prot_Ecto-sp13_S_contig17932.5471.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig17932.5471.1
Unique Nameprot_Ecto-sp13_S_contig17932.5471.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length148
Homology
BLAST of mRNA_Ecto-sp13_S_contig17932.5471.1 vs. uniprot
Match: A0A6H5KY11_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KY11_9PHAE)

HSP 1 Score: 269 bits (687), Expect = 1.420e-85
Identity = 132/139 (94.96%), Postives = 133/139 (95.68%), Query Frame = 0
Query:    4 EKPPVRKTSDFRDRVDESLRYLLPQDSNVPYDMKHVVSKVVDDNTYFEIMPDWARNITVGFARMEGHPVGIVANNPMFLAGCLDIDSSTKAKVQRKQAARFVRFCDAFNIPLLTFVDVPGFLPGTAQEHGGIIRHGSKV 142
            EKPPVRKTSD RDRVDESLRYLLPQDSNVPYDMKHVVSKVVDDNTYFEIMPDWARNITVGFARMEGHPVGIVANNPMFLAGCLDIDSSTKA   R  AARFVRFCDAFNIPLLTFVDVPGFLPGTAQEHGGIIRHGSK+
Sbjct:  283 EKPPVRKTSDSRDRVDESLRYLLPQDSNVPYDMKHVVSKVVDDNTYFEIMPDWARNITVGFARMEGHPVGIVANNPMFLAGCLDIDSSTKA---RGGAARFVRFCDAFNIPLLTFVDVPGFLPGTAQEHGGIIRHGSKL 418          
BLAST of mRNA_Ecto-sp13_S_contig17932.5471.1 vs. uniprot
Match: UPI0019C7457C (Acyl-CoA carboxylase subunit beta n=1 Tax=Pseudorhodobacter sp. TaxID=1934400 RepID=UPI0019C7457C)

HSP 1 Score: 192 bits (487), Expect = 1.010e-57
Identity = 91/139 (65.47%), Postives = 111/139 (79.86%), Query Frame = 0
Query:    4 EKPPVRKTSDFRDRVDESLRYLLPQDSNVPYDMKHVVSKVVDDNTYFEIMPDWARNITVGFARMEGHPVGIVANNPMFLAGCLDIDSSTKAKVQRKQAARFVRFCDAFNIPLLTFVDVPGFLPGTAQEHGGIIRHGSKV 142
            EK PVRK++D  DR+D SL  L+P ++N PYD+K ++ KV DD  +FE+ PD+A+NI +GF RMEGH VGIVAN PM LAGCLDI SS KA       ARFVRFCDAFNIP++TFVDVPGFLPGT+QEHGGII+HG+K+
Sbjct:   90 EKAPVRKSNDRADRIDISLDTLVPDNANKPYDIKELIVKVSDDGDFFELQPDYAKNIVIGFCRMEGHTVGIVANQPMVLAGCLDIKSSIKA-------ARFVRFCDAFNIPVVTFVDVPGFLPGTSQEHGGIIKHGAKL 221          
BLAST of mRNA_Ecto-sp13_S_contig17932.5471.1 vs. uniprot
Match: A0A836CAR6_9STRA (Propionyl-CoA carboxylase beta chain mitochondrial n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CAR6_9STRA)

HSP 1 Score: 195 bits (495), Expect = 3.490e-57
Identity = 93/139 (66.91%), Postives = 111/139 (79.86%), Query Frame = 0
Query:    4 EKPPVRKTSDFRDRVDESLRYLLPQDSNVPYDMKHVVSKVVDDNTYFEIMPDWARNITVGFARMEGHPVGIVANNPMFLAGCLDIDSSTKAKVQRKQAARFVRFCDAFNIPLLTFVDVPGFLPGTAQEHGGIIRHGSKV 142
            E  PVR T D R+R   +LR ++PQD N+PYDM  +VSKV+DDN +++IMPD+A+NI VGF RMEG  VG+VANNP  LAGCLDI+SSTK        ARFVRFCD+FNIPLLTFVDVPGFLPGT QE+GGIIRHG+K+
Sbjct:  267 EAVPVRSTCDTRERAIPALRRIIPQDPNIPYDMVEIVSKVLDDNNFYQIMPDYAKNIVVGFGRMEGRTVGVVANNPSSLAGCLDINSSTKG-------ARFVRFCDSFNIPLLTFVDVPGFLPGTDQEYGGIIRHGAKL 398          
BLAST of mRNA_Ecto-sp13_S_contig17932.5471.1 vs. uniprot
Match: A0A520D1F2_9BURK (Acyl-CoA carboxylase subunit beta (Fragment) n=1 Tax=Variovorax sp. TaxID=1871043 RepID=A0A520D1F2_9BURK)

HSP 1 Score: 190 bits (483), Expect = 3.740e-57
Identity = 89/139 (64.03%), Postives = 112/139 (80.58%), Query Frame = 0
Query:    4 EKPPVRKTSDFRDRVDESLRYLLPQDSNVPYDMKHVVSKVVDDNTYFEIMPDWARNITVGFARMEGHPVGIVANNPMFLAGCLDIDSSTKAKVQRKQAARFVRFCDAFNIPLLTFVDVPGFLPGTAQEHGGIIRHGSKV 142
            EKPPVR + D  DR D SL  L+P+++N PYDMK +++KVVDD  +FE+ PD+A+NI +GFARMEG  +GIVAN P+ LAGCLDI SS KA       ARFVRFCDAFNIP++TFVDVPGF+PGT+QE+GGII+HG+K+
Sbjct:  142 EKPPVRPSGDPADRADLSLDTLVPENANKPYDMKELITKVVDDGDFFELQPDYAKNIVIGFARMEGQSIGIVANQPLVLAGCLDIKSSIKA-------ARFVRFCDAFNIPVVTFVDVPGFMPGTSQEYGGIIKHGAKL 273          
BLAST of mRNA_Ecto-sp13_S_contig17932.5471.1 vs. uniprot
Match: A0A1E5QA07_9PROT (Methylmalonyl-CoA carboxyltransferase n=1 Tax=Magnetovibrio blakemorei TaxID=28181 RepID=A0A1E5QA07_9PROT)

HSP 1 Score: 194 bits (492), Expect = 7.780e-57
Identity = 93/139 (66.91%), Postives = 111/139 (79.86%), Query Frame = 0
Query:    4 EKPPVRKTSDFRDRVDESLRYLLPQDSNVPYDMKHVVSKVVDDNTYFEIMPDWARNITVGFARMEGHPVGIVANNPMFLAGCLDIDSSTKAKVQRKQAARFVRFCDAFNIPLLTFVDVPGFLPGTAQEHGGIIRHGSKV 142
            EKPPVR T+DF DRV+ SL  L+P + N PYDMK ++ KVVD+  +FE+MP +A NI +GFARMEG  VGIVAN PM LAGCLDI+SS KA       ARFVR+CDAFNIP++TFVDVPGFLPGT+QEHGGII HG+K+
Sbjct:  251 EKPPVRPTADFSDRVEMSLDTLIPDNPNKPYDMKELIEKVVDEGDFFELMPKYAGNILIGFARMEGSTVGIVANQPMVLAGCLDINSSIKA-------ARFVRYCDAFNIPIVTFVDVPGFLPGTSQEHGGIITHGAKL 382          
BLAST of mRNA_Ecto-sp13_S_contig17932.5471.1 vs. uniprot
Match: A0A523NTV8_9PROT (Acyl-CoA carboxylase subunit beta n=1 Tax=Proteobacteria bacterium TaxID=1977087 RepID=A0A523NTV8_9PROT)

HSP 1 Score: 193 bits (491), Expect = 1.090e-56
Identity = 91/140 (65.00%), Postives = 113/140 (80.71%), Query Frame = 0
Query:    3 TEKPPVRKTSDFRDRVDESLRYLLPQDSNVPYDMKHVVSKVVDDNTYFEIMPDWARNITVGFARMEGHPVGIVANNPMFLAGCLDIDSSTKAKVQRKQAARFVRFCDAFNIPLLTFVDVPGFLPGTAQEHGGIIRHGSKV 142
            TE+PP R T D  DR++ SL  L+P +SN+PYDMK +++K+VD+  +FE+ P++A+NI +GF R+ G PVGIVAN PM LAGCLDIDSS KA       ARFVRFCDAFNIP++TFVDVPGFLPGTAQEHGGIIRHG+K+
Sbjct:  250 TERPPQRVTDDPPDRLEMSLDTLVPANSNLPYDMKELINKIVDEGDFFELQPEFAQNIVIGFGRLHGAPVGIVANQPMVLAGCLDIDSSCKA-------ARFVRFCDAFNIPIVTFVDVPGFLPGTAQEHGGIIRHGAKL 382          
BLAST of mRNA_Ecto-sp13_S_contig17932.5471.1 vs. uniprot
Match: A0A0F2RAK7_9PROT (Methylmalonyl-CoA carboxyltransferase n=4 Tax=Rhodospirillaceae TaxID=41295 RepID=A0A0F2RAK7_9PROT)

HSP 1 Score: 192 bits (489), Expect = 2.160e-56
Identity = 93/139 (66.91%), Postives = 111/139 (79.86%), Query Frame = 0
Query:    4 EKPPVRKTSDFRDRVDESLRYLLPQDSNVPYDMKHVVSKVVDDNTYFEIMPDWARNITVGFARMEGHPVGIVANNPMFLAGCLDIDSSTKAKVQRKQAARFVRFCDAFNIPLLTFVDVPGFLPGTAQEHGGIIRHGSKV 142
            EKPPVR T+D  DR D SL  L+P + N+PYDMK +++KVVD+  ++EI PD+ARNI  GFARMEG  +GIVAN PM LAGCLDIDSS KA       ARFVRFCDAFNIP++TFVDVPGFLPGT QE+GGII+HG+K+
Sbjct:  251 EKPPVRPTADPADREDFSLDTLIPNNPNMPYDMKELITKVVDEGDFYEIAPDYARNIITGFARMEGSTIGIVANQPMVLAGCLDIDSSRKA-------ARFVRFCDAFNIPVVTFVDVPGFLPGTTQEYGGIIKHGAKL 382          
BLAST of mRNA_Ecto-sp13_S_contig17932.5471.1 vs. uniprot
Match: A0A849KBD3_9BURK (Acyl-CoA carboxylase subunit beta n=4 Tax=Comamonadaceae TaxID=80864 RepID=A0A849KBD3_9BURK)

HSP 1 Score: 192 bits (488), Expect = 4.650e-56
Identity = 90/139 (64.75%), Postives = 113/139 (81.29%), Query Frame = 0
Query:    4 EKPPVRKTSDFRDRVDESLRYLLPQDSNVPYDMKHVVSKVVDDNTYFEIMPDWARNITVGFARMEGHPVGIVANNPMFLAGCLDIDSSTKAKVQRKQAARFVRFCDAFNIPLLTFVDVPGFLPGTAQEHGGIIRHGSKV 142
            EKPPVR ++D  DR+D SL  L+P ++N PYDMK +++K VDD  +FE+ PD+A+NI +GFARMEG  VGIVANNP+ LAGCLDI SS KA       ARFVRFCDAFNIP++TFVDVPGF+PGT+QE+GGII+HG+K+
Sbjct:  273 EKPPVRPSNDPADRMDFSLDTLIPDNANKPYDMKELITKTVDDGDFFELQPDYAKNIVIGFARMEGQSVGIVANNPLVLAGCLDIKSSIKA-------ARFVRFCDAFNIPVITFVDVPGFMPGTSQEYGGIIKHGAKL 404          
BLAST of mRNA_Ecto-sp13_S_contig17932.5471.1 vs. uniprot
Match: A0A6J4FDQ3_9PROT (Propionyl-CoA carboxylase beta chain n=23 Tax=Rhodospirillaceae TaxID=41295 RepID=A0A6J4FDQ3_9PROT)

HSP 1 Score: 192 bits (487), Expect = 4.710e-56
Identity = 93/139 (66.91%), Postives = 111/139 (79.86%), Query Frame = 0
Query:    4 EKPPVRKTSDFRDRVDESLRYLLPQDSNVPYDMKHVVSKVVDDNTYFEIMPDWARNITVGFARMEGHPVGIVANNPMFLAGCLDIDSSTKAKVQRKQAARFVRFCDAFNIPLLTFVDVPGFLPGTAQEHGGIIRHGSKV 142
            EKPPVR T+D  DR++ SL  L+P ++N PYDMK ++ KVVD+  +FE+ P +A NI VGFARMEG  VGIVAN PM LAGCLDIDSS KA       ARFVRFCDAFNIP++TFVDVPGFLPGTAQE+GGII+HG+K+
Sbjct:  256 EKPPVRPTADAADRIEMSLDTLIPDNANKPYDMKELILKVVDEGDFFEVQPGYAGNIVVGFARMEGASVGIVANQPMVLAGCLDIDSSIKA-------ARFVRFCDAFNIPVVTFVDVPGFLPGTAQEYGGIIKHGAKL 387          
BLAST of mRNA_Ecto-sp13_S_contig17932.5471.1 vs. uniprot
Match: A0A2S6SQK5_9PROT (Propionyl-CoA carboxylase beta chain n=3 Tax=Alphaproteobacteria TaxID=28211 RepID=A0A2S6SQK5_9PROT)

HSP 1 Score: 191 bits (485), Expect = 8.420e-56
Identity = 90/141 (63.83%), Postives = 113/141 (80.14%), Query Frame = 0
Query:    2 YTEKPPVRKTSDFRDRVDESLRYLLPQDSNVPYDMKHVVSKVVDDNTYFEIMPDWARNITVGFARMEGHPVGIVANNPMFLAGCLDIDSSTKAKVQRKQAARFVRFCDAFNIPLLTFVDVPGFLPGTAQEHGGIIRHGSKV 142
            + EKPPV KT+D  DRV++SL  ++P++SN PYDMK V+ KV+D+  +FEI  ++A+NI  GFAR++G PVGIVAN P+ LAGCLDIDSS KA       ARFVRFCD FNIP++TFVDVPGFLPGT QE+GGII+HGSK+
Sbjct:  249 FREKPPVIKTNDKSDRVEKSLNTIVPKNSNKPYDMKEVIYKVIDNEDFFEIQENYAKNIITGFARIDGQPVGIVANQPLVLAGCLDIDSSRKA-------ARFVRFCDCFNIPIITFVDVPGFLPGTKQEYGGIIKHGSKL 382          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig17932.5471.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KY11_9PHAE1.420e-8594.96Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
UPI0019C7457C1.010e-5765.47Acyl-CoA carboxylase subunit beta n=1 Tax=Pseudorh... [more]
A0A836CAR6_9STRA3.490e-5766.91Propionyl-CoA carboxylase beta chain mitochondrial... [more]
A0A520D1F2_9BURK3.740e-5764.03Acyl-CoA carboxylase subunit beta (Fragment) n=1 T... [more]
A0A1E5QA07_9PROT7.780e-5766.91Methylmalonyl-CoA carboxyltransferase n=1 Tax=Magn... [more]
A0A523NTV8_9PROT1.090e-5665.00Acyl-CoA carboxylase subunit beta n=1 Tax=Proteoba... [more]
A0A0F2RAK7_9PROT2.160e-5666.91Methylmalonyl-CoA carboxyltransferase n=4 Tax=Rhod... [more]
A0A849KBD3_9BURK4.650e-5664.75Acyl-CoA carboxylase subunit beta n=4 Tax=Comamona... [more]
A0A6J4FDQ3_9PROT4.710e-5666.91Propionyl-CoA carboxylase beta chain n=23 Tax=Rhod... [more]
A0A2S6SQK5_9PROT8.420e-5663.83Propionyl-CoA carboxylase beta chain n=3 Tax=Alpha... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR034733Acetyl-CoA carboxylasePFAMPF01039Carboxyl_transcoord: 4..142
e-value: 2.2E-48
score: 165.1
NoneNo IPR availableGENE3D3.90.226.10coord: 8..145
e-value: 2.7E-41
score: 143.6
NoneNo IPR availablePANTHERPTHR43842FAMILY NOT NAMEDcoord: 3..142
IPR011763Acetyl-coenzyme A carboxyltransferase, C-terminalPROSITEPS50989COA_CT_CTERcoord: 17..147
score: 26.058
IPR029045ClpP/crotonase-like domain superfamilySUPERFAMILY52096ClpP/crotonasecoord: 4..143

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig17932contigEcto-sp13_S_contig17932:527..2099 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig17932.5471.1mRNA_Ecto-sp13_S_contig17932.5471.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig17932 527..2099 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig17932.5471.1 ID=prot_Ecto-sp13_S_contig17932.5471.1|Name=mRNA_Ecto-sp13_S_contig17932.5471.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=148bp
MYTEKPPVRKTSDFRDRVDESLRYLLPQDSNVPYDMKHVVSKVVDDNTYF
EIMPDWARNITVGFARMEGHPVGIVANNPMFLAGCLDIDSSTKAKVQRKQ
AARFVRFCDAFNIPLLTFVDVPGFLPGTAQEHGGIIRHGSKVGVRCR*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR034733AcCoA_carboxyl
IPR011763COA_CT_C
IPR029045ClpP/crotonase-like_dom_sf