mRNA_Ecto-sp13_S_contig17984.5500.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview


Name	mRNA_Ecto-sp13_S_contig17984.5500.1
Unique Name	mRNA_Ecto-sp13_S_contig17984.5500.1
Type	mRNA
Organism	Ectocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)

Homology

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BLAST of mRNA_Ecto-sp13_S_contig17984.5500.1 vs. uniprot
Match: D7FKL4_ECTSI (Ankyrin repeat protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FKL4_ECTSI)

HSP 1 Score: 584 bits (1505), Expect = 1.770e-202
Identity = 363/382 (95.03%), Postives = 372/382 (97.38%), Query Frame = 1

Query:  214 MANECARGALRGEEERIFDLAAETCTPKQWAGLMQPFLEHAAGRGDEHLTRKLVEAGAEIRTAVHAAVRGGHCEITEFLLESGASASASDEEGLTPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXADINRRYGDREISALDIGAGEGHIDFIRTLIEHGADVDATNYGGVAALHHATANNKVEAMDVLLRAGANPRSMSESGHTVLHMAAITRTRTEAATLAVLLKYGADVNAQTVRGTSVLEYVATRAGREGIMEVVDLLLRWGADEAHVAGNGMRAADVIGMKVPEEDRIPEEVEGVRKLLANAPADRAWRRRRSLVLCRAQPDRVQLSSDGIARLEARVLGLVEEGIFRTIVRFI 1359
            MANECARGALRGEEERIFDLAAETCTPKQWAGLMQPFLEHAAGRG EHLTRKLVEAGAEI TAVHAAVRGGHC+ITEFLLESGASASASDEEGLTP XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXADINRRYGDREISALDIGAGEGH+DFIRTLIEHGADVDATNYGGVAALHHATANNKVEAMDVLLRAGAN RSMSESGHTVLHMAAITRTRTEAATLAVLLK+GADVNAQTV GTSVLEYVATRAG++GI+EVVDLLLRWGADE HVAGNGMRAAD IGMKVPEEDRIPEE EGVRKLLANAPADRAWRRR SLVLCRA+PD++QLSSD IARLEARVLGLVEEGIFRTIVRFI
Sbjct:    1 MANECARGALRGEEERIFDLAAETCTPKQWAGLMQPFLEHAAGRGHEHLTRKLVEAGAEIGTAVHAAVRGGHCDITEFLLESGASASASDEEGLTPLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXADINRRYGDREISALDIGAGEGHVDFIRTLIEHGADVDATNYGGVAALHHATANNKVEAMDVLLRAGANARSMSESGHTVLHMAAITRTRTEAATLAVLLKHGADVNAQTVGGTSVLEYVATRAGKQGIVEVVDLLLRWGADETHVAGNGMRAADAIGMKVPEEDRIPEEFEGVRKLLANAPADRAWRRRCSLVLCRARPDKMQLSSDRIARLEARVLGLVEEGIFRTIVRFI 382

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BLAST of mRNA_Ecto-sp13_S_contig17984.5500.1 vs. uniprot
Match: D7G137_ECTSI (Ankyrin repeat protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G137_ECTSI)

HSP 1 Score: 170 bits (431), Expect = 3.540e-43
Identity = 186/382 (48.69%), Postives = 229/382 (59.95%), Query Frame = 1

Query:  220 NECARGALRGEEERIFDLAAETCTPKQWAGLMQPFLEHAAGRGDEHLTRKLVEAGAEIR-TAVHAAVRGGHCEITEFLLESGASASASDEEGLTPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXADINRRYGDREISALDIGAGEGHIDFIRTLIEHGADVDATNYGGVAALHHATANNKVEAMDVLLRAGANPRSMSESGHTVLHMAAITRTRTEAATLAVLLKYGADVNAQTVRGTSVLEYVATRAGREGIMEVVDLLLRWGADEAHVAGNGMRAADVIGMK-VPEEDRIPEEVEGVRKLLANAPADRAWRRRRSLVLCRAQPDRVQLSSDGIARLEARVLGLVEEGIFRTIVRFI 1359
            N+ A+  L+GEEER+ DL  +T  P + +  +   LE A  RGDE L +KLV+AGA+I   A+H AVR GH  I E LLE+GAS    +++  TPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX  +  R  + ++S LD  A    ++ +R LI+HG +V+     G A LH A   N+  A+DVL+ AGA+ ++ + SG   L                                       A    R G ++VV LLLRWGADE  V   G  AAD IG +  P  +  P + E  R LL  APADRAWRRR  LVLC A PDR+QL  D +A L  RVLGL E G+FRTIV ++
Sbjct:   12 NKAAKETLKGEEERVLDLMLDTRCPHEMSEWLAAPLESAVARGDEGLAQKLVQAGAKIGGVALHEAVRRGHIAIAELLLENGASVHDDEDDYGTPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLTVRLNEFDMSFLDFAASSQDVEILRMLIDHGMEVNLAAAFGTA-LHWAAKANRANAIDVLVGAGADIQARNMSGSRPLXXXXXXXXXXXX--XXXXXXXXXXXXXXXXXXXXXXXXXAKVGQRRGSVQVVGLLLRWGADETIVCKQGKTAADRIGTRRFPSTE--PGDDERARSLLTRAPADRAWRRRGLLVLCHAYPDRLQLGGD-LAGLVDRVLGLEEVGVFRTIVLYL 387

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BLAST of mRNA_Ecto-sp13_S_contig17984.5500.1 vs. uniprot
Match: A0A6H5KXK5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KXK5_9PHAE)

HSP 1 Score: 145 bits (366), Expect = 3.240e-34
Identity = 178/406 (43.84%), Postives = 216/406 (53.20%), Query Frame = 1

Query:  262 IFDLAAETCTPKQWAGLMQPFLEHAAGRGDEHLTRKLVEAGAEIRTAVHAAVRGGHCEITEFLLESGASASASDEEGLTPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXADINRRYGDREISALDIGAGEGHIDFIRTLIEHGADVDATNYGGVAALHHATANNKVEAMDVLLRAGANPRSMSESGHTVLHMAAITRTRTEAATLAVLLKYGADVNAQTVRGTSVLEYV---ATRAGREGIMEVVDLLLRWGADEAHVAGNGMRAADVIGMKVPEEDRIPEEVEGVRKLLANAPADRAWRRRRSLVLCRAQPDRV-----------------------QLSSDGIAR--------------LEARVLGLVEEGIFRTIVRFI 1359
            + D   E  T +Q A L++  LEHAA +G++ L ++LV AGAEI  A+H AV GGH EI   LLES AS +A+D +G TP XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX     R    +  A    A EGH++ +R +IEHGADVDA +          TA                                                             S+L  +     +AGR+G  EVV+ LLR GADE      G +A D+IG  V EEDR+ E+VE VR+LLANAPADRAWRRR  L++CRAQPDRV                          + GIA               + ++V+ L EEGIFRTIV ++
Sbjct:    1 MVDFIFEILTSQQLAELLRALLEHAAAKGNKDLAQRLVRAGAEIGDALHRAVDGGHREIVSDLLESEASLAATDMDGRTPLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTLRSTQFKCPATHAAALEGHVEILRAIIEHGADVDAVD------AQQRTAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSNSLLTPLMKAGRQAGRQGAAEVVNSLLRAGADETIANVQGNKAVDMIGEDVEEEDRLTEDVERVRELLANAPADRAWRRRGYLIMCRAQPDRVPERRMTSGTHYTNVARRTRSRAKMARARGIAGESTVDESTGGNWAVVVSKVISLQEEGIFRTIVEYL 400

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BLAST of mRNA_Ecto-sp13_S_contig17984.5500.1 vs. uniprot
Match: D7G1U1_ECTSI (Ankyrin repeat protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G1U1_ECTSI)

HSP 1 Score: 140 bits (354), Expect = 1.090e-32
Identity = 172/381 (45.14%), Postives = 208/381 (54.59%), Query Frame = 1

Query:  220 NECARGALRGEEERIFDLAAETCTPKQWAGLMQPFLEHAAGRGDEHLTRKLVEAGAEIR-TAVHAAVRGGHCEITEFLLESGASASASDEEGLTPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXADINRRYGDREISALDIGAGEGHIDFIRTLIEHGADVDATNYGGVAALHHATANNKVEAMDVLLRAGANPRSMSESGHTVLHMAAITRTRTEAATLAVLLKYGADVNAQTVRGTSVLEYVATRAGREGIMEVVDLLLRWGADEAHVAGNGMRAADVIGMKVPEEDRIPEEVEGVRKLLANAPADRAWRRRRSLVLCRAQPDRVQLSSDGIARLEARVLGLVEEGIFRTIVRFI 1359
            N+ A+  ++GE +R+ DL  +T  P + +  +   LE A   G E L RKLV+AGA++   A+H  VR GH  + E LLE+GAS    +++  TPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX  +  R  + E+SALD  A   H++ +R LI+HG +V   N  G  AL                                                                        A    R G  +VVDLLLRWGADE  V+  G  AAD IG +       PE+ E  R LLA APADRAWRRR  LVLCRA PDR+QL  D +A L A V GL E G+FRTIV ++
Sbjct:   15 NKAAKETMKGEGQRVLDLMFDTRWPHEMSEWLAAPLESAVVSGHEGLARKLVQAGAKVGGVALHETVRRGHIAMAELLLENGASVHDDEDDYGTPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLTVRLTEFEVSALDFAALSDHVEIVRMLIDHGMEVHRANSDGRTALXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX--XXXXXXXXXXXXXXXXXXXXXXXXXAAVGQRHGSAQVVDLLLRWGADETIVSKQGETAADSIGTRRCHRTD-PEDDERARSLLARAPADRAWRRRGLLVLCRAHPDRLQLGGD-LAGLVAGVGGLEEVGVFRTIVLYL 391

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BLAST of mRNA_Ecto-sp13_S_contig17984.5500.1 vs. uniprot
Match: D7FYD0_ECTSI (Ankyrin repeat protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FYD0_ECTSI)

HSP 1 Score: 126 bits (317), Expect = 1.400e-27
Identity = 186/425 (43.76%), Postives = 223/425 (52.47%), Query Frame = 1

Query:  214 MANECARGALRGEEERIFDLAAETCTPKQWAGLMQPFLEHAAGRGDEHLTRKLVEAGAEIRTAVHAAVRGGHCEITEFLLESGASASASDEEGLTPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXADINRR--YGDREISALDIGAGEGHIDFIRTLIEHGADVDATNYGGVAALHHATANNKVEAMDVLLRAGANPRSMSESGHTVLHMAAITRTRTEAATLAVLLKYGADVNAQTVRGTSVLEYVATRAGREGIMEVVDLLLRWGADEAHVAGNGMRAADVIGMKVPEED-RIPEEVEGVRKLLANAPADRAWRRRRSLVLCRAQPDRVQL-SSDG----------------IARLEA-----------------------RVLGLVEEGIFRTIVRFI 1359
            MAN   R  LRG   R+ DL +   TP++WA  ++  LE A   GD  L   LV  GAE  TAV+ A+  G  E+   LL++GAS SA+D EG   XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX     R  Y     S                       V+A +   V ALH A A NKV+A+ VLL AGA+ +  S S  T LH+A+  +   E+A                          A+ AGR+G  E+VDLLLR GADE     NG + AD +G  +   D  +  EV  V +LLANAPADRAWRRR  LVLCRA   R +L   DG                +AR +A                       RV+ L EEGIFR++V F+
Sbjct:    1 MANT-RRKPLRGAALRVLDLVSAASTPEEWAAWLKVPLEIAVRTGDRDLASMLVRGGAEAGTAVNEAIACGDTEVMSLLLDNGASVSATDAEGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLREWYDGAHRSXXXXXXXXXXXXXXXXXXXXXXXVNAGDNLFVPALHLAVAFNKVKAVKVLLEAGADIQGHSFSRSTPLHLASFKQPSVESAVXXXXXXXXXXXXXXXXXXXX--XXAASYAGRQGSAELVDLLLRRGADETTPDRNGQQPADRVGHCMELGDVLLGHEVVLVHELLANAPADRAWRRRGLLVLCRAWLRRSRLRQEDGGDTRGGLSRRTRSRAKLARSDAVGAGCRRGTPEGGTGDEWRSASKRVVELEEEGIFRSVVGFL 422

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BLAST of mRNA_Ecto-sp13_S_contig17984.5500.1 vs. uniprot
Match: A0A6H5KNU3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KNU3_9PHAE)

HSP 1 Score: 122 bits (305), Expect = 1.030e-25
Identity = 82/199 (41.21%), Postives = 118/199 (59.30%), Query Frame = 1

Query:  667 INRRYGDREISALDIGAGEGHIDFIRTLIEHGADVDATNYGGVAALHHATANNKVEAMDVLLRAGANPRSMSESGHTVLHMAAITRTRTEAATLAVLLKYGADVNAQTVRGTSVLEYVATRAGREGIMEVVDLLLRWGADEAHVAGNGMRAADVIGMKVPEEDRIP---EEVEGVRKLLANAPADRAWRRRRSLVLCRA 1254
            ++ R  +R  S LD  A +G    +R +++HG DV+     G  +LH A  NN+V A+DVL+ AGA+     +   T   + A +    EAA    L K+GA++ A+ +RG + L   A +AGR+G+  +VD+LLR GADE  +  +G  AA+V+G  + E    P   +++E VR LL NAPADRAWRRR  LVLCRA
Sbjct:  148 VHYRIWNRSYSVLDFAAQKGDACVLRAILQHGVDVNRRT-DGYTSLHVAALNNRVAAIDVLVEAGAHVEVEDDDDCTPF-LDACSNHCHEAAL--ALFKHGANIEARDMRGETPLIIAARQAGRQGVTAIVDMLLRCGADETALNPDGRTAAEVVGHHI-EYAACPLNKQDLERVRDLLENAPADRAWRRRGLLVLCRA 341

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BLAST of mRNA_Ecto-sp13_S_contig17984.5500.1 vs. uniprot
Match: A0A6H5JHY9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JHY9_9PHAE)

HSP 1 Score: 122 bits (307), Expect = 3.190e-25
Identity = 80/166 (48.19%), Postives = 106/166 (63.86%), Query Frame = 1

Query:  757 HGADVDATNYGGVAALHHATANNKVEAMDVLLRAGANPRSMSESGHTVLHMAAITRTRTEAATLAVLLKYGADVNAQTVRGTSVLEYVATRAGREGIMEVVDLLLRWGADEAHVAGNGMRAADVIGMKVPEEDRIPEEVEGVRKLLANAPADRAWRRRRSLVLCRA 1254
            HG DV+A    G+ AL  A+A +K  A+DVL  AGAN  + + +G T LH+A  ++    AA +A LL++GA V  +     + L  VA +AG  G  E+VDLLLR GADE  V+ NG  AAD++ +K  E D + E+V+ VRKLLA APADRAWRRR  L+L RA
Sbjct:  546 HGGDVNAKVNNGITALRVASAFDKAPAIDVLTEAGANIEAQA-NGSTPLHVA--SQEGRLAAGIA-LLRHGASVGKKNAAAQTPLHLVAAKAGSPGTAEMVDLLLRRGADETAVSENGHTAADMVVLKTEESDSLAEDVDRVRKLLARAPADRAWRRRGFLILSRA 707

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BLAST of mRNA_Ecto-sp13_S_contig17984.5500.1 vs. uniprot
Match: D8LQN0_ECTSI (Ankyrin repeat protein n=2 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LQN0_ECTSI)

HSP 1 Score: 116 bits (291), Expect = 8.700e-24
Identity = 96/271 (35.42%), Postives = 137/271 (50.55%), Query Frame = 1

Query:  697 SALDIGAGEGHIDFIRTLIE-HGADVDATNYGGVAALHHA-----TANNKVEAMDVLLRAGA--NPRSMSESGHTVLHMAAITRTRTEAATLAVLLKYGADVNAQTVRGTSVLEYVATRAGREGIMEVVDLLLRWGADEAHVAGNGMRAADVIGMKVPEEDRIPEEVEG----VRKLLANAPADRAWRRRRSLVLCRAQPDRVQL-----SSDGIARLEA---------------------------------RVLGLVEEGIFRTIVRFI 1359
            S L+I AG GH D ++ L++   ++VD  N  G AALH+      T  +K +A+ VLL AGA  N +  ++S  T LH+A + R  T   T+  LL+ GA++NA+T    + L    TR        VV+LLLRWGADE     +G   ADV+G+ + + D   EE E     + ++LA APADR+WRRR  LVL R+ P RV +     SS  I+R+                                   R++GL  EG+FR +V F+
Sbjct:  247 SPLEIAAGRGHADVLKALLDKRSSEVDTANDLGWAALHYVASFDETVRDKGDAVRVLLGAGADVNVKGTNDSCATPLHLA-VNRWMTSTGTICALLEGGANINARTAGDDTPLHIACTRLRGS----VVELLLRWGADEKLPNNDGDTPADVVGV-LEQNDLDDEEREADNQRIHRMLARAPADRSWRRRGWLVLSRSCPTRVHIANGSSSSSSISRINGNSAKVARVSGQGSSRDDEETEDQMMVDLRDLVGRLVGLEAEGLFRLVVGFL 511

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BLAST of mRNA_Ecto-sp13_S_contig17984.5500.1 vs. uniprot
Match: D8LL12_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LL12_ECTSI)

HSP 1 Score: 104 bits (259), Expect = 1.880e-20
Identity = 121/205 (59.02%), Postives = 145/205 (70.73%), Query Frame = 1

Query:  172 RGIWSV-TASQALLRMANECARGALRGEEERIFDLAAETCTPKQWAGLMQPFLEHAAGRGDEHLTRKLVEAGAEIRTAVHAAVRGGHCEITEFLLESGASASASDEEGLTPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXADINRRYGDREISALDIGAGEGHIDFIRTLIEHGADVDATN 783
            RG +S  T SQ  L  ANE  R AL+G E   FDL +E  T   WA ++Q  LE AA +G+  LT+KL+ AGA++ +A+HAAVR GH E+   LLE GA  S  D  G TP    XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAD+N R G  + + L + A +GH+D +R L++HGADV A +
Sbjct:    4 RGFFSRHTCSQNAL--ANEQGRRALKGAEGETFDLFSEVLTTHGWAEMLQFPLECAAAQGNVALTQKLLRAGADMGSALHAAVRYGHAEVVTNLLEHGACVSIKDTRGSTPLQVAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXADVNVRCGLLKRTVLSLAAEKGHVDILRALVKHGADVTAVD 206

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BLAST of mRNA_Ecto-sp13_S_contig17984.5500.1 vs. uniprot
Match: D7FSI6_ECTSI (Similar to ankyrin 2,3/unc44 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FSI6_ECTSI)

HSP 1 Score: 103 bits (256), Expect = 6.720e-20
Identity = 79/209 (37.80%), Postives = 105/209 (50.24%), Query Frame = 1

Query:  703 LDIGAGEGHIDFIRTLIEHGADVD--ATNYGGVAALHHATANNKVEAMDVLLRAGANPRSMSESGHTVLH---MAAITRTRTEAATLAVLLKYGADVNAQTVRGTSVLEYVATRAGREGIMEVVDLLLRWGADEAHVAGNGMRAADVIGMKVPEEDRIPEEVEGVRKLLANAPADRAWRRRRSLVLCRA--QPDRVQLSSDGIARLEAR 1308
            +++    GH+  I+  +EHG D    A    G  ALH A  +N+ EA++VLL AGA+    S  G        +AA      EA  L VLL+ GAD N     G+  L ++A      G+MEVVDLLLRWGA E  V  +G   A+V            EE  G   LLA APADRAWRRR  +V+ RA  + +R+     G+ +   R
Sbjct:  171 INVATQLGHVGVIKAFLEHGVDASSQACPASGWTALHQAALDNQAEAVEVLLEAGADADVESLPGSPCYDTPLLAAAESMSNEA--LRVLLRNGADPNKPDDNGSMPL-HLAAHEQTPGVMEVVDLLLRWGASETAVNKHGNTPAEVFQRLAIHRPDATEERAGALVLLARAPADRAWRRRGWVVMLRARSETERIAAQRRGLFKFRRR 376

The following BLAST results are available for this feature:

BLAST of mRNA_Ecto-sp13_S_contig17984.5500.1 vs. uniprot

BLAST of mRNA_Ecto-sp13_S_contig17984.5500.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
D7FKL4_ECTSI	1.770e-202	95.03	Ankyrin repeat protein n=2 Tax=Ectocarpus TaxID=28...	[more]
D7G137_ECTSI	3.540e-43	48.69	Ankyrin repeat protein n=1 Tax=Ectocarpus siliculo...	[more]
A0A6H5KXK5_9PHAE	3.240e-34	43.84	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
D7G1U1_ECTSI	1.090e-32	45.14	Ankyrin repeat protein n=1 Tax=Ectocarpus siliculo...	[more]
D7FYD0_ECTSI	1.400e-27	43.76	Ankyrin repeat protein n=2 Tax=Ectocarpus TaxID=28...	[more]
A0A6H5KNU3_9PHAE	1.030e-25	41.21	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
A0A6H5JHY9_9PHAE	3.190e-25	48.19	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
D8LQN0_ECTSI	8.700e-24	35.42	Ankyrin repeat protein n=2 Tax=Ectocarpus siliculo...	[more]
D8LL12_ECTSI	1.880e-20	59.02	Uncharacterized protein n=1 Tax=Ectocarpus silicul...	[more]
D7FSI6_ECTSI	6.720e-20	37.80	Similar to ankyrin 2,3/unc44 n=1 Tax=Ectocarpus si...	[more]

Pages

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
Ecto-sp13_S_contig17984	contig	Ecto-sp13_S_contig17984:791..2931 +

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Diamond blastx: OGS1.0 vs UniRef90	2022-09-19
Ectocarpus species13 EcNAP12_S_4_19m OGS1.0	2022-07-08

Properties


Property Name	Value
Taxonomic scope	Eukaryota
Stop	1
Start	1
Seed ortholog score	587.0
Seed ortholog evalue	6.2e-165
Seed eggNOG ortholog	2880.D7FKL4
Model size	2141
KEGG ko	ko:K21440
Hectar predicted targeting category	other localisation
GOs	GO:0001508,GO:0002027,GO:0002262,GO:0002376,GO:0002520,GO:0003008,GO:0003012,GO:0003013,GO:0003015,GO:0003205,GO:0003230,GO:0003279,GO:0003283,GO:0003674,GO:0005198,GO:0005200,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005737,GO:0005783,GO:0005829,GO:0005856,GO:0005886,GO:0005911,GO:0005938,GO:0006725,GO:0006778,GO:0006779,GO:0006807,GO:0006810,GO:0006811,GO:0006812,GO:0006816,GO:0006873,GO:0006874,GO:0006875,GO:0006887,GO:0006888,GO:0006928,GO:0006936,GO:0006937,GO:0006941,GO:0006942,GO:0006996,GO:0007009,GO:0007010,GO:0007154,GO:0007163,GO:0007165,GO:0007267,GO:0007275,GO:0007507,GO:0008015,GO:0008016,GO:0008092,GO:0008093,GO:0008104,GO:0008150,GO:0008152,GO:0009058,GO:0009893,GO:0009987,GO:0010256,GO:0010468,GO:0010522,GO:0010604,GO:0010628,GO:0010638,GO:0010646,GO:0010880,GO:0010881,GO:0010882,GO:0010959,GO:0012505,GO:0014704,GO:0014731,GO:0015672,GO:0016020,GO:0016043,GO:0016192,GO:0016323,GO:0016528,GO:0016529,GO:0018130,GO:0019222,GO:0019438,GO:0019722,GO:0019725,GO:0019899,GO:0019900,GO:0019901,GO:0019932,GO:0022898,GO:0023051,GO:0023052,GO:0030001,GO:0030003,GO:0030011,GO:0030016,GO:0030017,GO:0030018,GO:0030029,GO:0030048,GO:0030054,GO:0030097,GO:0030099,GO:0030154,GO:0030218,GO:0030315,GO:0030424,GO:0030507,GO:0030673,GO:0030674,GO:0030863,GO:0031252,GO:0031253,GO:0031256,GO:0031430,GO:0031647,GO:0031672,GO:0031674,GO:0032409,GO:0032411,GO:0032412,GO:0032414,GO:0032501,GO:0032502,GO:0032589,GO:0032879,GO:0032940,GO:0032970,GO:0033013,GO:0033014,GO:0033036,GO:0033043,GO:0033267,GO:0033292,GO:0033365,GO:0034101,GO:0034394,GO:0034613,GO:0034641,GO:0034762,GO:0034764,GO:0034765,GO:0034767,GO:0035088,GO:0035090,GO:0035556,GO:0035637,GO:0036309,GO:0036371,GO:0042383,GO:0042391,GO:0042592,GO:0042692,GO:0042995,GO:0043005,GO:0043034,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043266,GO:0043268,GO:0043269,GO:0043270,GO:0043292,GO:0044057,GO:0044093,GO:0044237,GO:0044249,GO:0044271,GO:0044291,GO:0044304,GO:0044325,GO:0044422,GO:0044424,GO:0044425,GO:0044444,GO:0044448,GO:0044449,GO:0044456,GO:0044459,GO:0044463,GO:0044464,GO:0045197,GO:0045199,GO:0045202,GO:0045211,GO:0046483,GO:0046903,GO:0046907,GO:0048193,GO:0048468,GO:0048513,GO:0048518,GO:0048522,GO:0048534,GO:0048731,GO:0048821,GO:0048856,GO:0048869,GO:0048872,GO:0048878,GO:0050789,GO:0050794,GO:0050801,GO:0050821,GO:0050896,GO:0051049,GO:0051050,GO:0051117,GO:0051128,GO:0051130,GO:0051179,GO:0051186,GO:0051188,GO:0051234,GO:0051239,GO:0051270,GO:0051279,GO:0051282,GO:0051641,GO:0051649,GO:0051716,GO:0051899,GO:0051924,GO:0051928,GO:0055001,GO:0055065,GO:0055072,GO:0055074,GO:0055076,GO:0055080,GO:0055082,GO:0055117,GO:0060047,GO:0060048,GO:0060090,GO:0060255,GO:0060306,GO:0060307,GO:0060341,GO:0061024,GO:0061061,GO:0061245,GO:0061337,GO:0061515,GO:0065007,GO:0065008,GO:0065009,GO:0070252,GO:0070296,GO:0070727,GO:0070838,GO:0070972,GO:0071704,GO:0071840,GO:0071944,GO:0072359,GO:0072503,GO:0072507,GO:0072511,GO:0072657,GO:0072659,GO:0086001,GO:0086002,GO:0086003,GO:0086004,GO:0086005,GO:0086010,GO:0086012,GO:0086014,GO:0086015,GO:0086018,GO:0086019,GO:0086026,GO:0086046,GO:0086065,GO:0086066,GO:0086070,GO:0086091,GO:0090257,GO:0097060,GO:0097458,GO:0098590,GO:0098771,GO:0098794,GO:0098900,GO:0098901,GO:0098907,GO:0098910,GO:0099080,GO:0099081,GO:0099512,GO:0099568,GO:0099623,GO:0120025,GO:0120038,GO:1901016,GO:1901018,GO:1901019,GO:1901021,GO:1901360,GO:1901362,GO:1901379,GO:1901381,GO:1901564,GO:1901566,GO:1901576,GO:1903115,GO:1903169,GO:1903522,GO:1903779,GO:1904062,GO:1904064,GO:1904427,GO:1990778,GO:2001257,GO:2001259
Exons	1
EggNOG free text desc.	response to abiotic stimulus
EggNOG OGs	COG0666@1,KOG4177@2759
Ec32 ortholog description	Ankyrin repeat-containing domain
Ec32 ortholog	Ec-09_000650.1
Cds size	1149
COG Functional cat.	G
Best tax level	Eukaryota
Best eggNOG OG	NA\|NA\|NA
BRITE	ko00000,ko04131

Relationships

The following UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
1681462929.8107946-UTR-Ecto-sp13_S_contig17984:790..1003	1681462929.8107946-UTR-Ecto-sp13_S_contig17984:790..1003	Ectocarpus species13 EcNAP12_S_4_19m	UTR	Ecto-sp13_S_contig17984 791..1003 +
1681462929.837481-UTR-Ecto-sp13_S_contig17984:2152..2931	1681462929.837481-UTR-Ecto-sp13_S_contig17984:2152..2931	Ectocarpus species13 EcNAP12_S_4_19m	UTR	Ecto-sp13_S_contig17984 2153..2931 +

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
1681462929.8268645-CDS-Ecto-sp13_S_contig17984:1003..2152	1681462929.8268645-CDS-Ecto-sp13_S_contig17984:1003..2152	Ectocarpus species13 EcNAP12_S_4_19m	CDS	Ecto-sp13_S_contig17984 1004..2152 +

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type	Position
mRNA_Ecto-sp13_S_contig17984.5500.1	prot_Ecto-sp13_S_contig17984.5500.1	Ectocarpus species13 EcNAP12_S_4_19m	polypeptide	Ecto-sp13_S_contig17984 1004..2152 +

Sequences

The following sequences are available for this feature:

protein sequence
mRNA from alignment at Ecto-sp13_S_contig17984:791..2931+
coding sequence from alignment at Ecto-sp13_S_contig17984:791..2931+

protein sequence of mRNA_Ecto-sp13_S_contig17984.5500.1

>prot_Ecto-sp13_S_contig17984.5500.1 ID=prot_Ecto-sp13_S_contig17984.5500.1|Name=mRNA_Ecto-sp13_S_contig17984.5500.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=383bp
MANECARGALRGEEERIFDLAAETCTPKQWAGLMQPFLEHAAGRGDEHLT
RKLVEAGAEIRTAVHAAVRGGHCEITEFLLESGASASASDEEGLTPLHLA
AQADQGEIARLLLLRGVDQDSSSYEGRTPLNCAACLGHASVAEVLLSAGA
DINRRYGDREISALDIGAGEGHIDFIRTLIEHGADVDATNYGGVAALHHA
TANNKVEAMDVLLRAGANPRSMSESGHTVLHMAAITRTRTEAATLAVLLK
YGADVNAQTVRGTSVLEYVATRAGREGIMEVVDLLLRWGADEAHVAGNGM
RAADVIGMKVPEEDRIPEEVEGVRKLLANAPADRAWRRRRSLVLCRAQPD
RVQLSSDGIARLEARVLGLVEEGIFRTIVRFI*

mRNA from alignment at Ecto-sp13_S_contig17984:791..2931+

Legend: UTRpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

>mRNA_Ecto-sp13_S_contig17984.5500.1 ID=mRNA_Ecto-sp13_S_contig17984.5500.1|Name=mRNA_Ecto-sp13_S_contig17984.5500.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=2141bp|location=Sequence derived from alignment at Ecto-sp13_S_contig17984:791..2931+ (Ectocarpus species13 EcNAP12_S_4_19m)
CCCTCCCTCATCAACGTTCCCGTGGCCACAGTAACCATTTCTTCTCTTAA
GCGCAGGGAGTAGCTCCTGTCTGCACGTCGGACACGTGGAGCATCTCCAA
TCGGCATTTTCTACTCACGTGAGCCGTGAGTCGGACTCCACTGCTCTACA
CTGCGTACATCACGTAGATAGAGAGGGATTTGGAGCGTGACCGCCAGCCA
AGCTCTCCTCAGGATGGCCAACGAATGCGCCCGAGGGGCACTCCGAGGGG
AAGAGGAGCGTATTTTCGACCTTGCTGCCGAGACGTGCACACCCAAGCAG
TGGGCCGGGTTGATGCAGCCTTTCCTCGAGCATGCCGCGGGTCGGGGAGA
TGAGCATCTGACCAGAAAGCTCGTGGAGGCAGGGGCGGAGATCAGGACTG
CCGTGCACGCGGCTGTTCGAGGAGGGCATTGTGAGATAACGGAGTTTCTG
CTGGAGAGTGGGGCGTCTGCGAGCGCCAGCGATGAAGAGGGCCTCACCCC
TCTCCACCTCGCCGCTCAAGCAGACCAAGGGGAGATCGCACGGTTGTTGC
TGCTGCGGGGGGTTGACCAAGACTCCTCGAGCTACGAAGGCCGCACGCCG
CTAAACTGCGCGGCATGTCTTGGGCATGCCAGTGTGGCGGAGGTTCTCTT
GTCTGCCGGTGCCGATATCAACCGACGCTACGGTGATCGCGAGATCTCGG
CACTCGATATCGGGGCTGGCGAAGGCCATATCGACTTCATCAGGACCTTG
ATCGAACATGGAGCGGACGTCGATGCCACTAATTACGGCGGCGTGGCGGC
CCTCCATCACGCCACTGCCAACAACAAGGTGGAGGCGATGGACGTGCTCT
TGCGAGCTGGAGCCAACCCCCGATCGATGTCTGAGAGTGGACATACCGTG
TTGCATATGGCGGCGATCACGCGGACCCGCACCGAAGCCGCTACCCTTGC
CGTCCTCCTAAAGTACGGTGCAGATGTCAACGCCCAGACGGTTCGGGGAA
CTTCGGTGTTGGAGTACGTTGCGACCAGGGCTGGCAGAGAGGGCATCATG
GAGGTAGTCGACCTCCTGCTGAGGTGGGGCGCAGACGAGGCACACGTTGC
CGGAAACGGCATGCGAGCCGCTGATGTGATTGGCATGAAGGTGCCAGAGG
AGGACCGCATACCCGAGGAAGTCGAGGGCGTGCGCAAGCTCTTGGCGAAC
GCTCCCGCGGACAGGGCATGGCGACGCCGTCGCTCGCTGGTGTTGTGCCG
CGCTCAACCCGACAGGGTGCAGCTGAGTAGCGACGGGATAGCAAGGTTGG
AGGCGAGGGTATTGGGGTTAGTAGAAGAGGGCATTTTTCGTACGATCGTG
AGGTTCATTTGAGAGTTGACATAGGTACGGTCACCTGCTGAAGGCGCCCG
TAAGCGCACGGCTTCCATTTAAAGCACAAAACACAGATCGCGCGCGTAGT
TATCGTGGAACCCGGCATTCTATGATTATTTTTTGATAGAATGTTGGAGC
ATGCCTTTGGTCCACGTCATTGATCTCGATGTATCTACTCCTCCTGGTTC
CTTCGTGTAGAGATGAGCAGTAACTGCGAAACTCGTAGCTCGTTTCACAT
CTGTCCTGCCACCCGTACAGGCCTACCGCTTCATGAGACCTACTTATTTT
CTGCGGGTGGTGCTTTTGCTTGCAGGTTGGCGTCCTAAGGAACTTTCATG
GTTAAGCGTAGGAATTGCCAACGTAAATCATGCATCCAGTCACGGGGTTT
CTTATATCCCTTACCATGATGGGCACAAGTATATGTTGCCTGTTTTTCTC
AAACCCTAGGCATGAGTCATCAACTCTTGTCACGAGAGGTCTCGGTACAT
GGAAAGTCTTCCCCACTCGTGTAATGAATCTGGGCAAAGCAGGGATTTGC
CCCACCCATCGGTTTTTATCGGCTAGCTGTTCATAGGTTTCCGGCAGAGA
GCGTGCGGCAGGCAAGCGCGTGGATAGTCTTGCGACCACTGCTGTGCCAT
ACTTGTTGAAAATCGACGTATGCATGTGAACACCAACTTGTTGCTTGAGT
CCTAGGACGCTCGCGCAAGCTACTGCAGTGGACCGTGCGGACGTGGTGCC
TTTTCGAAGCCCACATCATACCGATTTCAGAATGACCCGGT

Coding sequence (CDS) from alignment at Ecto-sp13_S_contig17984:791..2931+

>mRNA_Ecto-sp13_S_contig17984.5500.1 ID=mRNA_Ecto-sp13_S_contig17984.5500.1|Name=mRNA_Ecto-sp13_S_contig17984.5500.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=1149bp|location=Sequence derived from alignment at Ecto-sp13_S_contig17984:791..2931+ (Ectocarpus species13 EcNAP12_S_4_19m)
ATGGCCAACGAATGCGCCCGAGGGGCACTCCGAGGGGAAGAGGAGCGTAT
TTTCGACCTTGCTGCCGAGACGTGCACACCCAAGCAGTGGGCCGGGTTGA
TGCAGCCTTTCCTCGAGCATGCCGCGGGTCGGGGAGATGAGCATCTGACC
AGAAAGCTCGTGGAGGCAGGGGCGGAGATCAGGACTGCCGTGCACGCGGC
TGTTCGAGGAGGGCATTGTGAGATAACGGAGTTTCTGCTGGAGAGTGGGG
CGTCTGCGAGCGCCAGCGATGAAGAGGGCCTCACCCCTCTCCACCTCGCC
GCTCAAGCAGACCAAGGGGAGATCGCACGGTTGTTGCTGCTGCGGGGGGT
TGACCAAGACTCCTCGAGCTACGAAGGCCGCACGCCGCTAAACTGCGCGG
CATGTCTTGGGCATGCCAGTGTGGCGGAGGTTCTCTTGTCTGCCGGTGCC
GATATCAACCGACGCTACGGTGATCGCGAGATCTCGGCACTCGATATCGG
GGCTGGCGAAGGCCATATCGACTTCATCAGGACCTTGATCGAACATGGAG
CGGACGTCGATGCCACTAATTACGGCGGCGTGGCGGCCCTCCATCACGCC
ACTGCCAACAACAAGGTGGAGGCGATGGACGTGCTCTTGCGAGCTGGAGC
CAACCCCCGATCGATGTCTGAGAGTGGACATACCGTGTTGCATATGGCGG
CGATCACGCGGACCCGCACCGAAGCCGCTACCCTTGCCGTCCTCCTAAAG
TACGGTGCAGATGTCAACGCCCAGACGGTTCGGGGAACTTCGGTGTTGGA
GTACGTTGCGACCAGGGCTGGCAGAGAGGGCATCATGGAGGTAGTCGACC
TCCTGCTGAGGTGGGGCGCAGACGAGGCACACGTTGCCGGAAACGGCATG
CGAGCCGCTGATGTGATTGGCATGAAGGTGCCAGAGGAGGACCGCATACC
CGAGGAAGTCGAGGGCGTGCGCAAGCTCTTGGCGAACGCTCCCGCGGACA
GGGCATGGCGACGCCGTCGCTCGCTGGTGTTGTGCCGCGCTCAACCCGAC
AGGGTGCAGCTGAGTAGCGACGGGATAGCAAGGTTGGAGGCGAGGGTATT
GGGGTTAGTAGAAGAGGGCATTTTTCGTACGATCGTGAGGTTCATTTGA