prot_Ecto-sp13_S_contig18000.5517.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig18000.5517.1
Unique Nameprot_Ecto-sp13_S_contig18000.5517.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length109
Homology
[Close]
BLAST of mRNA_Ecto-sp13_S_contig18000.5517.1 vs. uniprot
Match: A0A6H5L5S3_9PHAE (Fe2OG dioxygenase domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L5S3_9PHAE)

HSP 1 Score: 150 bits (380), Expect = 4.380e-40
Identity = 83/99 (83.84%), Postives = 87/99 (87.88%), Query Frame = 0 
Query:   12 AVLIDPGRFPLLLGRRFHESVVRGLAANLLEVEVESPVVEYCEALITQGVDVQRQALKVLEPALNDMEDENHLPDFHEISS-SSSSSKGLASESESERD 109
            AVLIDPG FPLLLGRRFHESVVRGLAANLLEVEVESPVVEYCEAL+TQG DVQRQALKVLEP LNDMEDE+  PD  EI   SSSSS G+AS+SE ERD
Sbjct:  219 AVLIDPGSFPLLLGRRFHESVVRGLAANLLEVEVESPVVEYCEALVTQGDDVQRQALKVLEPTLNDMEDESDFPDSDEIIIVSSSSSNGVASDSEGERD 317
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig18000.5517.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5L5S3_9PHAE4.380e-4083.84Fe2OG dioxygenase domain-containing protein (Fragm... [more]
back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig18000contigEcto-sp13_S_contig18000:1021..2810 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig18000.5517.1mRNA_Ecto-sp13_S_contig18000.5517.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig18000 1019..2810 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig18000.5517.1 ID=prot_Ecto-sp13_S_contig18000.5517.1|Name=mRNA_Ecto-sp13_S_contig18000.5517.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=109bp
PVEEGGRPGGGAVLIDPGRFPLLLGRRFHESVVRGLAANLLEVEVESPVV
EYCEALITQGVDVQRQALKVLEPALNDMEDENHLPDFHEISSSSSSSKGL
ASESESERD
back to top