prot_Ecto-sp13_S_contig1801.5522.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig1801.5522.1
Unique Nameprot_Ecto-sp13_S_contig1801.5522.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length254
Homology
BLAST of mRNA_Ecto-sp13_S_contig1801.5522.1 vs. uniprot
Match: D8LRR6_ECTSI (DUF4149 domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LRR6_ECTSI)

HSP 1 Score: 458 bits (1178), Expect = 3.500e-162
Identity = 235/253 (92.89%), Postives = 243/253 (96.05%), Query Frame = 0
Query:    1 MRLLLLMSAGSFLGGLTYAFCPMRVPHRAAVAPGGVRRMVTAMEVKPEAGPSGVQSLSKWDPSAQQAFIQPATHNKNPLRVAAILTAAGLASKGAMLVPGNLAKMVHVVALNAWMGSTLWTTFFAGITMFRNLPRQTFGKLQSKLFPMYFQLNFASILAIYIIRGCPLRTRAGVTLLVSLLTTLLNLVLLEPKSTSIMLQRYKLEDDKKKDSDEYKELGKTFGKFHGMSSFANLGALIGSFVYTWELASVIPV 253
            MRLLLLMSA SFLGG TYAFCPMRVPHRAAVAPGG+RRM+TAME K EAGPSGVQSLSKWDPSAQQAFIQPA HNKNP+RVAAILTAAGLASKGAMLVPGNLAKMVH+VALNAWMGSTLWTTFFAGITM RNLPRQTFGKLQSKLFP+YFQ NF SILAIYIIRGCPLRTRAGVTLLVSL +TLLNLVLLEPKSTSIML+RYKLEDDKKKDSDEYKELGKTFGKFHGMSSFANLGALIGSFVY WELASVIP+
Sbjct:    1 MRLLLLMSAASFLGGSTYAFCPMRVPHRAAVAPGGIRRMMTAMETKSEAGPSGVQSLSKWDPSAQQAFIQPAIHNKNPVRVAAILTAAGLASKGAMLVPGNLAKMVHMVALNAWMGSTLWTTFFAGITMMRNLPRQTFGKLQSKLFPLYFQFNFVSILAIYIIRGCPLRTRAGVTLLVSLFSTLLNLVLLEPKSTSIMLERYKLEDDKKKDSDEYKELGKTFGKFHGMSSFANLGALIGSFVYAWELASVIPI 253          
BLAST of mRNA_Ecto-sp13_S_contig1801.5522.1 vs. uniprot
Match: A0A6H5KHA9_9PHAE (DUF4149 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KHA9_9PHAE)

HSP 1 Score: 248 bits (634), Expect = 4.170e-81
Identity = 124/128 (96.88%), Postives = 127/128 (99.22%), Query Frame = 0
Query:   43 MEVKPEAGPSGVQSLSKWDPSAQQAFIQPATHNKNPLRVAAILTAAGLASKGAMLVPGNLAKMVHVVALNAWMGSTLWTTFFAGITMFRNLPRQTFGKLQSKLFPMYFQLNFASILAIYIIRGCPLRT 170
            MEVKPEAGPSGVQSLSKWDPSAQQAFIQPA HNKNP+RVAAILTAAGLASKGAMLVPGNLAKMVHVVALNAWMGSTLWTTFFAGITMFRNLPRQTFGKLQSKLFP+YFQLNFASILAIYIIRGCPLR+
Sbjct:    1 MEVKPEAGPSGVQSLSKWDPSAQQAFIQPAIHNKNPVRVAAILTAAGLASKGAMLVPGNLAKMVHVVALNAWMGSTLWTTFFAGITMFRNLPRQTFGKLQSKLFPLYFQLNFASILAIYIIRGCPLRS 128          
BLAST of mRNA_Ecto-sp13_S_contig1801.5522.1 vs. uniprot
Match: A0A835YZR0_9STRA (DUF4149 domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YZR0_9STRA)

HSP 1 Score: 182 bits (463), Expect = 3.360e-52
Identity = 107/212 (50.47%), Postives = 136/212 (64.15%), Query Frame = 0
Query:   50 GPSGVQSLSKWDPSAQQA---FIQPATHNKNPLRVAAILTAAGLASKGAML-VPGNLAKMVHVVALNAWMGSTLWTTFFAGITMFRNLPRQTFGKLQSKLFPMYFQLNFASILAIYIIR-------GCPLRTRAGVTLLVSLLTTLLNLVLLEPKSTSIMLQRYKLEDDKKKDSDEYKELGKTFGKFHGMSSFANLGALIGSFVYTWELASV 250
            GP GV  LS WDPS++QA   ++QPA HN NP+RVAA++ A GLA++G++      +   VHV++    +GSTL+TTF AGI MF+NLPRQTFGKLQSKLFP YF LN    LA+ +         G P    A V L  +L+  L NL +LEP+ST +ML RY+LE+  +    EY  L + FGK HGMSS  NLGAL G+  Y W LA V
Sbjct:   86 GPKGVAGLSAWDPSSRQASAKWMQPAVHNANPVRVAALIAAVGLAARGSLASASAVMPAFVHVLSFGMLVGSTLYTTFIAGIIMFKNLPRQTFGKLQSKLFPAYFCLNSMCALAMLVTLHGLSSSGGVP--ADAAVPLAAALVCNLGNLFVLEPRSTGVMLARYELENRGEAKGAEYDRLSRAFGKLHGMSSLLNLGALGGACAYAWHLARV 295          
BLAST of mRNA_Ecto-sp13_S_contig1801.5522.1 vs. uniprot
Match: A0A0G4F9E7_VITBC (DUF4149 domain-containing protein n=1 Tax=Vitrella brassicaformis (strain CCMP3155) TaxID=1169540 RepID=A0A0G4F9E7_VITBC)

HSP 1 Score: 179 bits (454), Expect = 9.060e-52
Identity = 100/197 (50.76%), Postives = 131/197 (66.50%), Query Frame = 0
Query:   57 LSKWDPSAQQAFIQPATHNKNPLRVAAILTAAGLASKGAMLVPGNLAKMVHVVALNAWMGSTLWTTFFAGITMFRNLPRQTFGKLQSKLFPMYFQLNFASILAIYIIRGCP-LRTRAGVT-LLVSLLTTLLNLVLLEPKSTSIMLQRYKLEDDKKKDSDEYKELGKTFGKFHGMSSFANLGALIGSFVYTWELASVI 251
            L +WDP   Q ++ PA HN+N +R+ A+L+   LAS   + V   L   VH++A   W+GS ++TTF AGITMFRNLPR+TFG+LQSKLFP+YFQL    ++ +    G   L  RA +  L V+L+ TL NL +LEPKST IM +RY++ED  +KD  EYK L K FGKFHG+SS  NL AL G   + W LAS+I
Sbjct:   97 LERWDP---QVWVAPAVHNRNSVRLLALLSTLLLASGSTVFVSKQLTLFVHLLAYATWLGSVIYTTFVAGITMFRNLPRKTFGRLQSKLFPLYFQLCTGMLIVLLTTGGASVLPNRAMMANLAVALVMTLANLFVLEPKSTEIMFKRYEMEDQGRKDDPEYKALAKGFGKFHGLSSLTNLIALCGGVAHGWTLASLI 290          
BLAST of mRNA_Ecto-sp13_S_contig1801.5522.1 vs. uniprot
Match: A0A7S3RBJ6_9SPIT (Hypothetical protein (Fragment) n=1 Tax=Strombidinopsis acuminata TaxID=141414 RepID=A0A7S3RBJ6_9SPIT)

HSP 1 Score: 158 bits (400), Expect = 6.820e-45
Identity = 92/187 (49.20%), Postives = 122/187 (65.24%), Query Frame = 0
Query:   66 QAFIQPATHNKNPLRVAAILTAAGLASKGAMLVPGNLAKMVHVVALNAWMGSTLWTTFFAGITMFRNLPRQTFGKLQSKLFPMYFQLNFASILAIY-----IIRGCPLRTRAGVTLLVSLLTTLLNLVLLEPKSTSIMLQRYKLEDDKKKDSDEYKELGKTFGKFHGMSSFANLGALIGSFVYTWEL 247
            QA++ PA  N    R A+I TA  LA+ G+  +   +A   H+++  +  GS ++TTFFAGITMF+NLPRQTFG+LQSKLFP+YF+L+ AS+  +      +  G  L TR       +LL TLLNL  LEP+ST +M  RY LE++ K++SDEYK   K FG  HGMSS ANLGALIG   ++W L
Sbjct:    3 QAWVPPAIWNTPAFRAASIATALALAAAGSRQLGARMAIFAHLISFGSLFGSMIYTTFFAGITMFKNLPRQTFGRLQSKLFPIYFKLHAASLCVMLGTLRAVASGGSL-TRPVYACGSALLFTLLNLFYLEPQSTKVMFTRYDLENEGKQESDEYKVAAKKFGPLHGMSSLANLGALIGVIAHSWWL 188          
BLAST of mRNA_Ecto-sp13_S_contig1801.5522.1 vs. uniprot
Match: A0A7S2ULJ3_9STRA (Hypothetical protein n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2ULJ3_9STRA)

HSP 1 Score: 151 bits (381), Expect = 3.790e-41
Identity = 96/204 (47.06%), Postives = 125/204 (61.27%), Query Frame = 0
Query:   54 VQSLSKWDPSAQQAFIQPATHNKNPLRVAAILTAAGLASKGAML--VPGNLAKMVHVVALNAWMGSTLWTTFFAGITMFRNLPRQTFGKLQSKLFPMYFQLNFASILA-IYIIRGCP--LRTRAGVTLLVSLLTTLLNLVLLEPKSTSIMLQRYKLED-DKKKDSDEYKELGKTFGKFHGMSSFANLGALIGSFVYTWELASVI 251
            V SL KWDP+    +      NK   R  AIL A  LA  G+ L  +    A  VH+++ + W GS ++TTF  GITM++NLPRQTFG+LQSKLFP YF L   +IL  I  +   P  L  RA + L  + +TTLLNL +LEPKST +M +RY+LED    KDS+ YKEL  TFGK HGMSS +NL  L  +  + + +AS +
Sbjct:   65 VPSLPKWDPTN---WTPKTFWNKPLFRAGAILAALALAGFGSPLSKISATAAATVHLLSFSTWFGSVIFTTFIGGITMYKNLPRQTFGRLQSKLFPKYFNLCAITILLQILTLSKIPDVLSKRAEIALGTAFVTTLLNLFVLEPKSTKVMFKRYELEDMPGGKDSEGYKELASTFGKLHGMSSLSNLIGLCAAVAHGFYIASAL 265          
BLAST of mRNA_Ecto-sp13_S_contig1801.5522.1 vs. uniprot
Match: A0A7S1D7W6_CYCTE (Hypothetical protein n=1 Tax=Cyclophora tenuis TaxID=216820 RepID=A0A7S1D7W6_CYCTE)

HSP 1 Score: 147 bits (370), Expect = 2.140e-39
Identity = 98/222 (44.14%), Postives = 131/222 (59.01%), Query Frame = 0
Query:   38 RMVTAMEVKPEAGPSGVQSLSKWDPSAQQAFIQPATHNKNPLRVAAILTA----AGLASKGAMLVPGNLAKMVHVVALNAWMGSTLWTTFFAGITMFRNLPRQTFGKLQSKLFPMYFQLNFASI---LAIYIIRGCPLRTRAGVTLLVSLLTTLLNLVLLEPKSTSIMLQRYKLE---DDKKKDSDEYKELGKTFGKFHGMSSFANLGALIGSFVYTWELAS 249
            +M  A    P++G   V SL +WDP+    +     HN N  R AAI+ A    +G  +K  + +    A   H++A   W G+ L+TTF AGITM+RNLPRQTFGKLQSKLFP YF L   S+   LA        L ++A   L   L+ TLLN + LEP ST++M  RY++E   D + K+S EYK+L   FGK+HGMSS ANL AL  +FV+ + +AS
Sbjct:   57 KMKQAATAPPKSG-KVVNSLPEWDPTN---WTPARLHNSNIFRAAAIVLALVWVSGSPTKS-LYMSRKAAATTHILAFGTWFGTMLYTTFVAGITMYRNLPRQTFGKLQSKLFPKYFVLCTISVILQLATVSFMPSALASKATKALGTGLVMTLLNQLWLEPTSTTVMFSRYEIENSDDPQAKESAEYKKLASDFGKYHGMSSLANLVALCAAFVHGFYIAS 273          
BLAST of mRNA_Ecto-sp13_S_contig1801.5522.1 vs. uniprot
Match: B8BU99_THAPS (DUF4149 domain-containing protein (Fragment) n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8BU99_THAPS)

HSP 1 Score: 142 bits (357), Expect = 5.590e-39
Identity = 79/147 (53.74%), Postives = 103/147 (70.07%), Query Frame = 0
Query:  106 VHVVALNAWMGSTLWTTFFAGITMFRNLPRQTFGKLQSKLFPMYFQLNFASI-LAIYIIRGCP--LRTRAGVTLLVSLLTTLLNLVLLEPKSTSIMLQRYKLEDDKKKDSDEYKELGKTFGKFHGMSSFANLGALIGSFVYTWELAS 249
            +H+++ + W G+ ++TTF AGITMF+NLPR+ FG LQSKLFP+YFQL  + I + I  +   P  L   + V+L +S   TLLNL+ LEP ST +M  RY LEDD K+DSDEY +L K+FG +HGMSS ANL ALIG  V+   LAS
Sbjct:    2 LHLLSFSTWFGTVVYTTFVAGITMFKNLPRRVFGSLQSKLFPLYFQLCTSMIGIQILTLTSMPDILSKVSEVSLGISFAATLLNLLYLEPTSTQVMFDRYDLEDDGKRDSDEYGKLAKSFGAYHGMSSLANLVALIGGIVHGVRLAS 148          
BLAST of mRNA_Ecto-sp13_S_contig1801.5522.1 vs. uniprot
Match: I0YK71_COCSC (DUF4149 domain-containing protein n=1 Tax=Coccomyxa subellipsoidea (strain C-169) TaxID=574566 RepID=I0YK71_COCSC)

HSP 1 Score: 143 bits (361), Expect = 1.730e-38
Identity = 85/192 (44.27%), Postives = 128/192 (66.67%), Query Frame = 0
Query:   68 FIQPATHNKNPLRVAAILTAAGLASKGAMLVPGNLAKMVHVVALNAWMGSTLWTTFFAGITMFRNLPRQTFGKLQSKLFPMYFQLNFAS-ILAI----YIIRGCPLRTRAGVTLLVSLLTTLLNLVLLEPKSTSIMLQRYKLEDDK-KKDSDEYKELGKTFGKFHGMSSFANLGALIGSFVYTWELASVIPV 253
             ++P+  NKN +R+A +  A  +A++    +P N+A  +H++A   W+GS +WTTF AGITMF+NLPRQTFGKLQ+KLFP YF +  A+ +L I    + + G   RT++ +TL V+ +T+L N + +EP +T++M +RY LE+   +KDS + K+L K FGKFHG+SS  NL AL     + W LAS + +
Sbjct:   46 MLEPSAFNKNWVRLAWVSAALVVAARSTEFLPVNVAVFIHLMAWGLWLGSNIWTTFIAGITMFKNLPRQTFGKLQAKLFPQYFAVAIAAGVLQIGTLAFGVPGGIARTQS-ITLGVAFVTSLANWLYVEPVATNLMFERYNLENAPGEKDSAKIKQLYKQFGKFHGISSLLNLVALGAVISHGWWLASKLSL 236          
BLAST of mRNA_Ecto-sp13_S_contig1801.5522.1 vs. uniprot
Match: A0A7S2I6I8_9STRA (Hypothetical protein n=1 Tax=Helicotheca tamesis TaxID=374047 RepID=A0A7S2I6I8_9STRA)

HSP 1 Score: 144 bits (363), Expect = 3.760e-38
Identity = 93/208 (44.71%), Postives = 123/208 (59.13%), Query Frame = 0
Query:   54 VQSLSKWDPSAQQAFIQPATHNKNPLRVAAILTAAGLAS----KGAMLVPGNLAKMVHVVALNAWMGSTLWTTFFAGITMFRNLPRQTFGKLQSKLFPMYFQLNFASILA-IYIIRGCP--LRTRAGVTLLVSLLTTLLNLVLLEPKSTSIMLQRYKLEDDKK-KDSDEYKELGKTFGKFHGMSSFANLGALIGSFVYTWELASVIPV 253
            V  L  WDP+    +     HN    R +A+L   G+AS       + V    +  +H++A   W GS  +TTF  GITMF+NLPR+TFGKLQSKLFP+YF L   +IL  I  +   P  +  +A V L VSL+ T+LNL  LEP ST IM +RY LE+    KD+D+YK+L   FGKFHGMSS  NL AL G+  + + LA+ + V
Sbjct:   92 VPDLPDWDPTN---WTPKRLHNTAFFRFSAMLATIGVASYAIGSSPVKVSAKASATIHILAFATWFGSMAYTTFIGGITMFKNLPRKTFGKLQSKLFPIYFNLCAITILLQILTLNFLPTVVTKKATVALGVSLVMTVLNLFYLEPTSTKIMFERYALEETSGGKDTDKYKKLAANFGKFHGMSSLTNLIALCGAIAHGFYLATALVV 296          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig1801.5522.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LRR6_ECTSI3.500e-16292.89DUF4149 domain-containing protein n=1 Tax=Ectocarp... [more]
A0A6H5KHA9_9PHAE4.170e-8196.88DUF4149 domain-containing protein n=1 Tax=Ectocarp... [more]
A0A835YZR0_9STRA3.360e-5250.47DUF4149 domain-containing protein n=1 Tax=Tribonem... [more]
A0A0G4F9E7_VITBC9.060e-5250.76DUF4149 domain-containing protein n=1 Tax=Vitrella... [more]
A0A7S3RBJ6_9SPIT6.820e-4549.20Hypothetical protein (Fragment) n=1 Tax=Strombidin... [more]
A0A7S2ULJ3_9STRA3.790e-4147.06Hypothetical protein n=1 Tax=Attheya septentrional... [more]
A0A7S1D7W6_CYCTE2.140e-3944.14Hypothetical protein n=1 Tax=Cyclophora tenuis Tax... [more]
B8BU99_THAPS5.590e-3953.74DUF4149 domain-containing protein (Fragment) n=1 T... [more]
I0YK71_COCSC1.730e-3844.27DUF4149 domain-containing protein n=1 Tax=Coccomyx... [more]
A0A7S2I6I8_9STRA3.760e-3844.71Hypothetical protein n=1 Tax=Helicotheca tamesis T... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR025423Domain of unknown function DUF4149PFAMPF13664DUF4149coord: 110..202
e-value: 1.9E-22
score: 79.5
NoneNo IPR availablePANTHERPTHR23241:SF102LD23009Pcoord: 99..250
NoneNo IPR availablePANTHERPTHR23241LATE EMBRYOGENESIS ABUNDANT PLANTS LEA-RELATEDcoord: 99..250
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 3..14
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 113..133
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 15..19
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 134..144
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 170..190
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..2
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 165..169
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 191..253
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 20..112
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 145..164
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..19
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..19
score: 0.767
NoneNo IPR availableTMHMMTMhelixcoord: 81..103
NoneNo IPR availableTMHMMTMhelixcoord: 145..167
NoneNo IPR availableTMHMMTMhelixcoord: 172..190
NoneNo IPR availableTMHMMTMhelixcoord: 229..251
NoneNo IPR availableTMHMMTMhelixcoord: 108..130

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig1801contigEcto-sp13_S_contig1801:6333..10960 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig1801.5522.1mRNA_Ecto-sp13_S_contig1801.5522.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig1801 6333..10960 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig1801.5522.1 ID=prot_Ecto-sp13_S_contig1801.5522.1|Name=mRNA_Ecto-sp13_S_contig1801.5522.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=254bp
MRLLLLMSAGSFLGGLTYAFCPMRVPHRAAVAPGGVRRMVTAMEVKPEAG
PSGVQSLSKWDPSAQQAFIQPATHNKNPLRVAAILTAAGLASKGAMLVPG
NLAKMVHVVALNAWMGSTLWTTFFAGITMFRNLPRQTFGKLQSKLFPMYF
QLNFASILAIYIIRGCPLRTRAGVTLLVSLLTTLLNLVLLEPKSTSIMLQ
RYKLEDDKKKDSDEYKELGKTFGKFHGMSSFANLGALIGSFVYTWELASV
IPV*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR025423DUF4149