prot_Ecto-sp13_S_contig1796.5486.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig1796.5486.1
Unique Nameprot_Ecto-sp13_S_contig1796.5486.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length229
Homology
BLAST of mRNA_Ecto-sp13_S_contig1796.5486.1 vs. uniprot
Match: D8LDM2_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LDM2_ECTSI)

HSP 1 Score: 381 bits (978), Expect = 8.400e-130
Identity = 223/229 (97.38%), Postives = 224/229 (97.82%), Query Frame = 0
Query:    1 MKVAATWLAATAALASTPHDVEAFVASSKILRVGQPARLVASRSAPAATSSLPLSMAGEAPWKAFTTDVAKKVAVAATVAAVAFSTPGEALAARSGGRMGGRSFSSPSRSYSAPSAPSRSYAPSYGGGGTTVLPVXXXXXXXXXXXXXXSPFGFSPFGRPGVSFYGGGFGVNPVDLLVLGGVAYGVSQLVKGGGTSFGNLDDSPPSSLGEGVDVLKLQVAINCRDRGSN 229
            MKVAATWLAATAALASTPHDVEAFVASSK LRVGQPARLVASRSA AATSSLPLSMAGEAPWKAFTTDVAKKVAVAATVAAVAFSTPGEALAARSGGRMGGRSFSSPSRSYSAPSAPSRSYAPSYGGG TTV+P XXXXXXXXXXXXXXSPFGFSPFGRPGVSFYGGGFGVNPVDLLVLGGVAYGVSQLVKGGGTSFGNLDDSPPSSLGEGVDVLKLQVAINCRDR SN
Sbjct:    1 MKVAATWLAATAALASTPHDVEAFVASSKTLRVGQPARLVASRSASAATSSLPLSMAGEAPWKAFTTDVAKKVAVAATVAAVAFSTPGEALAARSGGRMGGRSFSSPSRSYSAPSAPSRSYAPSYGGGSTTVVPXXXXXXXXXXXXXXXSPFGFSPFGRPGVSFYGGGFGVNPVDLLVLGGVAYGVSQLVKGGGTSFGNLDDSPPSSLGEGVDVLKLQVAINCRDRSSN 229          
BLAST of mRNA_Ecto-sp13_S_contig1796.5486.1 vs. uniprot
Match: A0A7S2XX02_9STRA (Hypothetical protein (Fragment) n=2 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2XX02_9STRA)

HSP 1 Score: 91.3 bits (225), Expect = 6.830e-18
Identity = 85/173 (49.13%), Postives = 112/173 (64.74%), Query Frame = 0
Query:   65 FTTDVAKKVAVAAT-VAAVAFSTPGEALAARSGGRMGGRSFSS-PSRSYSAPSAPSRSYAPSYGGGGTTVLPVXXXXXXXXXXXXXX------SPFGFSPFGRPGVSFYGGGFGVNPVDLLVLGGVAYGVSQLVKGGGTS--FGNLDDSP-PSSLGEGVDVLKLQVAINCRDR 226
            F++D  K  A++A  +A   F TP E +AA+SGGR+GGRSFSS P+R Y++P    + YAPS G     ++PV XXX XXXXXXXXX      SPFGF      GVS++      NP++ +VLG VAYGV  ++ G  +S  +G LDD   PSSLG+GV VLK Q+A+N +DR
Sbjct:   54 FSSDGFKATALSALLIAGSLFVTPQETIAAQSGGRVGGRSFSSSPTRQYASPPV-QQQYAPSAG-----IVPVPXXXSXXXXXXXXXGFXXXMSPFGF------GVSYF------NPINAIVLGAVAYGVISIIGGLTSSGQWGTLDDEEGPSSLGQGVSVLKFQLALNVKDR 208          
BLAST of mRNA_Ecto-sp13_S_contig1796.5486.1 vs. uniprot
Match: A0A835ZEJ7_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZEJ7_9STRA)

HSP 1 Score: 80.5 bits (197), Expect = 5.260e-14
Identity = 72/165 (43.64%), Postives = 90/165 (54.55%), Query Frame = 0
Query:   71 KKVAVAATVAAVAFSTPGEALAARSGGRMGGRSFSSPS--RSYSAPSAPSR--SYAPSYGGGGTTVLPVXXXXXXXXXXXXXXSPFGFSPFGRPGVSFYGGGFGVNP--VDLLVLGGVAYGVSQLVKGGGTSFG-NLDDSPPSSLGEGVDVLKLQVAINCRDRGS 228
            K +A      A+   +P +A AARSGGR+GGRSFSSP+  RSYS         SY  SYGGG TT++P           XXXX    FSPFG  G  +Y          V+LL++GGV    SQL++   +S G +  D    SLG GV V+KLQVA+N  DR S
Sbjct:   54 KALATFTAAMAILAGSPHDAEAARSGGRVGGRSFSSPAPTRSYSXXXXXXXXXSYGGSYGGGATTIVPYRSSTTIIPMPXXXXM---FSPFGYGGSVYYXXXXXXXXXLVNLLLVGGVVLTASQLLRTQVSSGGWSSVDVEGGSLGRGVGVVKLQVALNASDRSS 215          
BLAST of mRNA_Ecto-sp13_S_contig1796.5486.1 vs. uniprot
Match: A0A4D9CU48_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9CU48_9STRA)

HSP 1 Score: 79.0 bits (193), Expect = 1.680e-13
Identity = 64/147 (43.54%), Postives = 83/147 (56.46%), Query Frame = 0
Query:   92 AARSGGRMGGRSF-SSPS--RSYSAPSAPSRSYAPSYGGGGTTVLPVXXXXXXXXXXXXXXSPFGFSPFGRPGVSFYGGGF-----GVNPVDLLVLGGVAYGVSQLVKG--GGTSFGNLDDSPPSSLGEGVDVLKLQVAINCRDRGS 228
            A RSGGR+GG  F S+PS  R YSAP  PSRSY+P    G  T   V                +GFSPF   G   +GGG      G++P+D+LVLGG+AY     +K   GG+ + ++DD+P SSLG GV VLK+QV +   DR +
Sbjct:  120 AQRSGGRVGGSGFRSAPSQTRRYSAP--PSRSYSP----GPATRGYVERVPMAVPVLPYGGYGYGFSPFSPFG---FGGGMVSYRTGISPIDVLVLGGLAYVAFNAIKNSIGGSQWDDVDDTP-SSLGAGVTVLKIQVGLQVADRSA 256          
BLAST of mRNA_Ecto-sp13_S_contig1796.5486.1 vs. uniprot
Match: W7TQN6_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TQN6_9STRA)

HSP 1 Score: 75.1 bits (183), Expect = 3.280e-13
Identity = 62/140 (44.29%), Postives = 80/140 (57.14%), Query Frame = 0
Query:   92 AARSGGRMGGRSF-SSPS--RSYSAPSAPSRSYAPSYGGGGTTVLPVXXXXXXXXXXXXXXSPFGFSPFGRPGVSFYGGGF-----GVNPVDLLVLGGVAYGVSQLVKG--GGTSFGNLDDSPPSSLGEGVDVLKLQVAI 221
            A RSGGR+GG  F S+PS  R YSAP  PSRSY+P    G  T   V                +GFSPF   G   +GGG      G++P+D+LVLGG+AY     +K   GG+ + ++DD+P SSLG GV VLK+QV +
Sbjct:   38 AQRSGGRVGGSGFRSAPSQTRRYSAP--PSRSYSP----GPATRGYVERVPMAVPVLPYGGYGYGFSPFSPFG---FGGGMVTYRTGISPIDVLVLGGLAYVAFNAIKNSIGGSQWDDVDDTP-SSLGAGVTVLKIQVGL 167          
BLAST of mRNA_Ecto-sp13_S_contig1796.5486.1 vs. uniprot
Match: A0A0P8DN19_9CYAN (Putative membrane protein n=5 Tax=Phormidium TaxID=1198 RepID=A0A0P8DN19_9CYAN)

HSP 1 Score: 56.2 bits (134), Expect = 9.300e-6
Identity = 58/160 (36.25%), Postives = 77/160 (48.12%), Query Frame = 0
Query:   69 VAKKVAVAATVAAVAFSTPGEALAARSGGRMGGRSFSSPSRSYSAPSAPSRSYAPS--YGGGGTTVLPVXXXXXXXXXXXXXXSPFGFSPFGRPGVSFYGGGFGVNPVDLLVLGGVAYGVSQLVKGGGTSFGNLDDSPPSSLGEGVDVLKLQVAINCRDR 226
            + K + +   +A + FS    ALAARSGGRMGG SF +PSRSYS        YAP+  YGGGG                      FGF PF  P   F GGGFG     +L++  +A  + +  +G   + G+ +   P SL   V V KLQV +  + R
Sbjct:   12 ILKSIFLVGVIAILFFSQADGALAARSGGRMGGGSFRAPSRSYS---XXXXXYAPNRGYGGGG----------------------FGF-PFLIPFFGF-GGGFG-GLFSILIVISLANFLVRSFRG---ATGDGEGGEPQSLNPAVSVAKLQVGLLAQAR 140          
BLAST of mRNA_Ecto-sp13_S_contig1796.5486.1 vs. uniprot
Match: UPI00168277FB (DUF1517 domain-containing protein n=2 Tax=unclassified Microcoleus TaxID=2642155 RepID=UPI00168277FB)

HSP 1 Score: 55.1 bits (131), Expect = 2.370e-5
Identity = 65/153 (42.48%), Postives = 85/153 (55.56%), Query Frame = 0
Query:   71 KKVAVAATVAAVAFSTPGEALAARSGGRMGGRSFSSPSRSYSAPSAPSRSYAPSYGGGGTTVLPVXXXXXXXXXXXXXXSPFGFSPFGRP--GVSFYGGGFGVNPVDLLVLGGVAYGVSQLVKGGGTSFGNLDDSPPSSLGEGVDVLKLQVAI 221
            K + V   V ++AFS    ALAAR+GGR+GG SFS+PSR++S+P    R+YAP  GGG             XXXXXXXX  FGF PF  P  GV   GGGFG     +L+   +A  + Q  +  GTS   LD + P+     V V ++QV +
Sbjct:   14 KSLLVVGLVISLAFSHADGALAARTGGRIGGGSFSAPSRTFSSP----RTYAPPGGGG---------YYPRXXXXXXXXXXFGF-PFLLPFWGV---GGGFG-GIFTILIFIAIANFLVQSFRRAGTSVEELDYNNPT-----VSVARVQVGL 143          
BLAST of mRNA_Ecto-sp13_S_contig1796.5486.1 vs. uniprot
Match: UPI001A0B20B2 (DUF1517 domain-containing protein n=1 Tax=Oscillatoriaceae cyanobacterium M7585_C2015_266 TaxID=2774341 RepID=UPI001A0B20B2)

HSP 1 Score: 53.5 bits (127), Expect = 7.600e-5
Identity = 56/159 (35.22%), Postives = 76/159 (47.80%), Query Frame = 0
Query:   69 VAKKVAVAATVAAVAFSTPGEALAARSGGRMGGRSFSSPSRSYSAPSAPSRSYAPS-YGGGGTTVLPVXXXXXXXXXXXXXXSPFGFSPFGRPGVSFYGGGFGVNPVDLLVLGGVAYGVSQLVKGGGTSFGNLDDSPPSSLGEGVDVLKLQVAINCRDR 226
            V K +   A +  +AFS    ALAAR+GGR+GG SF+ PSRSYS+P    RSY+P  YGGG                       FGF PF  P   F+GGGFG     +L+   +A  + Q  +        L+ + P+     V V K+QV +  + R
Sbjct:    5 VFKSLLALALIFILAFSHADSALAARTGGRIGGGSFNIPSRSYSSP----RSYSPGGYGGG----------------YYPGGGGFGF-PFLIP--LFWGGGFG-GVFSILIFIAIANFIVQSFRSSSEFSDELEYTNPT-----VSVAKVQVGLLAQAR 134          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig1796.5486.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 8
Match NameE-valueIdentityDescription
D8LDM2_ECTSI8.400e-13097.38Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A7S2XX02_9STRA6.830e-1849.13Hypothetical protein (Fragment) n=2 Tax=Fibrocapsa... [more]
A0A835ZEJ7_9STRA5.260e-1443.64Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A4D9CU48_9STRA1.680e-1343.54Uncharacterized protein n=1 Tax=Nannochloropsis sa... [more]
W7TQN6_9STRA3.280e-1344.29Uncharacterized protein n=1 Tax=Nannochloropsis ga... [more]
A0A0P8DN19_9CYAN9.300e-636.25Putative membrane protein n=5 Tax=Phormidium TaxID... [more]
UPI00168277FB2.370e-542.48DUF1517 domain-containing protein n=2 Tax=unclassi... [more]
UPI001A0B20B27.600e-535.22DUF1517 domain-containing protein n=1 Tax=Oscillat... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR33975FAMILY NOT NAMEDcoord: 61..221
NoneNo IPR availablePANTHERPTHR33975:SF2MYELIN-ASSOCIATED OLIGODENDROCYTE BASIC PROTEINcoord: 61..221
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..2
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 15..23
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 3..14
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..23
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 24..229
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..23
score: 0.483

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig1796contigEcto-sp13_S_contig1796:2..3774 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig1796.5486.1mRNA_Ecto-sp13_S_contig1796.5486.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig1796 2..3774 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig1796.5486.1 ID=prot_Ecto-sp13_S_contig1796.5486.1|Name=mRNA_Ecto-sp13_S_contig1796.5486.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=229bp
MKVAATWLAATAALASTPHDVEAFVASSKILRVGQPARLVASRSAPAATS
SLPLSMAGEAPWKAFTTDVAKKVAVAATVAAVAFSTPGEALAARSGGRMG
GRSFSSPSRSYSAPSAPSRSYAPSYGGGGTTVLPVPVPMGGYGMGYGFGS
PFGFSPFGRPGVSFYGGGFGVNPVDLLVLGGVAYGVSQLVKGGGTSFGNL
DDSPPSSLGEGVDVLKLQVAINCRDRGSN
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