prot_Ecto-sp13_S_contig1796.5487.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig1796.5487.1
Unique Nameprot_Ecto-sp13_S_contig1796.5487.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length644
Homology
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BLAST of mRNA_Ecto-sp13_S_contig1796.5487.1 vs. uniprot
Match: D8LDM3_ECTSI (EsV-1-7 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LDM3_ECTSI)

HSP 1 Score: 334 bits (856), Expect = 6.710e-107
Identity = 247/284 (86.97%), Postives = 253/284 (89.08%), Query Frame = 0 
Query:  361 TVVEFKMRGCIHPGCTKRSSFGARDAKNKKPEYCTVHKKEGMVNVYTSAKXXXXXXXXXXXXXXXAGSGVKVVCPEHAADDMVPIGTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDHPWGXXXXXXXXXXXXXXXXXXXXXVGGAMASQNGSVSTRGFSSEGTQDKDRQECGVPESSFGPCGTSEKLTSRSPWPAQAEMSPERKGEEIETQASRPTIPLPTGVQDFGVEGSCSSVGTGPLLESILGADPPRIKSEALALHAEERPEYEGGS 644
            TVVEFKMRGCIHPGCTKR SFGARDAKN KPEYCTVHKKEGMVNVYTS KXXXXXXXXXXXXXXXAGSGVKVVC EHAAD+MVPIGT TXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX         D+PWGXXXXXXXXXXXXXXXXXXXXXVGGAMASQNGSVSTR FSSE TQDKD QECG PESS GPCGT+EKLT RSPWPAQA+MSP R GEEI+TQASRPTIP+PTG    GVEGSCSSVGTGPLLESIL ADPP IKSEAL  HAEERPEYEG S
Sbjct:    3 TVVEFKMRGCIHPGCTKRPSFGARDAKNNKPEYCTVHKKEGMVNVYTSTKXXXXXXXXXXXXXXXAGSGVKVVCAEHAADNMVPIGTVTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTVNVVSKRCDYPWGXXXXXXXXXXXXXXXXXXXXXVGGAMASQNGSVSTRRFSSEDTQDKDHQECGGPESSLGPCGTNEKLTFRSPWPAQADMSPGRSGEEIKTQASRPTIPVPTGAPALGVEGSCSSVGTGPLLESILVADPPTIKSEALGPHAEERPEYEGQS 286
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BLAST of mRNA_Ecto-sp13_S_contig1796.5487.1 vs. uniprot
Match: A0A6H5KWV5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KWV5_9PHAE)

HSP 1 Score: 58.9 bits (141), Expect = 4.690e-6
Identity = 23/39 (58.97%), Postives = 31/39 (79.49%), Query Frame = 0 
Query:   99 RKCAYPGCLKTPSYGNEGSKKAQFCSPHSRPGMLNIVTK 137
            R+C   GC KT +YGNEGSKKA+FC+ HS+PGM +++ K
Sbjct:    3 RECGQEGCTKTSTYGNEGSKKAEFCAKHSKPGMRDVLNK 41
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig1796.5487.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LDM3_ECTSI6.710e-10786.97EsV-1-7 n=1 Tax=Ectocarpus siliculosus TaxID=2880 ... [more]
A0A6H5KWV5_9PHAE4.690e-658.97Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig1796contigEcto-sp13_S_contig1796:4263..11291 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig1796.5487.1mRNA_Ecto-sp13_S_contig1796.5487.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig1796 4263..11291 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig1796.5487.1 ID=prot_Ecto-sp13_S_contig1796.5487.1|Name=mRNA_Ecto-sp13_S_contig1796.5487.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=644bp
STSRRALLYYTFLYSSTGPAENMTNEENMEVVPEMKECRHAGCTKMLSHE
TTPTSSKAEFCPEHSEGDGVANRPPTTFDEYSAPAAGRTTKKKYTPTKRK
CAYPGCLKTPSYGNEGSKKAQFCSPHSRPGMLNIVTKRCGRPGCVKAARF
GVQGSKKPEFCTSHAVAGMIDLVGKRCGHQGCLKYATYGVAGSRTKEFCP
AHAKEGMVVLGKKTCAYSGCNTFRSFAVEGSKKAEFCSFHAAPGMVNVCG
RKCAHLGCSTTPTYGEPGSNKGKFCVVHARQDMVDVCSKRCVHPGCTTRP
SFNVQGGRAGIFCKSHAREGMVCIRSRTCSQQGCKRKPTQGLVGSSKAEF
CREHERGGMVTVVEFKMRGCIHPGCTKRSSFGARDAKNKKPEYCTVHKKE
GMVNVYTSAKGCAHPGCSKRPSYGAAGSGVKVVCPEHAADDMVPIGTATC
GHSGCTTSPSYGVEGTKKPRFCKRHAPPDTVNVVSKRCDHPWGCTAIANF
GSRETGNKKYCRRHVGGAMASQNGSVSTRGFSSEGTQDKDRQECGVPESS
FGPCGTSEKLTSRSPWPAQAEMSPERKGEEIETQASRPTIPLPTGVQDFG
VEGSCSSVGTGPLLESILGADPPRIKSEALALHAEERPEYEGGS
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