prot_Ecto-sp13_S_contig17960.5488.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig17960.5488.1
Unique Nameprot_Ecto-sp13_S_contig17960.5488.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length246
Homology
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BLAST of mRNA_Ecto-sp13_S_contig17960.5488.1 vs. uniprot
Match: A0A7S3W4E8_EMIHU (Hypothetical protein (Fragment) n=1 Tax=Emiliania huxleyi TaxID=2903 RepID=A0A7S3W4E8_EMIHU)

HSP 1 Score: 52.0 bits (123), Expect = 5.580e-5
Identity = 37/103 (35.92%), Postives = 57/103 (55.34%), Query Frame = 0 
Query:   39 EVERISAERDKLMDIGNSLRAELNRALSNSFEKHGDRNSATDAPVAAPEVEERTAERVKEAVSRAQRDTRRKYRARVSEVEAAFAQLAGDNRRLKARLAQLTT 141
            +V R++ ER+KLM+I N LRA+LNRA+++             +P A+ +  E  AER       A R+   +Y A++ E+E A  +L   NR LKA L + T+
Sbjct:    3 DVARLAEEREKLMEISNMLRADLNRAMADGA-----------SPAASRDAAEAAAER-------ATREVGAQYEAKLGEIEGAMRELISQNRALKAELRRWTS 87
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig17960.5488.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A7S3W4E8_EMIHU5.580e-535.92Hypothetical protein (Fragment) n=1 Tax=Emiliania ... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 19..53

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig17960contigEcto-sp13_S_contig17960:969..3065 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig17960.5488.1mRNA_Ecto-sp13_S_contig17960.5488.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig17960 967..3065 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig17960.5488.1 ID=prot_Ecto-sp13_S_contig17960.5488.1|Name=mRNA_Ecto-sp13_S_contig17960.5488.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=246bp
REELSELRGRVEHAEGPAVMELEEEVSRLQKRCDGLREEVERISAERDKL
MDIGNSLRAELNRALSNSFEKHGDRNSATDAPVAAPEVEERTAERVKEAV
SRAQRDTRRKYRARVSEVEAAFAQLAGDNRRLKARLAQLTTAGGSGSGGS
GGESPPRRRYSGDEYGGERRQAGRRRSRPGREEPSRTKVSLPASSSAVSY
PYSSTPAAAGLAVSGSTAAGRGGAARREGRNDMGTTAGGRQRTTAG
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