prot_Ecto-sp13_S_contig17957.5484.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig17957.5484.1
Unique Nameprot_Ecto-sp13_S_contig17957.5484.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length137
Homology
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BLAST of mRNA_Ecto-sp13_S_contig17957.5484.1 vs. uniprot
Match: D7FXZ4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FXZ4_ECTSI)

HSP 1 Score: 189 bits (481), Expect = 8.850e-60
Identity = 97/116 (83.62%), Postives = 106/116 (91.38%), Query Frame = 0 
Query:    1 MSDLCRMTSGGQNLPAVEQKDRVDKAVAALQQLFLGRDGPRQAAPAHDVRVLTLLEKVALSGPGESGNLDEVATVLSAALSKLSLGADPGCKRDDETEEMEDQTENRTQIPGQMCG 116
            MS+LCRMT GGQN+PAVE KDRVD+AVAAL+QL LG DGPRQAAPA D+RVLTLLEKV LSGPGESGNL+EVATVLSAAL KLSLGADPGCKRDDE EEMED+T++RTQI GQM G
Sbjct:    1 MSELCRMTIGGQNVPAVELKDRVDQAVAALEQLSLGGDGPRQAAPAQDLRVLTLLEKVTLSGPGESGNLEEVATVLSAALFKLSLGADPGCKRDDEKEEMEDKTQHRTQISGQMYG 116
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig17957.5484.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7FXZ4_ECTSI8.850e-6083.62Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig17957contigEcto-sp13_S_contig17957:679..1381 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig17957.5484.1mRNA_Ecto-sp13_S_contig17957.5484.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig17957 679..1381 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig17957.5484.1 ID=prot_Ecto-sp13_S_contig17957.5484.1|Name=mRNA_Ecto-sp13_S_contig17957.5484.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=137bp
MSDLCRMTSGGQNLPAVEQKDRVDKAVAALQQLFLGRDGPRQAAPAHDVR
VLTLLEKVALSGPGESGNLDEVATVLSAALSKLSLGADPGCKRDDETEEM
EDQTENRTQIPGQMCGTLRSICPAGGRLSGASPSRN*
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