prot_Ecto-sp13_S_contig17999.5509.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig17999.5509.1
Unique Nameprot_Ecto-sp13_S_contig17999.5509.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length161
Homology
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BLAST of mRNA_Ecto-sp13_S_contig17999.5509.1 vs. uniprot
Match: D8LT08_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LT08_ECTSI)

HSP 1 Score: 211 bits (538), Expect = 2.530e-61
Identity = 127/160 (79.38%), Postives = 132/160 (82.50%), Query Frame = 0 
Query:    1 MGGWSGDFVPAGGXXXXXXXGATRKLKSDTGEEDLASAMVVFPGLLRSNDAIPAGVRDAVISAVLAATAAEDAKESGRKQPVGGVGHGEKKEREGGTSVKXXXXXXXXXXXXXXXXXXXXXGAGGAMLNGDGTSAVAAAITAAVAEEEGWETDDSADDFE 160
            +GGWSGDFVPAGGXXXXX  GATR+LKSDTGEEDLASAMVVFPGLLRSNDAIPAGVRDAVISAVLAATAAEDAKESGRKQPVGGVGHGE K REG TS K                     GAGGA+L+GDGTSAVAAA+ AAVAEEEGWETDDSADDFE
Sbjct:  652 LGGWSGDFVPAGGXXXXX--GATRRLKSDTGEEDLASAMVVFPGLLRSNDAIPAGVRDAVISAVLAATAAEDAKESGRKQPVGGVGHGENKGREGDTSGKETGQSARPDGPGSRQKRAGRKGAGGAVLDGDGTSAVAAAVPAAVAEEEGWETDDSADDFE 809
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BLAST of mRNA_Ecto-sp13_S_contig17999.5509.1 vs. uniprot
Match: A0A6H5KIL3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KIL3_9PHAE)

HSP 1 Score: 164 bits (415), Expect = 5.710e-44
Identity = 129/159 (81.13%), Postives = 136/159 (85.53%), Query Frame = 0 
Query:    2 GGWSGDFVPAGGXXXXXXXGATRKLKSDTGEEDLASAMVVFPGLLRSNDAIPAGVRDAVISAVLAATAAEDAKESGRKQPVGGVGHGEKKEREGGTSVKXXXXXXXXXXXXXXXXXXXXXGAGGAMLNGDGTSAVAAAITAAVAEEEGWETDDSADDFE 160
            GGWSGDFVP  GXXXXXXX   R LKSDTGEEDLA+AMVVFPGLLRSNDA+PAGVRDAVISAVLAA AA++A+ES RKQP+GGVGHGE KEREGGTS KXXXXXXXXXXXXXXXXXXXXX           T A AAA+TAAVAEEEGWETDDSADDFE
Sbjct:  742 GGWSGDFVPTCGXXXXXXXXXXR-LKSDTGEEDLAAAMVVFPGLLRSNDAMPAGVRDAVISAVLAARAADNAEESRRKQPLGGVGHGENKEREGGTSGKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTFAAAAAVTAAVAEEEGWETDDSADDFE 899
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig17999.5509.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LT08_ECTSI2.530e-6179.38Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KIL3_9PHAE5.710e-4481.13Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig17999contigEcto-sp13_S_contig17999:1726..2208 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig17999.5509.1mRNA_Ecto-sp13_S_contig17999.5509.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig17999 1040..2807 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig17999.5509.1 ID=prot_Ecto-sp13_S_contig17999.5509.1|Name=mRNA_Ecto-sp13_S_contig17999.5509.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=161bp
MGGWSGDFVPAGGGGGGGGSGATRKLKSDTGEEDLASAMVVFPGLLRSND
AIPAGVRDAVISAVLAATAAEDAKESGRKQPVGGVGHGEKKEREGGTSVK
ETGPSARQDGPGSRQKGAGRKGAGGAMLNGDGTSAVAAAITAAVAEEEGW
ETDDSADDFE*
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