mRNA_Ecto-sp13_S_contig17950.5481.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig17950.5481.1 vs. uniprot
Match: A0A6H5L3H7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L3H7_9PHAE) HSP 1 Score: 328 bits (840), Expect = 1.800e-112 Identity = 163/168 (97.02%), Postives = 166/168 (98.81%), Query Frame = 1
Query: 1 MGQRHGKAVYDSAAKPFLNLSLAAVGTLWETFNDVADGFGINLHEFLEICSELGEELQLNRAKLDKVKLSTALFKLLDTDNNGLIDAIEFVSAMACASGMSVTDTLEFVLNCYDFDGTGRLTIDEISLAFKSTVTGMCKLEGTGAGADAGLKVCPRDVDFEAAAINAF 504
MGQRHGKAVYDSAAKPFLNLSLAAVGTLWETFNDVADGFGINLHEFLEICSELGEELQLNRAKLDKVKLSTALFKLLDTDNNGLIDAIEFVSAMACASGMSVTDTLEFVL+CYDFDGTGRLTIDEISLAFKSTVTGMCKLEGTGAG DAGLK CPRD+DFEAAA+NAF
Sbjct: 1 MGQRHGKAVYDSAAKPFLNLSLAAVGTLWETFNDVADGFGINLHEFLEICSELGEELQLNRAKLDKVKLSTALFKLLDTDNNGLIDAIEFVSAMACASGMSVTDTLEFVLSCYDFDGTGRLTIDEISLAFKSTVTGMCKLEGTGAGVDAGLKACPRDIDFEAAAMNAF 168
BLAST of mRNA_Ecto-sp13_S_contig17950.5481.1 vs. uniprot
Match: D7FR21_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FR21_ECTSI) HSP 1 Score: 323 bits (828), Expect = 2.460e-99 Identity = 164/168 (97.62%), Postives = 165/168 (98.21%), Query Frame = 1
Query: 1 MGQRHGKAVYDSAAKPFLNLSLAAVGTLWETFNDVADGFGINLHEFLEICSELGEELQLNRAKLDKVKLSTALFKLLDTDNNGLIDAIEFVSAMACASGMSVTDTLEFVLNCYDFDGTGRLTIDEISLAFKSTVTGMCKLEGTGAGADAGLKVCPRDVDFEAAAINAF 504
MGQRHGKAVYDSAAKPFLNLSLAAVGTLWETFNDVADGFGINLHEFLEICSELGEELQLNRAKLDK LSTALFKLLDTDNNGLIDAIEFVSAMACASGMSVTDTLEFVLNCYDFDGTGRLTIDEISLAFKSTVTGMCKLEGTGAGADAGLK CPRDVDFEAAA+NAF
Sbjct: 1 MGQRHGKAVYDSAAKPFLNLSLAAVGTLWETFNDVADGFGINLHEFLEICSELGEELQLNRAKLDK--LSTALFKLLDTDNNGLIDAIEFVSAMACASGMSVTDTLEFVLNCYDFDGTGRLTIDEISLAFKSTVTGMCKLEGTGAGADAGLKACPRDVDFEAAAMNAF 166
BLAST of mRNA_Ecto-sp13_S_contig17950.5481.1 vs. uniprot
Match: A0A6A4ZRG4_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A6A4ZRG4_9STRA) HSP 1 Score: 154 bits (389), Expect = 1.120e-43 Identity = 78/168 (46.43%), Postives = 113/168 (67.26%), Query Frame = 1
Query: 1 MGQRHGKAVYDSAAKPFLNLSLAAVGTLWETFNDVADGFGINLHEFLEICSELGEELQLNRAKLDKVKLSTALFKLLDTDNNGLIDAIEFVSAMACASGMSVTDTLEFVLNCYDFDGTGRLTIDEISLAFKSTVTGMCKLEGTGAGADAGLKVCPRDVDFEAAAINAF 504
MGQ HGKA + +AA PF+N+S V WE+FNDVA+GFGIN E ++ICS L + ++ +AK + +++ LF +DTD NGL+DA+EF+ A+A S M++ + FV NCYDF+ +G +TIDE++LA KST+TG+CKL G + CP ++ E A+ AF
Sbjct: 1 MGQLHGKATFANAALPFVNISEKDVNKCWESFNDVAEGFGINRVEMIDICSPLQDTFEI-KAKAEMERITGLLFDAMDTDENGLVDALEFLGALALLSAMTIPQKITFVYNCYDFNESGEITIDELTLAMKSTLTGLCKLS-IG-------RSCPTELVLEEIALFAF 159
BLAST of mRNA_Ecto-sp13_S_contig17950.5481.1 vs. uniprot
Match: F0YHF1_AURAN (EF-hand domain-containing protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YHF1_AURAN) HSP 1 Score: 161 bits (407), Expect = 1.070e-42 Identity = 83/163 (50.92%), Postives = 109/163 (66.87%), Query Frame = 1
Query: 16 GKAVYDSAAKPFLNLSLAAVGTLWETFNDVADGFGINLHEFLEICSELGEELQLNRAKLDKVKLSTALFKLLDTDNNGLIDAIEFVSAMACASGMSVTDTLEFVLNCYDFDGTGRLTIDEISLAFKSTVTGMCKLEGTGAGADAGLKVCPRDVDFEAAAINAF 504
GKA Y + A+ F+NLS A+ +WE+FNDVADGFGI+L E IC EL EL++ R LDK ALF +D+D N L+DAIEFVS +A SGMS D LEFV C+DFDG G+L++DEI+LAF+ T+ G+CKL G ++CP + + E A+ AF
Sbjct: 3 GKARYHAKARAFVNLSAGAIEAVWESFNDVADGFGISLGEMQLICQELTSELEIGRPLLDKQV--EALFIRMDSDENALVDAIEFVSTLAMTSGMSAHDKLEFVFTCFDFDGAGQLSVDEITLAFRCTLMGLCKLTG---------QICPCEEELEVVAMRAF 154
BLAST of mRNA_Ecto-sp13_S_contig17950.5481.1 vs. uniprot
Match: A0A7S3JT59_9STRA (Hypothetical protein (Fragment) n=1 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A7S3JT59_9STRA) HSP 1 Score: 151 bits (381), Expect = 1.330e-42 Identity = 80/167 (47.90%), Postives = 107/167 (64.07%), Query Frame = 1
Query: 1 MGQRHGKAVYDSAAKPFLNLSLAAVGTLWETFNDVADGFGINLHEFLEICSELGEELQLNRAKLDKVKLSTALFKLLDTDNNGLIDAIEFVSAMACASGMSVTDTLEFVLNCYDFDGTGRLTIDEISLAFKSTVTGMCKLEGTGAGADAGLKVCPRDVDFEAAAINA 501
MGQ+ GK Y+ + F+N+S + ++WE FNDVADGFGINL E IC +L ELQL+ L+K L LFK LDTD NGLIDA+E + +A ASGMS L F+L C+DFDGT RL++DE++LA + ++ G+CKL A G + P + + E AI A
Sbjct: 14 MGQKVGKVAYEPNLESFINISTGGIESIWEAFNDVADGFGINLGETQLICGQLANELQLDVQALEK--LVETLFKRLDTDENGLIDALEMLCGLAVASGMSSGQKLSFLLRCFDFDGTSRLSVDEVTLALRCSLVGVCKL------AIVGEAIPPTEDELEIIAIRA 172
BLAST of mRNA_Ecto-sp13_S_contig17950.5481.1 vs. uniprot
Match: A0A1V9YLP3_9STRA (Microtubule-associated protein n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9YLP3_9STRA) HSP 1 Score: 157 bits (398), Expect = 1.730e-41 Identity = 78/168 (46.43%), Postives = 113/168 (67.26%), Query Frame = 1
Query: 1 MGQRHGKAVYDSAAKPFLNLSLAAVGTLWETFNDVADGFGINLHEFLEICSELGEELQLNRAKLDKVKLSTALFKLLDTDNNGLIDAIEFVSAMACASGMSVTDTLEFVLNCYDFDGTGRLTIDEISLAFKSTVTGMCKLEGTGAGADAGLKVCPRDVDFEAAAINAF 504
MGQ HGKA + AA PFLN+S V WE+FNDVA+GFGIN E ++ICS L + ++ +AK + +++ LF+ +DTD NGL+DA+EF+ ++A S M+V + FV NCYDF+ +G +TIDE++L+ KST+TG+CKL + CP +V E A++AF
Sbjct: 1 MGQLHGKASFVQAALPFLNISEKDVNKCWESFNDVAEGFGINKAELIDICSPLQDTFEI-KAKTEMERITALLFEAMDTDENGLVDALEFLGSLALLSAMTVPQKITFVYNCYDFNESGEITIDELTLSMKSTLTGLCKLSVA--------RPCPTEVMLEEIALHAF 159
BLAST of mRNA_Ecto-sp13_S_contig17950.5481.1 vs. uniprot
Match: A0A024TA71_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024TA71_9STRA) HSP 1 Score: 155 bits (391), Expect = 1.980e-41 Identity = 79/168 (47.02%), Postives = 113/168 (67.26%), Query Frame = 1
Query: 1 MGQRHGKAVYDSAAKPFLNLSLAAVGTLWETFNDVADGFGINLHEFLEICSELGEELQLNRAKLDKVKLSTALFKLLDTDNNGLIDAIEFVSAMACASGMSVTDTLEFVLNCYDFDGTGRLTIDEISLAFKSTVTGMCKLEGTGAGADAGLKVCPRDVDFEAAAINAF 504
MGQ HGKA + +AA PFLN+S V WE+FNDVA+GFGIN E ++ICS L + ++ +AK + +++ LF +DTD NGL+DA+EF+ A+A S M++ + FV NCYDF+ +G +TIDE++LA KST+TG+CKL G + CP ++ E A+ AF
Sbjct: 1 MGQLHGKASFATAALPFLNISEKDVNKCWESFNDVAEGFGINRIEMIDICSPLQDSFEI-KAKAEMERITGLLFDAMDTDENGLVDALEFLGALALLSAMTIPQKITFVYNCYDFNESGEITIDELTLAMKSTLTGLCKLS-IG-------RSCPTELVLEEIALFAF 159
BLAST of mRNA_Ecto-sp13_S_contig17950.5481.1 vs. uniprot
Match: A0A067CF97_SAPPC (Uncharacterized protein n=2 Tax=Saprolegnia TaxID=4769 RepID=A0A067CF97_SAPPC) HSP 1 Score: 156 bits (394), Expect = 5.970e-41 Identity = 78/168 (46.43%), Postives = 111/168 (66.07%), Query Frame = 1
Query: 1 MGQRHGKAVYDSAAKPFLNLSLAAVGTLWETFNDVADGFGINLHEFLEICSELGEELQLNRAKLDKVKLSTALFKLLDTDNNGLIDAIEFVSAMACASGMSVTDTLEFVLNCYDFDGTGRLTIDEISLAFKSTVTGMCKLEGTGAGADAGLKVCPRDVDFEAAAINAF 504
MGQ HGKA + A PFLNLS V WE+FNDVA+GFGIN E ++ICS L + ++ +AK + +++ LF+ +DTD NGL+DA+EF+ A+A S M+V + FV NCYDF+ +G +TIDE++L+ KST+TG+CKL + CP +V E ++ AF
Sbjct: 1 MGQLHGKASFVQAGLPFLNLSEKDVNKCWESFNDVAEGFGINKAEMIDICSPLQDTFEI-KAKAEMERITALLFEAMDTDENGLVDALEFLGALALLSAMTVPQKITFVYNCYDFNESGEITIDELTLSMKSTLTGLCKLSIA--------RPCPTEVMLEEISLQAF 159
BLAST of mRNA_Ecto-sp13_S_contig17950.5481.1 vs. uniprot
Match: A0A485LR91_9STRA (Aste57867_24752 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485LR91_9STRA) HSP 1 Score: 155 bits (391), Expect = 1.510e-40 Identity = 78/168 (46.43%), Postives = 112/168 (66.67%), Query Frame = 1
Query: 1 MGQRHGKAVYDSAAKPFLNLSLAAVGTLWETFNDVADGFGINLHEFLEICSELGEELQLNRAKLDKVKLSTALFKLLDTDNNGLIDAIEFVSAMACASGMSVTDTLEFVLNCYDFDGTGRLTIDEISLAFKSTVTGMCKLEGTGAGADAGLKVCPRDVDFEAAAINAF 504
MGQ HGKA + +AA PFLN+S V WE+FNDVA+GFGIN E ++ICS L + ++ +AK + +++ LF +DTD NGL+DA+EF+ A+A S M++ + FV NCYDF+ +G +TIDE++LA KST+TG+CKL + CP ++ E A+ AF
Sbjct: 1 MGQLHGKATFVNAALPFLNISEKDVNKCWESFNDVAEGFGINRAEMIDICSPLQDTFEI-KAKSEMERITGLLFDAMDTDENGLVDALEFLGALALLSAMTIPQKITFVYNCYDFNESGEITIDELTLAMKSTLTGLCKL--------CMGRSCPTEIVLEEIALFAF 159
BLAST of mRNA_Ecto-sp13_S_contig17950.5481.1 vs. uniprot
Match: A0A8K1C8I5_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1C8I5_PYTOL) HSP 1 Score: 154 bits (390), Expect = 2.070e-40 Identity = 80/168 (47.62%), Postives = 110/168 (65.48%), Query Frame = 1
Query: 1 MGQRHGKAVYDSAAKPFLNLSLAAVGTLWETFNDVADGFGINLHEFLEICSELGEELQLNRAKLDKVKLSTALFKLLDTDNNGLIDAIEFVSAMACASGMSVTDTLEFVLNCYDFDGTGRLTIDEISLAFKSTVTGMCKLEGTGAGADAGLKVCPRDVDFEAAAINAF 504
MGQ HGKA Y AA PFLN S V LWE FNDVA+GFG+N E EIC L L+++ AK+D +L+ LF DTD NGL+DA+EF+ +A S M++ L FV NCYDF+ + +++IDE++LA +ST+TG+CKL G+ +CP ++ E A++AF
Sbjct: 1 MGQLHGKAAYAQAATPFLNASEKDVNKLWEAFNDVAEGFGLNQDEMCEICRSLMPTLEIH-AKIDMDQLTIPLFNAFDTDENGLVDALEFLGTIAIMSAMTIRQKLTFVYNCYDFNESSQISIDELTLALRSTLTGLCKLSS-------GV-LCPTELVLEDMALHAF 159 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig17950.5481.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig17950.5481.1 >prot_Ecto-sp13_S_contig17950.5481.1 ID=prot_Ecto-sp13_S_contig17950.5481.1|Name=mRNA_Ecto-sp13_S_contig17950.5481.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=168bp MGQRHGKAVYDSAAKPFLNLSLAAVGTLWETFNDVADGFGINLHEFLEICback to top mRNA from alignment at Ecto-sp13_S_contig17950:958..2398+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig17950.5481.1 ID=mRNA_Ecto-sp13_S_contig17950.5481.1|Name=mRNA_Ecto-sp13_S_contig17950.5481.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=1441bp|location=Sequence derived from alignment at Ecto-sp13_S_contig17950:958..2398+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig17950:958..2398+ >mRNA_Ecto-sp13_S_contig17950.5481.1 ID=mRNA_Ecto-sp13_S_contig17950.5481.1|Name=mRNA_Ecto-sp13_S_contig17950.5481.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=504bp|location=Sequence derived from alignment at Ecto-sp13_S_contig17950:958..2398+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top |