prot_Ecto-sp13_S_contig17970.5491.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig17970.5491.1
Unique Nameprot_Ecto-sp13_S_contig17970.5491.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length158
Homology
BLAST of mRNA_Ecto-sp13_S_contig17970.5491.1 vs. uniprot
Match: D7G0U4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G0U4_ECTSI)

HSP 1 Score: 293 bits (751), Expect = 1.980e-95
Identity = 142/156 (91.03%), Postives = 144/156 (92.31%), Query Frame = 0
Query:    4 GHQDECCIDTLPREPPEEGGDVNDHGSPALDLGNHTANGG-RGVCFRHSFQKFLEPPQWESLGSPDAVYFGSGLHLLHMAIMEAERAQGWLTYERDLENAVETYRAAGGAGFRLVFTTSHTIQDSVYQGMFREMVDAYRDGDMEVISKCEGQVRGG 158
            GHQDECCIDTLPREP EEGGD NDHG+PALDLGNHTANGG RGVCFRHSFQKFLEPPQW SLGSPDAVYFG GLHLL M  ME ERAQ WLTYERDLENAVETYRAAGGAGFRLVFTTSHTIQDSVYQG+FREMVDAYRDGDM VISKCEGQVR G
Sbjct:  265 GHQDECCIDTLPREPAEEGGDANDHGTPALDLGNHTANGGGRGVCFRHSFQKFLEPPQWASLGSPDAVYFGRGLHLLPMDNMEGERAQAWLTYERDLENAVETYRAAGGAGFRLVFTTSHTIQDSVYQGLFREMVDAYRDGDMGVISKCEGQVRRG 420          
BLAST of mRNA_Ecto-sp13_S_contig17970.5491.1 vs. uniprot
Match: A0A6H5JXH8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JXH8_9PHAE)

HSP 1 Score: 262 bits (669), Expect = 2.120e-84
Identity = 130/177 (73.45%), Postives = 138/177 (77.97%), Query Frame = 0
Query:    4 GHQDECCIDTLPREPPEEGGDVNDHGSPALDLGNHTANGGRGVCFRHSFQKFLEPPQWESLGSPDAVYFGSGLHLLHMAIMEAERAQGWLTYERDLENAVETYRAAGGAGFRLVFTTSHTIQ-------------------------DSVYQGMFREMVDAYRDGDMEVISKCEGQV 155
            GHQDECCIDTLPREP EEG D NDHG+PALDL NHT NGGRGVCFR SFQKFLEPP+WESLGSPDAVYFGSGLHLLHM +MEAERAQGWLTYERDLE+AVETYRAAGGAGFR     S TI                          DSVYQG+FREMVDAYRDGD+EVISKCEG++
Sbjct:  187 GHQDECCIDTLPREPAEEGEDANDHGTPALDLHNHTVNGGRGVCFRRSFQKFLEPPEWESLGSPDAVYFGSGLHLLHMHVMEAERAQGWLTYERDLESAVETYRAAGGAGFRGQLQESLTIHAHFFSRMHAVSPRSTSVWVATGGSVDSVYQGLFREMVDAYRDGDVEVISKCEGKM 363          
BLAST of mRNA_Ecto-sp13_S_contig17970.5491.1 vs. uniprot
Match: D7FJP0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FJP0_ECTSI)

HSP 1 Score: 102 bits (253), Expect = 7.170e-23
Identity = 61/155 (39.35%), Postives = 82/155 (52.90%), Query Frame = 0
Query:    9 CCIDTLPREPPEEGGDVNDHGSPALDLGNHTANGGRGVCFRHSFQKFLEPPQWESLGSPDAVYFGSGLHLLHMAI-------MEAERAQGWLTYERDLENAVETYRAAGGAGFRLVFTTSHTIQDSVYQGMFREMVDAYRDG--DMEVISKCEGQ 154
            CC+DTLP+E   EGG                  GGRG+CF     +FL+P +  +  S DA YFGSGLHLLHM         ME  R Q WL YE  LE  V+  R   G   R+VF T+H I D  +QG ++++  AYR+G  +  + ++C+ Q
Sbjct:   38 CCMDTLPKEDEGEGG------------------GGRGLCFEFDQFRFLDPKR-AARTSVDAYYFGSGLHLLHMYPHWPEMYPMEPLRVQSWLNYESLLEGVVQAVRYKSGPNVRVVFMTNHAIADERFQGEYKDIRAAYREGPGNTTIRAECQDQ 173          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig17970.5491.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
D7G0U4_ECTSI1.980e-9591.03Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JXH8_9PHAE2.120e-8473.45Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FJP0_ECTSI7.170e-2339.35Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig17970contigEcto-sp13_S_contig17970:71..2260 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig17970.5491.1mRNA_Ecto-sp13_S_contig17970.5491.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig17970 71..2260 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig17970.5491.1 ID=prot_Ecto-sp13_S_contig17970.5491.1|Name=mRNA_Ecto-sp13_S_contig17970.5491.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=158bp
MRQGHQDECCIDTLPREPPEEGGDVNDHGSPALDLGNHTANGGRGVCFRH
SFQKFLEPPQWESLGSPDAVYFGSGLHLLHMAIMEAERAQGWLTYERDLE
NAVETYRAAGGAGFRLVFTTSHTIQDSVYQGMFREMVDAYRDGDMEVISK
CEGQVRGG
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