mRNA_Ecto-sp13_S_contig1800.5516.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig1800.5516.1 vs. uniprot
Match: D7FVG9_ECTSI (Similar to ankyrin 2,3/unc44 n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FVG9_ECTSI) HSP 1 Score: 537 bits (1383), Expect = 4.810e-191 Identity = 316/325 (97.23%), Postives = 322/325 (99.08%), Query Frame = 1
Query: 1 MADDEALFSSVSRGDLARTQALLAAGASVDGSRKLDCCPLAVAAAQGDLDMTSLLIERGAKLDLGAPRDVHNRLTGALTMAEGARPIHTAIGSGQYETFRLLMRAGADPNVANVDGFTPLMSACLVQRVGPHRASIVRELLDRGADPAMVDTYDLTAMHFAAGKGRVELIDMLAAKAPATLHQAGKNGFTPLGKAAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXTSRSRCPLNVAMEARHWNVVDVLLDNLDPIKSSVDFGTAISSALVTKRARLLSRLVSAVGEERKQKKFLAGMTFSSSPILHIAAAQADPLTTSVLLAAGA 975
MADDEALFSSVSRGDLARTQALLAAGASVDGSRKLDCCPLAVAAAQGDLDMTSLLIERGAKLDLGAPRDVHNRLTG+LTMA+GARPIHTAIGSGQYETFRLLMRAGADPNVANVDGFTPLMSACLVQRVGPHRASIVRELLD GADPAMVDTYDLTAMHFAAGKGRVELIDMLAAKAPATLH+AG++GFTPLGKAAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXTSRSRCPLNVAMEARHWNVVDVLLDNLDPIKSSVDFGTAISSALVTKRARLLSRLVSAVGEERKQKK LAGMTFSSSPILHIA AQA+PLTTSVLLAAGA
Sbjct: 1 MADDEALFSSVSRGDLARTQALLAAGASVDGSRKLDCCPLAVAAAQGDLDMTSLLIERGAKLDLGAPRDVHNRLTGSLTMAKGARPIHTAIGSGQYETFRLLMRAGADPNVANVDGFTPLMSACLVQRVGPHRASIVRELLDGGADPAMVDTYDLTAMHFAAGKGRVELIDMLAAKAPATLHRAGRDGFTPLGKAAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXTSRSRCPLNVAMEARHWNVVDVLLDNLDPIKSSVDFGTAISSALVTKRARLLSRLVSAVGEERKQKKSLAGMTFSSSPILHIAVAQANPLTTSVLLAAGA 325
BLAST of mRNA_Ecto-sp13_S_contig1800.5516.1 vs. uniprot
Match: A0A6H5JSC7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JSC7_9PHAE) HSP 1 Score: 143 bits (360), Expect = 1.220e-34 Identity = 110/309 (35.60%), Postives = 152/309 (49.19%), Query Frame = 1
Query: 67 LAAGASVDGSRKLDCCPLAVAAAQGDLDMTSLLIERGAKLDLGAPRDVHNRLTGALTMAEGARPIHTAIGSGQYETFRLLMRAGADPNVANVDGFTPLMSACLVQRV--GPHRASIVRELLDRGADPAMVDTYDLTAMHFAAGKGRVELIDMLAAKAPATLHQAGKNGFTPLGKAAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXTSRSRCPLNVAMEARHWNVVDVLLDN--LDPIKSSVDFGTAISSALVTK--RARLLSRLVSAVGEERKQKKFLAGMTFSSSPILHIAAAQADPLTTSVLLAAGA 975
LAAGASVDGS +LD P+ AAA G + M LLI+R A +DLG+ D+ G + +G R +H AI + FRLL++AGADP+ AN G TPLM C+++ G RA + RE TA+ FAA + + +LID+L KAP TL++A +G TPL AA + CPL A+ H VV VLL + ++ I A+ +A + RA ++ L+SA G ER+ A + P+LH A + + T VLLAAGA
Sbjct: 138 LAAGASVDGSSELDWRPIIAAAASGSVGMADLLIKRQANVDLGSLNDLRCS-DGLEVLGKGVRALHVAINHYHVDVFRLLLKAGADPDSANGKGLTPLMLTCILEDSARGEQRAVMAREXXXXXXXXXXXXXXXKTALGFAAARDQTDLIDILLQKAPTTLNRATPDGLTPLYAAAMSGKGKAVSHLLSAGARQPPAS-------AEKDMCPLVAAVRENHQEVVRVLLTDRGMEAIDGPDVIPRAVGAAASARKGRASIVRMLLSAEGHEREGH--WARCRYKEDPVLHCAVSFGNISATRVLLAAGA 436
BLAST of mRNA_Ecto-sp13_S_contig1800.5516.1 vs. uniprot
Match: D8LSK8_ECTSI (Ankyrin n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LSK8_ECTSI) HSP 1 Score: 137 bits (344), Expect = 1.810e-32 Identity = 109/309 (35.28%), Postives = 150/309 (48.54%), Query Frame = 1
Query: 67 LAAGASVDGSRKLDCCPLAVAAAQGDLDMTSLLIERGAKLDLGAPRDVHNRLTGALTMAEGARPIHTAIGSGQYETFRLLMRAGADPNVANVDGFTPLMSACLVQRV--GPHRASIVRELLDRGADPAMVDTYDLTAMHFAAGKGRVELIDMLAAKAPATLHQAGKNGFTPLGKAAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXTSRSRCPLNVAMEARHWNVVDVLLDN--LDPIKSSVDFGTAISSALVTK--RARLLSRLVSAVGEERKQKKFLAGMTFSSSPILHIAAAQADPLTTSVLLAAGA 975
LAAGASVDGS +LD P+ AAA + M LLI+R A +DLG+ D+ G + +G R +H AI + FRLL++AGADP+ AN G TPLM C+++ G RA + RE TA+ FAA + + LID+L KAP TL++A +G TPL AA + CPL A+ H VV VLL + + I + A+ +A + RA ++ L+SA G ER+ A + P+LH A + + T VLLAAGA
Sbjct: 130 LAAGASVDGSSELDWRPIIAAAASCKVGMAELLIKRKADVDLGSLNDLRCS-DGLEVLGKGVRALHVAINHYNVDVFRLLLKAGADPDSANGKGLTPLMLTCILEDSARGEQRAVMAREXXXXXXXXXXXXXXXKTALGFAAARDQTNLIDILLQKAPTTLNRATPDGLTPLYAAAMSGKGKAVSHLLSAGARQPPAS-------AEKDMCPLVAAVRENHQEVVRVLLTDRGMKAIGGADVIPRAVGAAASARKGRASIVRMLLSAEGHEREGH--WARCRYKEDPVLHSAVSFGNISATRVLLAAGA 428
BLAST of mRNA_Ecto-sp13_S_contig1800.5516.1 vs. uniprot
Match: D8LDZ2_ECTSI (Similar to ankyrin 2,3/unc44 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LDZ2_ECTSI) HSP 1 Score: 107 bits (266), Expect = 1.820e-22 Identity = 95/322 (29.50%), Postives = 144/322 (44.72%), Query Frame = 1
Query: 19 LFSSVSRGDLARTQALLAAGASVDGSRKLDCCPLAVAAAQGDLDMTSLLIERGAKLDLGAPRDVH-NRLTGALTMAEGARPIHTAIGSGQYETFRLLMRAGADPNVANVDGFTPLMSACLVQ-RVGPHRASIVRELLDRGADPAMVDTYDLTAMHFAAGKGRVELIDMLAAKAPATLHQAGKNGFTPLGKAAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXTSRSRCPLNVAMEARHWNVVDVLLDN-LDPIKSSVDFGTAISSALVTKRARLLSRLVSAVGEERKQKKFLAGMTFSSSPILHIAAAQADPLTTSVLLAAGA 975
L V +G L +L AGA+ DG+ + PL +AA +G +D+ LLI+ GA LD + D + TG L G P+H A+ + RLL+ AGADPN+A+ G TPLM CL R + + TA+H AA +L+ +L ++AP+T++ K G T L AA+ L +A+E H VV VLLD + + + A+ +++ + R+L L+ GE+++ K T +P LH+AAA + S+LL AGA
Sbjct: 10 LLHHVEKGSLQGAIEMLKAGANADGTSEAATSPLFLAANRGRIDILKLLIDNGADLDGTSSLDKFADGFTGNLPFEGGTTPLHGALAGENLDALRLLLLAGADPNLADGKGCTPLMMTCLKYFRAKNYVLTAXXXXXXXXXXXXXXXXXXXTALHVAATFNAPDLLGLLLSRAPSTVNLPNKKGVTALCYAASEGMEVAVSCLLSAGARDNPSLFANGIGS-------LLIAVELGHEQVVRVLLDRGVQAVGGELAMSYALRRSILKRFPRILQMLLDVEGEQKRVKWARLRHT-DGTPALHLAAACESLVAASILLQAGA 323
BLAST of mRNA_Ecto-sp13_S_contig1800.5516.1 vs. uniprot
Match: A0A143PKL5_LUTPR (Ankyrin repeat protein n=1 Tax=Luteitalea pratensis TaxID=1855912 RepID=A0A143PKL5_LUTPR) HSP 1 Score: 77.4 bits (189), Expect = 4.270e-12 Identity = 60/160 (37.50%), Postives = 79/160 (49.38%), Query Frame = 1
Query: 139 GDLDMTSLLIERGAKLDLGAPRDVHNRLTGALTMAEGARPIHTAIGSGQYETFRLLMRAGADPNVANVDGFTPLMSAC-LVQR-------VGPHRASIVRELLDRGADPAMVDTYDLTAMHFAAGKGRVELIDMLAAKAPA--TLHQAGKNGFTPLGKAA 588
G LD+ L+ RGA ++ A L GA P A + E R+L++AGADP++ NVDG TPLM A L R P ++ LLD GADP VD + TAMH AA K + + MLAAK +Q + G+TPL +A
Sbjct: 301 GSLDLVRALVARGANVN--ARMTKRPNLNNTRLDERGATPFLLAALTADAELMRVLVKAGADPSIPNVDGSTPLMVAAGLATRSPGEDAGTEPEVLEALQLLLDLGADPNAVDRHGETAMHGAAYKNLPKAVRMLAAKGARIDVWNQPDEFGWTPLAISA 458
BLAST of mRNA_Ecto-sp13_S_contig1800.5516.1 vs. uniprot
Match: A0A5Q4GLS9_9GAMM (Ankyrin repeat domain-containing protein n=1 Tax=Wenzhouxiangella sp. TaxID=1979961 RepID=A0A5Q4GLS9_9GAMM) HSP 1 Score: 65.9 bits (159), Expect = 1.460e-8 Identity = 61/186 (32.80%), Postives = 80/186 (43.01%), Query Frame = 1
Query: 16 ALFSSVSRGDLARTQALLAAGASVDGSRKLDCCPLAVAAAQGDLDMTSLLIERGAKLDLGAPRDVHNRLTGALTMAEGARPIHTAIGSGQYETFRLLMRAGADPNVANVDGFTPLMSACLVQRVGPHRASIVRELLDRGADPAMVDTYDLTAMHFAAGKGRVELIDMLAAKAPATLHQAGKNGFTP 573
AL ++ + GD LLAAGA + +L L A GDLD L++ G +D A GA+TMA + E LL AGADPN A++ G+TPLM A HR S++ L G D V+ TA+H A G EL+ L A N +TP
Sbjct: 116 ALMAAAAAGDAGLVDELLAAGADPGATNRLGGTVLMYAIGGGDLDTVRRLLDTGIAVDGQASNG-----WGAVTMAAA---------KNEGEMLALLGAAGADPNPADIYGWTPLMRAAYEG----HRDSVMALLELPGLDLGRVNNSGQTALHLAVISGSAELVQALLDHG--ARQTADSNDYTP 281
BLAST of mRNA_Ecto-sp13_S_contig1800.5516.1 vs. uniprot
Match: UPI001C47D4FD (ankyrin repeat domain-containing protein n=1 Tax=Comamonas fluminis TaxID=2796366 RepID=UPI001C47D4FD) HSP 1 Score: 66.6 bits (161), Expect = 1.470e-8 Identity = 60/191 (31.41%), Postives = 90/191 (47.12%), Query Frame = 1
Query: 22 FSSVSRGDLARTQALLAAGASVDGSRKLDC----CPLAVAAAQGDLDMTSLLIERGAKLDLGAPRDVHNRLTGALTMAEGARPIHTAIGSGQYETFRLLMRAGADPNVANVDGFTPLMSA---------------CLVQRVGP----HRASI--VRELLDRGADPAMVDTYDLTAMHFAAGKGRVELIDML 519
F +V RGD A+ ++ LA G V+ + PL VAAA G+ +M L+++GAK++L R L A+ + G+ I T LL++AGADPNV + +GF PL A ++ P H + +R LL GA+P VD TA+H AA G++ + +L
Sbjct: 30 FRAVERGDTAKVRSWLARGMDVNSGQSYGFDEGRTPLIVAAASGNAEMVDFLLKQGAKVNLRESRSQETALFRAVRFS-GSEGISDHYRIDFPRTVTLLLKAGADPNVPDGNGFVPLYFAPSTVILSMXXXXXXXXXIRTERPPLLEHAGDVERLRLLLKAGANPNAVDASGRTALHLAA-LGQIAAVRLL 218
BLAST of mRNA_Ecto-sp13_S_contig1800.5516.1 vs. uniprot
Match: A0A523DJR2_9BACT (Uncharacterized protein n=1 Tax=Acidobacteria bacterium TaxID=1978231 RepID=A0A523DJR2_9BACT) HSP 1 Score: 65.5 bits (158), Expect = 1.750e-8 Identity = 54/163 (33.13%), Postives = 76/163 (46.63%), Query Frame = 1
Query: 136 QGDLDMTSLLIERGAKLDLGAPRDV------------HNRLTGALTMAEGARPIHTAIGSGQYETFRLLMRAGADPNVANVDGFTPLMSACLV-------QRVGPHRASIVRELLDRGADPAMVDTYDLTAMHFAAGKGRVELIDMLAAKAPAT--LHQAGKN 561
Q ++D LL A LD GA + HNRL GA P A + E+ RLL+ AGADP++A DG TPLM + + Q + V L++ GAD VDT TA+H AA G E+++ L A+ A +++AG +
Sbjct: 81 QEEIDAVQLL---AALLDAGADPNARVARRLWFSPTSHNRL---WINPAGATPFWRAAQASDVESMRLLLAAGADPDLATFDGTTPLMVSAGIGWRGNFSQTAPDSWMTAVHFLMEIGADVTAVDTNGYTALHGAAALGNDEMVEFLVARGAAVDAINEAGNS 237
BLAST of mRNA_Ecto-sp13_S_contig1800.5516.1 vs. uniprot
Match: A0A6H5I1C3_9HYME (Uncharacterized protein n=1 Tax=Trichogramma brassicae TaxID=86971 RepID=A0A6H5I1C3_9HYME) HSP 1 Score: 65.1 bits (157), Expect = 5.110e-8 Identity = 48/170 (28.24%), Postives = 73/170 (42.94%), Query Frame = 1
Query: 247 GARPIHTAIGSGQYETFRLLMRAGADPNVANVDGFTPLMSACLVQRVGPHRASIVRELLDRGADPAMVDTYD---LTAMHFAAGKGRVELIDMLAAKAPATLHQAGKNGFTPLGKAAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXTSRSRCPLNVAMEARHWNVVDVLL 747
G P+H AI +G+ + +LMR GA+PN+A+ +GFTPL C + ++ E D+ P VD D T +H A G ++ + L K A L+ A G TPL +A + + PL+ A+ RH V ++LL
Sbjct: 101 GKTPLHVAIKNGKIKLVEILMRRGANPNLADKNGFTPLHIVCQSKYDDVDLLKMLFEAADKFNKPLQVDARDKSNCTPLHLALNCGHEQIAEWLLRKG-ADLNLANAEGSTPLHLISAGKMDYVDLLKAFFEISDEQTRTVKVDARDNEGKTPLHYAISHRHKKVFELLL 269
BLAST of mRNA_Ecto-sp13_S_contig1800.5516.1 vs. uniprot
Match: A0A6H5IIW0_9HYME (Uncharacterized protein n=1 Tax=Trichogramma brassicae TaxID=86971 RepID=A0A6H5IIW0_9HYME) HSP 1 Score: 63.5 bits (153), Expect = 1.980e-7 Identity = 43/127 (33.86%), Postives = 62/127 (48.82%), Query Frame = 1
Query: 193 GAPRDVHNRLTGALTMAEGARPIHTAIGSGQYETFRLLMRAGADPNVANVDGFTPLMSACLVQRVGPHRASIVRELLDRGADPAMVDT---YDLTAMHFAAGKGRVELIDMLAAKAPATLHQAGKNG 564
G D L T + G P+HTAI + LL+R GADPN++N+ GFTPL CL + ++ EL D+ P VDT +D T +H A + E+ + L + A L+ A + G
Sbjct: 327 GLSHDEFRPLQVNATDSAGETPLHTAIANENDIAVELLLRNGADPNLSNLKGFTPLHLVCLGNKDKARLVEMIFELSDKKYHPVQVDTKDNWDETPLHKALHRDYKEVAESLLRRG-ADLNLADRKG 452 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig1800.5516.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig1800.5516.1 >prot_Ecto-sp13_S_contig1800.5516.1 ID=prot_Ecto-sp13_S_contig1800.5516.1|Name=mRNA_Ecto-sp13_S_contig1800.5516.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=325bp MADDEALFSSVSRGDLARTQALLAAGASVDGSRKLDCCPLAVAAAQGDLDback to top mRNA from alignment at Ecto-sp13_S_contig1800:13487..14461- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig1800.5516.1 ID=mRNA_Ecto-sp13_S_contig1800.5516.1|Name=mRNA_Ecto-sp13_S_contig1800.5516.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=975bp|location=Sequence derived from alignment at Ecto-sp13_S_contig1800:13487..14461- (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig1800:13487..14461- >mRNA_Ecto-sp13_S_contig1800.5516.1 ID=mRNA_Ecto-sp13_S_contig1800.5516.1|Name=mRNA_Ecto-sp13_S_contig1800.5516.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=975bp|location=Sequence derived from alignment at Ecto-sp13_S_contig1800:13487..14461- (Ectocarpus species13 EcNAP12_S_4_19m)back to top |