSRSRVGRTPLHLADGLGNNRDVSALLGDANTHMDALDNDGFSPLMLASRNGHRSTVEVLLRAGADTTRRATDSGDFSHMAALDVAAAQGHVRVVKAILGNGGDASAVDDHGCTALHYAALHKHGGEVVDVXXXXXXXXXXXXXXXXXXXXXXXXXXXD---EAMVTLVKRGGNVNENTSNGVSVLHWAC 352
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BLAST of mRNA_Ecto-sp13_S_contig18013.5525.1 vs. uniprot
Match: D8LE08_ECTSI (Similar to ankyrin 2,3/unc44, partial n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LE08_ECTSI)

HSP 1 Score: 272 bits (696), Expect = 2.790e-85
Identity = 168/316 (53.16%), Postives = 195/316 (61.71%), Query Frame = 1 
Query:    1 RAPLEHAAALGNLGLVERLLKAGANGGAGWRGCRGQTMLDAAALGGNPDVVARLLASGCASDVNVVSVSSRRSALHVAAVCGHKAAAKKLIIAGADVNRVDRGDACVSLHVAVEGRHGDLVELLLIGGACPNSRTMLGRTPLHLAAASGNNRVLSTLLGNARTDVDALDSTGVSPLMVASEGGHCSTVEALLQAGADMTLR-YAGAHLRMTAMDTAVTKGHVGVVEAIVENGGNVHATDTYGLTALHHARGGEAVDVLLDAGADVSAKACPALHGFTPILVCAMDNRCEAVVALLKRGGNVSDTSCGGFSALHLTC 945
            RAPLEHAAA GN+GLVERLL+AGA+G AGWRGCRG+TMLDAA              SGCA DVNVVSVSS+RSALH+A VCGH+AAA+ L+IAGA++ RVD GD CV  HVA EG HGDLV  LLIGGACPNSRT  GRTPLH+AAA GN+RV+STLLG+  T ++A D+   SPLM+AS  GH STVEALL+AGAD TLR Y+G    M A++ A                                  GGE VDV                 G  P+   A+    E +VALLKR GN  +    G SALH  C
Sbjct:   35 RAPLEHAAARGNIGLVERLLEAGADGRAGWRGCRGRTMLDAAXXXXXXXXXXXXXXSGCAPDVNVVSVSSKRSALHLAVVCGHEAAARTLMIAGANIRRVDPGDQCVPFHVAAEGGHGDLVGNLLIGGACPNSRTRFGRTPLHVAAAVGNSRVVSTLLGDTSTSINARDNDLHSPLMLASANGHRSTVEALLRAGADTTLRCYSGGVSDMAALEMA----------------------------------GGEVVDVXXXXXXXXXXXXA---GGSIPLHASAVHGHDETMVALLKREGNFDEQDNAGRSALHWAC 313
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BLAST of mRNA_Ecto-sp13_S_contig18013.5525.1 vs. uniprot
Match: A0A6H5K9V0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K9V0_9PHAE)

HSP 1 Score: 261 bits (666), Expect = 8.610e-83
Identity = 148/245 (60.41%), Postives = 174/245 (71.02%), Query Frame = 1 
Query:   13 EHAAALGNLGLVERLLKAGANGGAGWRGCRGQTMLDAAALGGNPDVVARLLASGCASDVNVVSVSSRRSALHVAAVCGHKAAAKKLIIAGADVNRVDRGDACVSLHVAVEGRHGDLVELLLIGGACPNSRTMLGRTPLHLAAASGNNRVLSTLLGNARTDVDALDSTGVSPLMVASEGGHCSTVEALLQAGADMTLRYAGAH-LRMTAMDTAVTKGHVGVVEAIVENGGNVHATDTYGLTALHHA 744
            EHAAA GN+GLVERLL+AGA+G AG RGCRG+TMLDAAALGGN DV                     RSALH+  VCGH+AAA+ L+IAGA+++R+D+G+ CV  HVA EG HGDLV   LI GACPNSRT  G TPLHL+A  GNNRV+S LLGN  TD+DAL   G SPLM+AS  GH STVEALL+AGAD T R +  H  R+ A+D A  KGHV VV A++ NGG+  A D +G TALHHA
Sbjct:   14 EHAAARGNIGLVERLLEAGAHGRAGRRGCRGRTMLDAAALGGNADV---------------------RSALHLTVVCGHEAAARSLMIAGANMHRLDQGNQCVPFHVAAEGGHGDLVGNFLIRGACPNSRTRFGLTPLHLSAGRGNNRVVSALLGNTSTDIDALAKDGFSPLMLASTNGHRSTVEALLRAGADTTPRASHIHDHRVAALDLAAGKGHVEVVIALLGNGGDASAVDPHGRTALHHA 237
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BLAST of mRNA_Ecto-sp13_S_contig18013.5525.1 vs. uniprot
Match: D8LBP9_ECTSI (Similar to ankyrin 2,3/unc44 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LBP9_ECTSI)

HSP 1 Score: 225 bits (573), Expect = 3.660e-66
Identity = 153/319 (47.96%), Postives = 185/319 (57.99%), Query Frame = 1 
Query:    1 RAPLEHAAALGNLGLVERLLKAGANGGAGWRGCRGQTMLDAAALGGNPDVVARLLASGCASDVNVVSVSSRRSALHVAAVCGHKAAAKKLIIAGADVNRVDRGDACVSLHVAVEGRHGDLVELLLIGGACPNSRTMLGRTPLHLAAASGNNRVLSTLLGNARTDVDALDSTGVSPLMVASEGGHCSTVEALLQAGADMTLRYAGAHLRMTAMDTAVTKGHVGVVEAIVENGGNVHATDTYGLTALHHA---RGGEAVDVLLDAGADVSAKACPALHGFTPILVCA-MDNRCEAVVALLKRGGNVSDTSCGGFSALHLTC 945
            RAPLEHAAA G   LVE+LL AGA+GGAGW GCRG+T+LDAAALGGNPDVV  LL +GC  DVNVVSVSSRRSALH++AVCGH+AAA+KLI+AGAD NRVD                             PN+R +LGRTPLH AA  G + V++ L     TD D LD +G+SPL VAS+ GH STV+ LL AGAD+++R      R +                       V+A+  +G TALH         A+DVLLDAGAD+  K   A    TP+ V        +AV  LL+RG  VS       + LHL C
Sbjct:   33 RAPLEHAAARGEFVLVEKLLNAGADGGAGWSGCRGRTLLDAAALGGNPDVVTTLLRAGCLPDVNVVSVSSRRSALHLSAVCGHEAAARKLILAGADANRVDPAXXXXXXXXXXXXXXXXXXXXXXXXXXXPNARDLLGRTPLHRAAYMGQDMVVAVLTDMPSTDKDILDKSGLSPLTVASQRGHLSTVKTLLNAGADVSMRTGH---RNSXXXXXXXXXXXXXXXXXXXXXXXVNASK-HGYTALHAGCAMNQAGAMDVLLDAGADMDRKCYGAS---TPLCVAIEFGASVQAVHTLLRRGCQVSGPM--DKTMLHLAC 342
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BLAST of mRNA_Ecto-sp13_S_contig18013.5525.1 vs. uniprot
Match: A0A6H5JE18_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JE18_9PHAE)

HSP 1 Score: 218 bits (554), Expect = 2.070e-64
Identity = 119/197 (60.41%), Postives = 145/197 (73.60%), Query Frame = 1 
Query:   13 EHAAALGNLGLVERLLKAGANGGAGWRGCRGQTMLDAAALGGNPDVVARLLASGCASDVNVVSVSSRRSALHVAAVCGHKAAAKKLIIAGADVNRVDRGDACVSLHVAVEGRHGDLVELLLIGGACPNSRTMLGRTPLHLAAASGNNRVLSTLLGNARTDVDALDSTGVSPLMVASEGGHCSTVEALLQAGADMTLR 603
            EHA A G +GLV++LL AGA GGAGW GC G+T+LDAAALGGNPDVV  LL +GC  DVN VSVSSRRSA H++AVCGH+AAA+KLI+AGAD +RVD  + C  LHVA  G H  LV  LLIGGA PN+R +LGRTPL+ AA    + V++ L     TD D LD   ++PLMVA + GH ST + LL AGAD+++R
Sbjct:   24 EHAEARGEVGLVKKLLNAGAGGGAGWSGCHGRTLLDAAALGGNPDVVTALLRAGCLPDVNAVSVSSRRSAWHLSAVCGHEAAARKLILAGADADRVDPAEKCGPLHVAAAGGHCSLVGDLLIGGAHPNARDLLGRTPLYRAAYMRQDMVVAVLTDMPSTDKDILDYRELTPLMVALQRGHLSTNKTLLNAGADVSIR 220
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BLAST of mRNA_Ecto-sp13_S_contig18013.5525.1 vs. uniprot
Match: D7FXA8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FXA8_ECTSI)

HSP 1 Score: 210 bits (535), Expect = 1.050e-60
Identity = 147/319 (46.08%), Postives = 191/319 (59.87%), Query Frame = 1 
Query:    1 RAPLEHAAALGNLGLVERLLKAGANGGAGWRGCRGQTMLDAAALGGNPDVVARLLASGCASDVNVVSVSSRRSALHVAAVCGHKAAAKKLIIAGADVNRVDRGDACVSLHVAVEGRHGDLVELLLIGGACPNS--RTMLGR-TPLHLAAASGNNRVLSTLLGNARTDVDALDSTGVSPLMVASEGGHCSTVEALLQAGADMTLRYAGAHLRMTAMDTAVTKGHVGVVEAIVENGGNVHATDTYGLTALHHA---RGGEAVDVLLDAGADVSAKACPALHGFTPILVCAMDNRCEAVVALLKRGGNVSDTSCGGFSALHL 939
            RAPLEHAAA GNL LV+RLLKAG +G AGWRGCRG+++LDAAALGGN  V++ LL +GC  DVNVV+ S+ RSAL+ + +  H+AAA+KLI+AGADVN VDR D    L  AV+    DLV  LL+ GA PN   R   G  TPLH AA  G     S LL +  TD                + GH +TV+ LL AGAD  +R   +H   +A+  A     + V++A++E+G +V+  + +    LH A        + VLLDAGAD+  K C  L G T +   A     EA++ALL+RG NV  T+  G +ALHL
Sbjct:   33 RAPLEHAAASGNLNLVDRLLKAGVDGKAGWRGCRGRSLLDAAALGGNAGVMSALLQAGCGPDVNVVASSTGRSALYQSVLGKHEAAARKLILAGADVNFVDRADKAGPLFAAVKAGCDDLVGNLLMAGANPNVIVRHSFGHGTPLHAAAKQGLANTASVLLSSPSTD----------------KNGHVATVKVLLAAGADTDIRDLDSH---SALVFAAQYERIDVMKALLEHGVDVNVGEDH-WNPLHWAAQFNSTGCITVLLDAGADIDVK-CSFLDGRTSLHFAAETGNNEALLALLRRGANVHQTTDDGSTALHL 330
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BLAST of mRNA_Ecto-sp13_S_contig18013.5525.1 vs. uniprot
Match: A0A6H5KNQ1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KNQ1_9PHAE)

HSP 1 Score: 199 bits (506), Expect = 1.990e-58
Identity = 136/305 (44.59%), Postives = 177/305 (58.03%), Query Frame = 1 
Query:    1 RAPLEHAAALGNLGLVERLLKAGANGGAGWRGCRGQTMLDAAALGGNPDVVARLLASGCASDVNVVSVSSRRSALHVAAVCGHKAAAKKLIIAGADVNRVDRGDACVSLHVAVEGRHGDLVELLLIGGACPNSRTMLGRTPLHLAAASGNNRVLSTLLGNARTDVDALDSTGVSPLMVASEGGHCSTVEALLQAGADMTLRYAGAHLRMTAMDTAVTKGHVGVVEAIVENGGNVHATDTYGLTALHHA-----RGGEAVDVLLDAGADVSAKACPALHGFTPILVCAMDNRCEAVVALLKRGGNV 900
            R PLEHAA+ GN  LVERLL+AGA+ GAGWRGCRG+T+LDAAALGGN DV++ L+  G  +DVN V+VSSRRSALH A  CGH+AAAK+L++ GADVN  D    C  L  A++G H  LV  L IGGA PN R   G                   LG          +T V+  M+A   GH + VE LL+AGAD +LR    +   + +D A     + ++EAI+  G +V A D  G TALH A     R G AV +L++AGA+   K      G+TP+   A+ +R   + ALL+   +V
Sbjct:   35 RVPLEHAASRGNPNLVERLLQAGADAGAGWRGCRGRTLLDAAALGGNADVMSALIRGGAGADVNKVTVSSRRSALHTATCCGHEAAAKRLVLTGADVNFRDPVAKCSVLSQAIQGSHTQLVNDLPIGGARPNIRDDCG-------------------LGK---------TTYVTTFMLAVRRGHLAIVETLLEAGADCSLRQWADY---SPLDVAAEHRALPILEAILGRGVDVDAQDRAGCTALHTAVLFSDRAGPAVHMLIEAGANTELKNG---GGWTPLHAAAVHHRVNCMAALLQNNASV 305
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BLAST of mRNA_Ecto-sp13_S_contig18013.5525.1 vs. uniprot
Match: D7FLL7_ECTSI (Ankyrin repeat protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FLL7_ECTSI)

HSP 1 Score: 177 bits (448), Expect = 5.090e-48
Identity = 132/322 (40.99%), Postives = 169/322 (52.48%), Query Frame = 1 
Query:    1 RAPLEHAAALGNLGLVERLLKAGANGGAGWRGCRGQTMLDAAALGGNPDVVARLLASGCASDVNVVSVSSRRSALHVAAVCGHKAAAKKLIIAGADVNRVDRGDACVSLHVAVEGRHGDLVELLLIGGACPNSRTMLGRTPLHLAAASGNNRVLSTLL-GNARTDVDALDSTGVSPLMVASEGGHCSTVEALLQAGADMTLRYAGAHLRMTAMDTAVTKGHVGVVEAIVENGGNVHATDTYGLTALHHA-----RGGEAVDVLLDAGADVSAKACPALHGFTPILVCAMDNRCEAVVALLKRGGNVSDT-SCGGFSALHLTC 945
            R  LEHAA+ GNL LVERLL+AGA+ G+GWRGCR +T+LDAA                  +DVN V+VSSRRSAL+ A  CGH+AAAK+LI+AG+DVN  D    C  L  A++G H   V+ LLIGGA PN R   G  PL  AA      V+S LL   A  +V    +   +PLM+A   GH + VE LL+AGAD +LR    +   +                       V A D  G TALH A     R G AV +L+ A AD   K+   + G+TP+   A  +R   V ALL+   +V +     G + LH  C
Sbjct:   35 RVALEHAASRGNLSLVERLLRAGADAGSGWRGCRCRTLLDAAXXXXXXXXXXXXXXXXAGADVNKVTVSSRRSALYTATCCGHEAAAKRLILAGSDVNFRDPVAKCSVLSQAIQGSHTQFVDDLLIGGARPNIRDDCGMAPLQAAALFAEEGVVSALLLAKADVNVGLGKTMYETPLMLAVRRGHLAIVETLLEAGADCSLRQLEDY---SXXXXXXXXXXXXXXXXXXXXXXXVDAQDRAGCTALHTAILFSDRAGPAVHMLVKARADTELKS---VGGWTPLHAAAEHHRVNCVAALLQNNASVRNRFDATGDTPLHRAC 350
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BLAST of mRNA_Ecto-sp13_S_contig18013.5525.1 vs. uniprot
Match: A0A6H5K513_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K513_9PHAE)

HSP 1 Score: 157 bits (396), Expect = 2.000e-40
Identity = 121/317 (38.17%), Postives = 159/317 (50.16%), Query Frame = 1 
Query:    1 RAPLEHAAALGNLGLVERLLKAGANGGAGWRGCRGQTMLDAAALGGNPDVVARLLASGCASDVNVVSVSSRRSALHVAAVCGHKAAAKKLIIAGADVNRVDRGDACVSLHVAVEGRHGDLVELLLIGGACPNSRTMLGRTPLHLAAASGNN-RVLSTLLGNARTDVDALDSTGVSPLMVASEGGHCSTVEALLQAGADMTLRYAGAHLRMTAMDTAVTKGHVGVVEAIVENGGNVHATDTYGLTALHHARGG---EAVDVLLDAGADVSAKACPALHGFTPILVCAMDNRCEAVVALLKRGGNVSDTSCGGFSALHL 939
            R PLEHAAA GNL LV +LLKAGA+G AGWRGC  +T+LDAA  GGN  V++ LL +GC  D NV++ S+ RS L+ + +   KA A++LI+AGADVN  DR +    L  AV     DL                          A  N  +++S LL +  TD DAL   G +PLMVA+E GH +TV+ LL AGAD+ +R                               N    D    + LH A G    + V VLLDAGA+++ + C  L               EA++ALL RG  V + +  G +ALHL
Sbjct:   35 RVPLEHAAASGNLDLVNKLLKAGADGEAGWRGCGDRTLLDAALSGGNAGVMSALLQAGCGPDANVLAPSTGRSVLYQSILSNQKAVARELILAGADVNIKDRAEKAGPLLAAVRAGCDDLXXXXXXXXXXXXXXXXXXXXXXXXXXAGMNKAKIVSVLLSSPMTDKDALVD-GYTPLMVAAEQGHVATVKVLLAAGADVDVREVDYSCSAXXXXXXXXXXXXXXXXXXXXXXANEGVIDDQ--SPLHWAAGHNRPDCVAVLLDAGANINGR-CNFLDNHXXXXXXXXXXXXEALLALLSRGARVDEKTDDGSTALHL 347
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig18013.5525.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5K1F4_9PHAE3.980e-19389.94Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JY41_9PHAE4.530e-9956.39Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LE08_ECTSI2.790e-8553.16Similar to ankyrin 2,3/unc44, partial n=1 Tax=Ecto... [more]
A0A6H5K9V0_9PHAE8.610e-8360.41Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LBP9_ECTSI3.660e-6647.96Similar to ankyrin 2,3/unc44 n=1 Tax=Ectocarpus si... [more]
A0A6H5JE18_9PHAE2.070e-6460.41Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FXA8_ECTSI1.050e-6046.08Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KNQ1_9PHAE1.990e-5844.59Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FLL7_ECTSI5.090e-4840.99Ankyrin repeat protein n=1 Tax=Ectocarpus siliculo... [more]
A0A6H5K513_9PHAE2.000e-4038.17Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig18013contigEcto-sp13_S_contig18013:805..1755 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop0
Start0
Seed ortholog score278.5
Seed ortholog evalue3.9e-72
Seed eggNOG ortholog2880.D8LE08
Model size951
KEGG koko:K21440
Hectar predicted targeting categoryother localisation
GOsGO:0001508,GO:0002027,GO:0002262,GO:0002376,GO:0002520,GO:0003008,GO:0003012,GO:0003013,GO:0003015,GO:0003205,GO:0003230,GO:0003279,GO:0003283,GO:0003674,GO:0005198,GO:0005200,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005737,GO:0005783,GO:0005829,GO:0005856,GO:0005886,GO:0005911,GO:0005938,GO:0006725,GO:0006778,GO:0006779,GO:0006807,GO:0006810,GO:0006811,GO:0006812,GO:0006816,GO:0006873,GO:0006874,GO:0006875,GO:0006887,GO:0006888,GO:0006928,GO:0006936,GO:0006937,GO:0006941,GO:0006942,GO:0006996,GO:0007009,GO:0007010,GO:0007154,GO:0007163,GO:0007165,GO:0007267,GO:0007275,GO:0007507,GO:0008015,GO:0008016,GO:0008092,GO:0008093,GO:0008104,GO:0008150,GO:0008152,GO:0009058,GO:0009893,GO:0009987,GO:0010256,GO:0010468,GO:0010522,GO:0010604,GO:0010628,GO:0010638,GO:0010646,GO:0010880,GO:0010881,GO:0010882,GO:0010959,GO:0012505,GO:0014704,GO:0014731,GO:0015672,GO:0016020,GO:0016043,GO:0016192,GO:0016323,GO:0016528,GO:0016529,GO:0018130,GO:0019222,GO:0019438,GO:0019722,GO:0019725,GO:0019899,GO:0019900,GO:0019901,GO:0019932,GO:0022898,GO:0023051,GO:0023052,GO:0030001,GO:0030003,GO:0030011,GO:0030016,GO:0030017,GO:0030018,GO:0030029,GO:0030048,GO:0030054,GO:0030097,GO:0030099,GO:0030154,GO:0030218,GO:0030315,GO:0030424,GO:0030507,GO:0030673,GO:0030674,GO:0030863,GO:0031252,GO:0031253,GO:0031256,GO:0031430,GO:0031647,GO:0031672,GO:0031674,GO:0032409,GO:0032411,GO:0032412,GO:0032414,GO:0032501,GO:0032502,GO:0032589,GO:0032879,GO:0032940,GO:0032970,GO:0033013,GO:0033014,GO:0033036,GO:0033043,GO:0033267,GO:0033292,GO:0033365,GO:0034101,GO:0034394,GO:0034613,GO:0034641,GO:0034762,GO:0034764,GO:0034765,GO:0034767,GO:0035088,GO:0035090,GO:0035556,GO:0035637,GO:0036309,GO:0036371,GO:0042383,GO:0042391,GO:0042592,GO:0042692,GO:0042995,GO:0043005,GO:0043034,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043266,GO:0043268,GO:0043269,GO:0043270,GO:0043292,GO:0044057,GO:0044093,GO:0044237,GO:0044249,GO:0044271,GO:0044291,GO:0044304,GO:0044325,GO:0044422,GO:0044424,GO:0044425,GO:0044444,GO:0044448,GO:0044449,GO:0044456,GO:0044459,GO:0044463,GO:0044464,GO:0045197,GO:0045199,GO:0045202,GO:0045211,GO:0046483,GO:0046903,GO:0046907,GO:0048193,GO:0048468,GO:0048513,GO:0048518,GO:0048522,GO:0048534,GO:0048731,GO:0048821,GO:0048856,GO:0048869,GO:0048872,GO:0048878,GO:0050789,GO:0050794,GO:0050801,GO:0050821,GO:0050896,GO:0051049,GO:0051050,GO:0051117,GO:0051128,GO:0051130,GO:0051179,GO:0051186,GO:0051188,GO:0051234,GO:0051239,GO:0051270,GO:0051279,GO:0051282,GO:0051641,GO:0051649,GO:0051716,GO:0051899,GO:0051924,GO:0051928,GO:0055001,GO:0055065,GO:0055072,GO:0055074,GO:0055076,GO:0055080,GO:0055082,GO:0055117,GO:0060047,GO:0060048,GO:0060090,GO:0060255,GO:0060306,GO:0060307,GO:0060341,GO:0061024,GO:0061061,GO:0061245,GO:0061337,GO:0061515,GO:0065007,GO:0065008,GO:0065009,GO:0070252,GO:0070296,GO:0070727,GO:0070838,GO:0070972,GO:0071704,GO:0071840,GO:0071944,GO:0072359,GO:0072503,GO:0072507,GO:0072511,GO:0072657,GO:0072659,GO:0086001,GO:0086002,GO:0086003,GO:0086004,GO:0086005,GO:0086010,GO:0086012,GO:0086014,GO:0086015,GO:0086018,GO:0086019,GO:0086026,GO:0086046,GO:0086065,GO:0086066,GO:0086070,GO:0086091,GO:0090257,GO:0097060,GO:0097458,GO:0098590,GO:0098771,GO:0098794,GO:0098900,GO:0098901,GO:0098907,GO:0098910,GO:0099080,GO:0099081,GO:0099512,GO:0099568,GO:0099623,GO:0120025,GO:0120038,GO:1901016,GO:1901018,GO:1901019,GO:1901021,GO:1901360,GO:1901362,GO:1901379,GO:1901381,GO:1901564,GO:1901566,GO:1901576,GO:1903115,GO:1903169,GO:1903522,GO:1903779,GO:1904062,GO:1904064,GO:1904427,GO:1990778,GO:2001257,GO:2001259
Exons1
EggNOG free text desc.response to abiotic stimulus
EggNOG OGsCOG0666@1,KOG4177@2759
Cds size951
COG Functional cat.G
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko04131
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681462931.4408987-CDS-Ecto-sp13_S_contig18013:804..17551681462931.4408987-CDS-Ecto-sp13_S_contig18013:804..1755Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig18013 805..1755 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig18013.5525.1prot_Ecto-sp13_S_contig18013.5525.1Ectocarpus species13 EcNAP12_S_4_19mpolypeptideEcto-sp13_S_contig18013 805..1755 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp13_S_contig18013.5525.1

>prot_Ecto-sp13_S_contig18013.5525.1 ID=prot_Ecto-sp13_S_contig18013.5525.1|Name=mRNA_Ecto-sp13_S_contig18013.5525.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=317bp
RAPLEHAAALGNLGLVERLLKAGANGGAGWRGCRGQTMLDAAALGGNPDV
VARLLASGCASDVNVVSVSSRRSALHVAAVCGHKAAAKKLIIAGADVNRV
DRGDACVSLHVAVEGRHGDLVELLLIGGACPNSRTMLGRTPLHLAAASGN
NRVLSTLLGNARTDVDALDSTGVSPLMVASEGGHCSTVEALLQAGADMTL
RYAGAHLRMTAMDTAVTKGHVGVVEAIVENGGNVHATDTYGLTALHHARG
GEAVDVLLDAGADVSAKACPALHGFTPILVCAMDNRCEAVVALLKRGGNV
SDTSCGGFSALHLTCGS
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mRNA from alignment at Ecto-sp13_S_contig18013:805..1755-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp13_S_contig18013.5525.1 ID=mRNA_Ecto-sp13_S_contig18013.5525.1|Name=mRNA_Ecto-sp13_S_contig18013.5525.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=951bp|location=Sequence derived from alignment at Ecto-sp13_S_contig18013:805..1755- (Ectocarpus species13 EcNAP12_S_4_19m)
CGGGCTCCGCTCGAGCACGCCGCGGCCCTCGGCAATCTTGGCCTCGTCGA
GAGACTGCTCAAGGCCGGGGCCAACGGCGGGGCGGGGTGGAGAGGGTGCC
GCGGGCAGACAATGCTCGACGCCGCCGCACTGGGTGGAAACCCGGACGTG
GTGGCGAGGTTGCTCGCATCGGGCTGTGCTTCGGATGTGAACGTGGTGTC
GGTGTCGTCGAGGAGGTCCGCCCTGCACGTGGCCGCTGTGTGCGGCCACA
AAGCGGCGGCGAAGAAGCTGATCATTGCCGGAGCCGACGTTAACCGGGTC
GACCGAGGGGATGCATGTGTCTCGTTGCATGTCGCCGTTGAAGGGAGACA
CGGTGACTTGGTAGAGTTGCTGCTGATCGGCGGGGCTTGTCCCAATTCTC
GCACCATGTTGGGCCGTACCCCGCTACACCTTGCTGCTGCAAGCGGCAAC
AATCGTGTTTTGTCAACCCTGCTTGGCAACGCCAGGACCGATGTCGACGC
GCTCGACAGCACGGGGGTTTCCCCACTTATGGTGGCGTCTGAAGGAGGCC
ACTGTTCTACGGTCGAGGCTCTCCTTCAGGCTGGTGCCGACATGACCCTA
CGCTATGCTGGAGCCCATCTTCGCATGACGGCAATGGATACAGCGGTAAC
AAAAGGACACGTTGGGGTGGTCGAAGCTATTGTTGAGAACGGTGGAAATG
TGCATGCTACCGACACCTACGGCTTGACTGCTTTACACCACGCCCGTGGG
GGAGAGGCGGTGGACGTGCTTCTCGATGCCGGGGCAGATGTCAGCGCCAA
AGCATGTCCGGCATTGCATGGGTTTACACCCATCCTCGTGTGCGCCATGG
ACAACAGGTGCGAAGCCGTGGTTGCCCTTTTGAAGCGGGGGGGCAACGTC
AGTGACACGAGCTGCGGTGGGTTCTCCGCGTTGCATTTGACATGTGGAAG
T
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Coding sequence (CDS) from alignment at Ecto-sp13_S_contig18013:805..1755-

>mRNA_Ecto-sp13_S_contig18013.5525.1 ID=mRNA_Ecto-sp13_S_contig18013.5525.1|Name=mRNA_Ecto-sp13_S_contig18013.5525.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=951bp|location=Sequence derived from alignment at Ecto-sp13_S_contig18013:805..1755- (Ectocarpus species13 EcNAP12_S_4_19m)
CGGGCTCCGCTCGAGCACGCCGCGGCCCTCGGCAATCTTGGCCTCGTCGA
GAGACTGCTCAAGGCCGGGGCCAACGGCGGGGCGGGGTGGAGAGGGTGCC
GCGGGCAGACAATGCTCGACGCCGCCGCACTGGGTGGAAACCCGGACGTG
GTGGCGAGGTTGCTCGCATCGGGCTGTGCTTCGGATGTGAACGTGGTGTC
GGTGTCGTCGAGGAGGTCCGCCCTGCACGTGGCCGCTGTGTGCGGCCACA
AAGCGGCGGCGAAGAAGCTGATCATTGCCGGAGCCGACGTTAACCGGGTC
GACCGAGGGGATGCATGTGTCTCGTTGCATGTCGCCGTTGAAGGGAGACA
CGGTGACTTGGTAGAGTTGCTGCTGATCGGCGGGGCTTGTCCCAATTCTC
GCACCATGTTGGGCCGTACCCCGCTACACCTTGCTGCTGCAAGCGGCAAC
AATCGTGTTTTGTCAACCCTGCTTGGCAACGCCAGGACCGATGTCGACGC
GCTCGACAGCACGGGGGTTTCCCCACTTATGGTGGCGTCTGAAGGAGGCC
ACTGTTCTACGGTCGAGGCTCTCCTTCAGGCTGGTGCCGACATGACCCTA
CGCTATGCTGGAGCCCATCTTCGCATGACGGCAATGGATACAGCGGTAAC
AAAAGGACACGTTGGGGTGGTCGAAGCTATTGTTGAGAACGGTGGAAATG
TGCATGCTACCGACACCTACGGCTTGACTGCTTTACACCACGCCCGTGGG
GGAGAGGCGGTGGACGTGCTTCTCGATGCCGGGGCAGATGTCAGCGCCAA
AGCATGTCCGGCATTGCATGGGTTTACACCCATCCTCGTGTGCGCCATGG
ACAACAGGTGCGAAGCCGTGGTTGCCCTTTTGAAGCGGGGGGGCAACGTC
AGTGACACGAGCTGCGGTGGGTTCTCCGCGTTGCATTTGACATGTGGAAG
T
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