mRNA_Ecto-sp13_S_contig17991.5505.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig17991.5505.1 vs. uniprot
Match: A0A6H5JXA5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JXA5_9PHAE) HSP 1 Score: 634 bits (1636), Expect = 6.290e-223 Identity = 346/404 (85.64%), Postives = 353/404 (87.38%), Query Frame = 1
Query: 4 VCQRVAELYPKNYYAWTQRSWVVLRAVGGARADAGAGQEGLPGEDTPAAAAAAELLEREIEFVDRWLTSHVSDHSALNHRKNVFSALAAMSPASDEMARLGLVDKERSANSKLLRDYPGHESLWCYRRFVCQARLVTAPSSVAGPTTAXXRKSXXXXXXXXDNDRRGLYDWEAWGRAVTEWHDGCVREDNKAAAVEDSDEYSEEEXXDTTATEEADFEEAEGALPGAPSGGGLLATFLGQEARFALKCATDKGAWQFDRQRRHALAYLAFLSYATDRIVLGSGYHQEQPRRSSSRERRSQNGNNITQQPVGATGFAGSCRDVAGHVGEAESTAGGCLTYCEVTGAPKLTFPLALLPSPEASVHAGGPERDDSRSGVGGGVAGRGSGGSACPSSGVVAVEESAAV 1215
VCQRVAELYPKNYYAWTQRSWVVLRAVGGARA+AGAGQEG PG+DTP A AAAELLEREIEFVDRWLTSHVSDHSALNHRKNVFSALAAMSPASDEMARLGLVDKERSANSKLLRDYPGHESLWCYRRFVCQ RLVTAPSSV GPT AXX XXXXXXXX RGLYDWEAWGRAVTEW+DGCVRED+KAAAVEDSDE E+E DTTATEEADFEEAEGALPGAPSGGGLLATFLGQEARFALKCATDKGAWQFDRQRRHALAYLAFLSYA DRIV GS +H GNNI QQPVGA GF GS R VAGHVGEAE TAGGCLTYCEVTGAPKLTFPLALLPSPEASV G E DD+RS VGG VAGRGSGG ACPSSGVVA EESAAV
Sbjct: 221 VCQRVAELYPKNYYAWTQRSWVVLRAVGGARAEAGAGQEGSPGKDTPTAPAAAELLEREIEFVDRWLTSHVSDHSALNHRKNVFSALAAMSPASDEMARLGLVDKERSANSKLLRDYPGHESLWCYRRFVCQVRLVTAPSSVTGPTAAXXXXXXXXXXXXXXXXHRGLYDWEAWGRAVTEWNDGCVREDDKAAAVEDSDEDLEQEHEDTTATEEADFEEAEGALPGAPSGGGLLATFLGQEARFALKCATDKGAWQFDRQRRHALAYLAFLSYAIDRIVAGSRHHXXXXXXXXXXXXXXXXGNNIIQQPVGAAGFGGSRRGVAGHVGEAEVTAGGCLTYCEVTGAPKLTFPLALLPSPEASVDERGREGDDTRSNVGGDVAGRGSGGGACPSSGVVAAEESAAV 624
BLAST of mRNA_Ecto-sp13_S_contig17991.5505.1 vs. uniprot
Match: D7G9E1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G9E1_ECTSI) HSP 1 Score: 581 bits (1498), Expect = 8.740e-202 Identity = 318/380 (83.68%), Postives = 323/380 (85.00%), Query Frame = 1
Query: 4 VCQRVAELYPKNYYAWTQRSWVVLRAVGGARADAGAGQEGLPGEDTPAAAAAAELLEREIEFVDRWLTSHVSDHSALNHRKNVFSALAAMSPASDEMARLGLVDKERSANSKLLRDYPGHESLWCYRRFVCQARLVTAPSSVAGPTTAXXRKSXXXXXXXXDNDRRGLYDWEAWGRAVTEWHDGCVREDNKAAAVEDSDEYSEEEXXDTTATEEADFEEAEGALPGAPSGGGLLATFLGQEARFALKCATDKGAWQFDRQRRHALAYLAFLSYATDRIVLGS-GYHQEQPRRSSSRERRSQNGNNITQQPVGATGFAGSCRDVAGHVGEAESTAGG-CLTYCEVTGAPKLTFPLALLPSPEASVHAGGPERDDSRSGVGG 1137
VCQRVAELYPKNYYAWTQRSWVVLRAVGGARADA AGQEGLPGEDTP A AAAELLEREIEFVDRWLTSHVSDHSALNHRKNVFSALAAMSPASDEMARLGLVDKERSANSKLLRDYPGHESLWCYRRFVCQARLVTAPSSVAGP XX XXXXXXX D DRRG YDWEAWGRAVTEWHDGCVRED++AAA ED XX TTATEE DFEEAEGALPGAPSGGG LATFLGQEARFALKCATDKGAWQFDRQRRHALAYLAFLS+ATDRIVLGS TQ+P GATGFAGSC+DVAGHVGEAESTAGG CLTYCEVTGAPKL FPLALLPSPEAS HAGGP DSR VGG
Sbjct: 233 VCQRVAELYPKNYYAWTQRSWVVLRAVGGARADASAGQEGLPGEDTPTAPAAAELLEREIEFVDRWLTSHVSDHSALNHRKNVFSALAAMSPASDEMARLGLVDKERSANSKLLRDYPGHESLWCYRRFVCQARLVTAPSSVAGPAAXXXXXXXXXXXXXSDKDRRGSYDWEAWGRAVTEWHDGCVREDDRAAAAEDXXXXXXXXXXXTTATEETDFEEAEGALPGAPSGGGPLATFLGQEARFALKCATDKGAWQFDRQRRHALAYLAFLSHATDRIVLGSHXXXXXXXXXXXXXXXXXXXXXXXTQRPAGATGFAGSCKDVAGHVGEAESTAGGGCLTYCEVTGAPKLKFPLALLPSPEASAHAGGPAGHDSRGSVGG 612
BLAST of mRNA_Ecto-sp13_S_contig17991.5505.1 vs. uniprot
Match: A0A4P9Z581_9FUNG (Uncharacterized protein n=1 Tax=Syncephalis pseudoplumigaleata TaxID=1712513 RepID=A0A4P9Z581_9FUNG) HSP 1 Score: 76.3 bits (186), Expect = 6.590e-12 Identity = 48/146 (32.88%), Postives = 73/146 (50.00%), Query Frame = 1
Query: 4 VCQRVAELYPKNYYAWTQRSWVVLRAVGGARADAGAGQEGLPGEDTPAAAAAAELLEREIEFVDRWLTSHVSDHSALNHRKNVFSALAAMSPASDEMARLGLVDKERSANSKLLRDYPGHESLWCYRRFVCQARLVTAPSSVAGPT 441
+ +R L+P+NYYAWTQR+W+V A + DT A L++ E F +W H+SD +A ++R+ + +A A + EM R+ L++ YPGHE++WC+ R V A L+ SSVA T
Sbjct: 97 LTERAFTLHPRNYYAWTQRAWLVDHA------------RAVDATDTDIY---ARLIDAEGVFTAQWTAMHLSDSAAWHYRRRILAATATVHVWQGEMERV----------YDLVKRYPGHEAIWCHLRLV--ATLLLEASSVADRT 215
BLAST of mRNA_Ecto-sp13_S_contig17991.5505.1 vs. uniprot
Match: D0NLL1_PHYIT (Uncharacterized protein n=2 Tax=Phytophthora infestans TaxID=4787 RepID=D0NLL1_PHYIT) HSP 1 Score: 75.9 bits (185), Expect = 2.490e-11 Identity = 43/138 (31.16%), Postives = 67/138 (48.55%), Query Frame = 1
Query: 1 QVCQRVAELYPKNYYAWTQRSWVVLRAVGGARADAGAGQEGLPGEDTPAAAAAAELLEREIEFVDRWLTSHVSDHSALNHRKNVFSALAAM--SPASDEMARLGLVDKERSANSKLLRDYPGHESLWCYRRFVCQARL 408
+VC R+AE P+NY+AW+ R W+V R G L +E+E ++ W +HV+DHS NHR++ + L + + A ++ E S ++ YP HE+LWC+RR+V Q L
Sbjct: 173 EVCSRLAEQKPRNYHAWSFRHWIVSRLPLG-------------------------LARKELEDMEIWCRTHVTDHSGWNHRQHTLNELLKKYRRDSGEVDASHKVLLAEYKFVSDIMASYPSHEALWCHRRYVIQYLL 285
BLAST of mRNA_Ecto-sp13_S_contig17991.5505.1 vs. uniprot
Match: A0A6A7GFL8_9CRUS (Protein prenyltransferase (Fragment) n=1 Tax=Hirondellea gigas TaxID=1518452 RepID=A0A6A7GFL8_9CRUS) HSP 1 Score: 75.9 bits (185), Expect = 2.730e-11 Identity = 50/158 (31.65%), Postives = 65/158 (41.14%), Query Frame = 1
Query: 4 VCQRVAELYPKNYYAWTQRSWVVLRAVGGARADAGAGQEGLPGEDTPAAAAAAELLEREIEFVDRWLTSHVSDHSALNHRKNVFSALAAMSPASDEMARLGLVDKERSANSK----------------------------LLRDYPGHESLWCYRRFV 393
+C +VAE+YPKNYYAWT R W+V E L++E+ V RW HVSDH +HR+ V S + L D+ S+NS ++R YPGHESLWCYRRF+
Sbjct: 222 ICAQVAEIYPKNYYAWTHRQWLVKLFD-------------------------FEELKQELRRVSRWNDLHVSDHCGFHHRQFVLLCCLERSKLHSGIV-LKDFDEGNSSNSDQFHHEKLESSEDCEFCEIFREEFVYLSDMIRRYPGHESLWCYRRFL 353
BLAST of mRNA_Ecto-sp13_S_contig17991.5505.1 vs. uniprot
Match: UPI000C6D2F59 (protein prenyltransferase alpha subunit repeat-containing protein 1-like n=1 Tax=Centruroides sculpturatus TaxID=218467 RepID=UPI000C6D2F59) HSP 1 Score: 72.0 bits (175), Expect = 3.800e-10 Identity = 46/161 (28.57%), Postives = 68/161 (42.24%), Query Frame = 1
Query: 1 QVCQRVAELYPKNYYAWTQRSWVVLRAVGGARADAGAGQEGLPGEDTPAAAAAAELLEREIEFVDRWLTSHVSDHSALNHRKNVFSALAA-----MSPA---SDEMARLGLVDK-------------------ERSANSKLLRDYPGHESLWCYRRFVCQA 402
+VC R AE YP NYYAW+ R WV+ + + + E++ + W+ +H+SDHS ++R+ + + SP+ S E + DK E NS L+ YPGHE+LWC+RRFV A
Sbjct: 161 EVCSRAAERYPNNYYAWSHRIWVIQELIVDKK----------------------NIAIEELKNTESWVCNHISDHSGFHYRQFLITTCLKETGNHQSPSLSKSQESTIENIQDKGSDKDGLIVTNETWLLLRQELVLNSDLIISYPGHEALWCHRRFVIHA 299
BLAST of mRNA_Ecto-sp13_S_contig17991.5505.1 vs. uniprot
Match: A0A7S1B4N4_9STRA (Hypothetical protein n=2 Tax=Corethron hystrix TaxID=216773 RepID=A0A7S1B4N4_9STRA) HSP 1 Score: 71.6 bits (174), Expect = 7.250e-10 Identity = 45/128 (35.16%), Postives = 67/128 (52.34%), Query Frame = 1
Query: 4 VCQRVAELYPKNYYAWTQRSWVVLRAVGGARADAGAGQEGLPGEDTPAAAAAAELLEREIEFVDRWLTSHVSDHSALNHRKNVFSALAAMSPASDEMARLGLVDKERSANSKLLRDYPGHESLWCYRR 387
+C VA+ +PKNYYAWT R +++ + A A + + E T +A +L+ RE+ D WL HVSDHSA+++ V L + A + R + +R LL +P HE+LW YRR
Sbjct: 217 LCVSVADKFPKNYYAWTHRLYIMKSLIHWANASS------IHEERTERIRSATDLVMREVRATDPWLRRHVSDHSAVHYGAEVLGLLMEIGSAV-QATRAIVTALDRG--HILLVAHPEHEALWKYRR 335
BLAST of mRNA_Ecto-sp13_S_contig17991.5505.1 vs. uniprot
Match: A0A7S2K471_9STRA (Hypothetical protein n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2K471_9STRA) HSP 1 Score: 67.4 bits (163), Expect = 7.910e-9 Identity = 43/140 (30.71%), Postives = 65/140 (46.43%), Query Frame = 1
Query: 4 VCQRVAELYPKNYYAWTQRSWV--VLRAVGGARADAGAGQEGLPGEDTPAAAAAAELLEREIEFVDRWLTSHVSDHSALNHRKNVFSALAAMSPASDEMAR----------LGLVDKERSANSKLLRDYPGHESLWCYRR 387
+C +VAE +PKNYYAWT R +V VL+ D + + + L +E++FV+ W+ HVSDH A+++ + + M D A+ L +V S LL +P HE +W YRR
Sbjct: 58 ICAKVAESFPKNYYAWTHRVFVMKVLK-------DRWSSNNEEQSDSSSINCRLYMRLSKELDFVETWVKRHVSDHCAIHYGSEIMRIMVLMRRCKDSQAKDFDKTNIFEALNVVSSCLSWIKDLLAMFPCHEVIWRYRR 190
BLAST of mRNA_Ecto-sp13_S_contig17991.5505.1 vs. uniprot
Match: V9ECA2_PHYPR (Uncharacterized protein n=6 Tax=Phytophthora parasitica TaxID=4792 RepID=V9ECA2_PHYPR) HSP 1 Score: 67.4 bits (163), Expect = 1.460e-8 Identity = 33/83 (39.76%), Postives = 51/83 (61.45%), Query Frame = 1
Query: 163 ELLEREIEFVDRWLTSHVSDHSALNHRKNVFSALAAMSPASDEM-ARLGLVDKERSANSKLLRDYPGHESLWCYRRFVCQARL 408
+L+++E+E ++RW +HV+DHS NHR++ + L S E+ LV E SK++ YP HE+LWC+RR+V Q L
Sbjct: 202 DLVQKELEDMERWCRTHVTDHSGWNHRQHTLNELVKKHRDSGEVDVPQNLVLAEYKFVSKIVAQYPTHEALWCHRRYVIQYLL 284
BLAST of mRNA_Ecto-sp13_S_contig17991.5505.1 vs. uniprot
Match: A0A0W8CA22_PHYNI (Prenyltransferase alpha subunit repeat-containing protein 1 protein n=5 Tax=Phytophthora TaxID=4783 RepID=A0A0W8CA22_PHYNI) HSP 1 Score: 67.4 bits (163), Expect = 2.480e-8 Identity = 33/83 (39.76%), Postives = 51/83 (61.45%), Query Frame = 1
Query: 163 ELLEREIEFVDRWLTSHVSDHSALNHRKNVFSALAAMSPASDEM-ARLGLVDKERSANSKLLRDYPGHESLWCYRRFVCQARL 408
+L+++E+E ++RW +HV+DHS NHR++ + L S E+ LV E SK++ YP HE+LWC+RR+V Q L
Sbjct: 744 DLVQKELEDMERWCRTHVTDHSGWNHRQHTLNELVKKHRDSGEVDVPQNLVLAEYKFVSKIVAQYPTHEALWCHRRYVIQYLL 826 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig17991.5505.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig17991.5505.1 >prot_Ecto-sp13_S_contig17991.5505.1 ID=prot_Ecto-sp13_S_contig17991.5505.1|Name=mRNA_Ecto-sp13_S_contig17991.5505.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=405bp QVCQRVAELYPKNYYAWTQRSWVVLRAVGGARADAGAGQEGLPGEDTPAAback to top mRNA from alignment at Ecto-sp13_S_contig17991:526..3568+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig17991.5505.1 ID=mRNA_Ecto-sp13_S_contig17991.5505.1|Name=mRNA_Ecto-sp13_S_contig17991.5505.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=3043bp|location=Sequence derived from alignment at Ecto-sp13_S_contig17991:526..3568+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig17991:526..3568+ >mRNA_Ecto-sp13_S_contig17991.5505.1 ID=mRNA_Ecto-sp13_S_contig17991.5505.1|Name=mRNA_Ecto-sp13_S_contig17991.5505.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=1215bp|location=Sequence derived from alignment at Ecto-sp13_S_contig17991:526..3568+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top |