prot_Ecto-sp13_S_contig17956.5483.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig17956.5483.1
Unique Nameprot_Ecto-sp13_S_contig17956.5483.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length211
Homology
BLAST of mRNA_Ecto-sp13_S_contig17956.5483.1 vs. uniprot
Match: A0A6H5L0Z0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L0Z0_9PHAE)

HSP 1 Score: 404 bits (1038), Expect = 4.540e-139
Identity = 200/211 (94.79%), Postives = 206/211 (97.63%), Query Frame = 0
Query:    1 ILKSNACPQAISKEEAAALKADESLPGGILSVGSLDAIGRSGNHYEVVTRVFSMSFCCQYKVVTMPEQDTVLPTENGGTLELRHNTYSFSSADAALRTEHLGYGDISTDPEICPPIKHLSGQKTKEFTREGVHERLLQCMLRVEMIGCVAHFLHDVVGADDAFCRWKHEGEEERRSLLRATSAEEGEDKRHAGSSPQGKGQSLVVHMRSGD 211
            + +S+ACPQAISKEEAAAL+ADESLPGGILSVGSLDAIGRSGNHYEVVTRVFSMSFCCQYKVV MPEQDTVLPTENG TLELRHNTYSFSSADAALRTEHLGYGDI+TDPEICPPIKHLSGQKTKEFTREGVHERLLQCMLRVEMIGCVAHFLHDVVGADDAFCRWK EG+EERRSLLRATSA EGEDKRHAGSSPQGKGQSLVVHMRSGD
Sbjct:   37 VFQSDACPQAISKEEAAALEADESLPGGILSVGSLDAIGRSGNHYEVVTRVFSMSFCCQYKVVRMPEQDTVLPTENGDTLELRHNTYSFSSADAALRTEHLGYGDIATDPEICPPIKHLSGQKTKEFTREGVHERLLQCMLRVEMIGCVAHFLHDVVGADDAFCRWKDEGKEERRSLLRATSAVEGEDKRHAGSSPQGKGQSLVVHMRSGD 247          
BLAST of mRNA_Ecto-sp13_S_contig17956.5483.1 vs. uniprot
Match: D8LSV8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LSV8_ECTSI)

HSP 1 Score: 306 bits (783), Expect = 3.480e-104
Identity = 147/158 (93.04%), Postives = 154/158 (97.47%), Query Frame = 0
Query:   54 MSFCCQYKVVTMPEQDTVLPTENGGTLELRHNTYSFSSADAALRTEHLGYGDISTDPEICPPIKHLSGQKTKEFTREGVHERLLQCMLRVEMIGCVAHFLHDVVGADDAFCRWKHEGEEERRSLLRATSAEEGEDKRHAGSSPQGKGQSLVVHMRSGD 211
            MSFCCQYKVVTMPEQDTVLPTENG TLELRHNTYSFSSADAALRTEHLGYGDISTDPEICPPIKHLSGQKTKEFTREGVHERLLQCMLRVEMIGCVAHFLHDVVGADDAFC WK EGEEERRSLLRATSAEEG+DKR+AG+SP+GKGQSLVVH++ G+
Sbjct:    1 MSFCCQYKVVTMPEQDTVLPTENGDTLELRHNTYSFSSADAALRTEHLGYGDISTDPEICPPIKHLSGQKTKEFTREGVHERLLQCMLRVEMIGCVAHFLHDVVGADDAFCSWKDEGEEERRSLLRATSAEEGQDKRNAGTSPRGKGQSLVVHIKRGN 158          
BLAST of mRNA_Ecto-sp13_S_contig17956.5483.1 vs. uniprot
Match: A0A6H5L7B0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L7B0_9PHAE)

HSP 1 Score: 126 bits (317), Expect = 6.590e-31
Identity = 80/222 (36.04%), Postives = 119/222 (53.60%), Query Frame = 0
Query:    1 ILKSNACPQAISKEEAAALKADESLPGGILSVGSLDAIGRSGNHYEVVTRVFSMSFCCQYKVVTMPEQDTVLPTENGGTLELRHNTYSFSSADAALRTEHLGYGDISTDPE-------ICPPIKHLSGQKTKEFTREGVHERLLQCMLRVEMIGCVAHFLHDVVGADDAFC----RWKHEGEEERRSLLRATSAEEGEDKRHAGSSPQGKGQSLVVHMRSGD 211
            +++   CPQAIS +EA   ++    PGG+L++ S++ IGRSGNHY  ++ +FSM+FCCQ KV+ +P+ D  LPTE+G   +   N +SFS             G + TD E       +CP  + + G         G+H  L +CM  V+M GC A +L + +G + A C    R   E E+E   L+  T++    ++R AGS        LVVH+RSGD
Sbjct:   42 VVQDRGCPQAISPDEADIRRSTRGWPGGVLTLSSIERIGRSGNHYMAISTLFSMAFCCQVKVLELPDMDWRLPTESGERFKSSTNLFSFSQRHTNRAPPQYINGSLPTDFEGLQGRLDVCPHERLIDGTHANHI--RGLHPHLQKCMRNVKMRGCEAAYLKESLGGEHA-CPSPQRQLAEREDESAQLVAGTTSPL--ERRGAGS--------LVVHVRSGD 250          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig17956.5483.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
A0A6H5L0Z0_9PHAE4.540e-13994.79Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LSV8_ECTSI3.480e-10493.04Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5L7B0_9PHAE6.590e-3136.04Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig17956contigEcto-sp13_S_contig17956:673..2521 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig17956.5483.1mRNA_Ecto-sp13_S_contig17956.5483.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig17956 673..2521 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig17956.5483.1 ID=prot_Ecto-sp13_S_contig17956.5483.1|Name=mRNA_Ecto-sp13_S_contig17956.5483.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=211bp
ILKSNACPQAISKEEAAALKADESLPGGILSVGSLDAIGRSGNHYEVVTR
VFSMSFCCQYKVVTMPEQDTVLPTENGGTLELRHNTYSFSSADAALRTEH
LGYGDISTDPEICPPIKHLSGQKTKEFTREGVHERLLQCMLRVEMIGCVA
HFLHDVVGADDAFCRWKHEGEEERRSLLRATSAEEGEDKRHAGSSPQGKG
QSLVVHMRSGD
back to top