mRNA_Ecto-sp13_S_contig17925.5469.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp13_S_contig17925.5469.1
Unique NamemRNA_Ecto-sp13_S_contig17925.5469.1
TypemRNA
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Homology
BLAST of mRNA_Ecto-sp13_S_contig17925.5469.1 vs. uniprot
Match: A0A6H5JQ17_9PHAE (PB1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JQ17_9PHAE)

HSP 1 Score: 653 bits (1684), Expect = 3.030e-227
Identity = 389/487 (79.88%), Postives = 406/487 (83.37%), Query Frame = 2
Query:  299 MNTIEHNKN--REENDKTMTTSSIKINFQGASRDVSVPAPVSLASLQAAIAAAFDVDLPARSAAGEAGEDTDLSFTYKDPDGDDIVFDKDSELKLAVRLCPSSLEISATLKESKPANKPDSEARLFKIAARNLREYNGVPSMTPPKLVKTLAFLKLNPQHLVKQGLAPKVLLAGMKAEAASNAKVSKVPLGDGKNNEDLAESVAADMELMSVEDDKKEWNDGFVSAESDASAAAAPITAETSTPXXXXXXXXDDAEPEVKKNLIHKAFTAGGIQLRPREVRPLLVALDVRPCRLARLGLVNGKDLRAMLQAEKKAAHKRHGHGNXXXXXXXXXXXXXXXXXXXXXXXXMAGRPHPFAPXXXXXXXHQEVGDAMFAARGGRGRHGSXXXXXXXXX------------MKRMMHGARSHPVAXXXXXXXXENHDDAPGGRGGGRCGGPLFHPAHQHYAEMFDEDEGGRPGVYPHHGPPRWMAIHRAHGG 1717
            MN I HN N  R  NDKTMTT SIKINFQGASRDV+VPAPVSLASLQAAIAAAFD +LP RS AGEA +DTDLSFTYKDPDGDDIVFDKDSELKLAVRLCPSSLEISATLKES+PA KPD EARL+KIAARNLREYNGVPSMT PKL+KTLAFLKLNPQ LVKQGLAPKVLLA MKAEAA+NAKVSKVPLGDGKNNEDLAESVAA MELMSVEDDKKEWNDGFVSAESDASAAA PITA+TSTP        +DA PE KK+LIHKAF  GGIQLRPREVRPLLVALDVRPCRLA+LGLV+GKDLRAML+AEKKAAHKR  HGN XXXXXXXXXXXXXXX XXXXX  MAGRPHPFAP       HQEVGDAMFAARGGRGRHGS  XXXXXXX            MK MM G R     XXXX    E+  DAPGG GGG  G PLFHP HQHYAE+FDEDE G PGV+PHHGPPRWMAI  +HGG
Sbjct:    1 MNAINHNNNNNRYNNDKTMTTPSIKINFQGASRDVNVPAPVSLASLQAAIAAAFDAELPVRSPAGEAAKDTDLSFTYKDPDGDDIVFDKDSELKLAVRLCPSSLEISATLKESEPAKKPDPEARLYKIAARNLREYNGVPSMTAPKLIKTLAFLKLNPQRLVKQGLAPKVLLARMKAEAANNAKVSKVPLGDGKNNEDLAESVAAGMELMSVEDDKKEWNDGFVSAESDASAAAVPITAKTSTPDNDNEEENNDAAPETKKDLIHKAFITGGIQLRPREVRPLLVALDVRPCRLAKLGLVDGKDLRAMLRAEKKAAHKRCDHGNNXXXXXXXXXXXXXXXDXXXXXHRMAGRPHPFAPPPPSPPAHQEVGDAMFAARGGRGRHGSPHXXXXXXXXXXXXXXXXPPPMKGMMRGGRXXXXXXXXXPAHMEDPGDAPGGGGGGHRGVPLFHPVHQHYAEVFDEDERGHPGVHPHHGPPRWMAIRNSHGG 487          
BLAST of mRNA_Ecto-sp13_S_contig17925.5469.1 vs. uniprot
Match: A0A6H5KB69_9PHAE (PB1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KB69_9PHAE)

HSP 1 Score: 541 bits (1393), Expect = 7.370e-183
Identity = 339/517 (65.57%), Postives = 357/517 (69.05%), Query Frame = 2
Query:  347 MTTSSIKINFQGASRDVSVPAPVSLASLQAAIAAAFDVDLPARSAAGEAGEDTDLSFTYKDPDGDDIVFDKDSELKLAVRLCPSSLEISATLKESKPANKPDSEARLFKIAARNLREYNGVPSMTPPKLVKTLAFLKLNPQHLVKQGLAPKVLLAGMKAEAASNAKVSKVPLGDGKNNEDLAESVAADMELMSVEDDKKEWNDGFVSAESDASAAAAPITAETSTPXXXXXXXXDDAEPEVKKNLIHKAFTAGGIQLRPREVRPLLVALDVRPCRLARLGLVNGKDLRAMLQAEKKAAHKRHGHGNXXXXXXXXXXXXXXXXXXXXXXXXMAGRPHPFAPXXXXXXX--------------------------------------------HQEVGDAMFAARGGRGRHGSXXXXXXXXX--MKRMMHGARSHPVAXXXXXXXXENHDDAPGGRGGG--------------RCGGPLFHPAHQHYAEMFDEDEGGRPGVYPHHGPPRWMAIHRAHGG 1717
            MTTSSIKINFQG SR+V+V AP +LASLQA IAAAFD +LP RS AGEA +DTDLSFTYKDPDGDDIVFDKDSEL LAVRLCP SLEISA  KE+KP NKPD E RL+KIAARNLREYNGVPSMT PKL+KTLAFLKLNP+ LVKQGLAPK LLA MKAEAA+N KVSKV LGDG+NNEDLAESVAA MELMSVEDDKKE N+GFVSA+ DASAAA PITA+TS+P        DDA PEVKKNLIH AF AGGIQLRPREVRPLLVALDVRP RLA+LGLVNGK LRAMLQAE KAAHKRHGH N            XXX         M  RPHPFAP XXXXXX                                            HQEVGDAMFAARGG GRH  XXXXXXXXX  MKR M G R    A       X      P                    R GGPLFHPAHQHY E+FDED GG PG  P+HGPPRWMAI RAHGG
Sbjct:    1 MTTSSIKINFQGTSRNVNVQAPFTLASLQATIAAAFDAELPVRSPAGEATKDTDLSFTYKDPDGDDIVFDKDSELNLAVRLCPDSLEISAAGKENKPDNKPDPEGRLYKIAARNLREYNGVPSMTAPKLIKTLAFLKLNPRRLVKQGLAPKNLLARMKAEAANNMKVSKVTLGDGENNEDLAESVAAGMELMSVEDDKKECNNGFVSAKPDASAAAVPITAKTSSPDNDNEEENDDAAPEVKKNLIHTAFIAGGIQLRPREVRPLLVALDVRPWRLAKLGLVNGKYLRAMLQAETKAAHKRHGHDNNNDDTAALHHRRXXXRDYHRQQHRMTSRPHPFAPPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPPSAHQEVGDAMFAARGG-GRHXXXXXXXXXXXXXMKRTMRGGRPQRFAPPRPSRSXXXXXXXPXXXXXXXXXXXXXXXXXXVDRRGGPLFHPAHQHYTEVFDEDGGGHPGFRPYHGPPRWMAIRRAHGG 516          
BLAST of mRNA_Ecto-sp13_S_contig17925.5469.1 vs. uniprot
Match: D8LN68_ECTSI (PB1 domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LN68_ECTSI)

HSP 1 Score: 535 bits (1379), Expect = 2.480e-181
Identity = 354/479 (73.90%), Postives = 368/479 (76.83%), Query Frame = 2
Query:  347 MTTSSIKINFQGASRDVSVPAPVSLASLQAAIAAAFDVDLPARSAAGEAGEDTDLSFTYKDPDGDDIVFDKDSELKLAVRLCPSSLEISATLKESKPANKPDSEARLFKIAARNLREYNGVPSMTPPKLVKTLAFLKLNPQHLVKQGLAPKVLLAGMKAEAASNAKVSKVPLGDGKNNEDLAESVAADMELMSVEDDKKEWNDGFVSAESDASAAAAPITAETSTPXXXXXXXXDDAEPEVKKNLIHKAFTAGGIQLRPREVRPLLVALDVRPCRLARLGLVNGKDLRAMLQAEKKAAHKRHGHGNXXXXXXXXXXXXXXXXXXXXXXXXMAGRPHPFAPXXXXXXXHQEVGDAMFAARGGRG---RHGSXXXXXXXXX-------------------MKRMMHGARSHPVAXXXXXXXXENHDDAPGGRGGGRCGGPLFHPAHQHYAEMFDEDEGGRPGVYPHHGPPRWMAIHRAHGG 1717
            MTTSSIKINFQG SRDV+VP PV+LASLQAAIA AFD +LP RS AGEA +DTDLSFTYKDPDGDDIVFDKDSEL LAVRLCP SLEISA  KE+KPANKPD EARL+KIAARNLREYNGVPSMTP KLVKTLAFL+LNPQ LVKQGLAPKVLLA MKAEAA+NAKVSKVPLGDGKNNEDLAESVAA MELMSVEDDKKEWNDGFVS E           A+TS+P        D   PEVKKNLIHKAF AGGIQLRPREVRPLLVALDVRPCRLA+LGLVNGKDLRAMLQAEKK AHKR GH  XXXXXXXXXXXXXXXXXXXXXXXXMAGRPHPFA XXXXXXX                   RHG+  XXXXXXX                   MKRMM         XXXXXXXXE              GGPLFHPAHQHYAE+FDEDEGG PG +PHHGPPRWMAI RAHGG
Sbjct:    1 MTTSSIKINFQGTSRDVNVPVPVTLASLQAAIAGAFDAELPVRSPAGEAAKDTDLSFTYKDPDGDDIVFDKDSELNLAVRLCPGSLEISAAGKENKPANKPDPEARLYKIAARNLREYNGVPSMTPLKLVKTLAFLELNPQRLVKQGLAPKVLLARMKAEAANNAKVSKVPLGDGKNNEDLAESVAAGMELMSVEDDKKEWNDGFVSVE----------PADTSSPGNDNEEKNDAVAPEVKKNLIHKAFIAGGIQLRPREVRPLLVALDVRPCRLAKLGLVNGKDLRAMLQAEKKVAHKRRGHDXXXXXXXXXXXXXXXXXXXXXXXXXMAGRPHPFAXXXXXXXXXXXXXXXXXXXXXXXXXXXRHGAPHXXXXXXXXXXXXXXXGAPHXXXXXPPMKRMMXXXXXXXXXXXXXXXXXEXXXXXXXXXXXXXXGGPLFHPAHQHYAEVFDEDEGGHPGFHPHHGPPRWMAIRRAHGG 469          
BLAST of mRNA_Ecto-sp13_S_contig17925.5469.1 vs. uniprot
Match: D8LN66_ECTSI (PB1 domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LN66_ECTSI)

HSP 1 Score: 481 bits (1238), Expect = 4.980e-161
Identity = 260/322 (80.75%), Postives = 275/322 (85.40%), Query Frame = 2
Query:  299 MNTIEHNKNREENDKTMTTSSIKINFQGASRDVSVPAPVSLASLQAAIAAAFDVDLPARSAAGEAGEDTDLSFTYKDPDGDDIVFDKDSELKLAVRLCPSSLEISATLKESKPANKPDSEARLFKIAARNLREYNGVPSMTPPKLVKTLAFLKLNPQHLVKQGLAPKVLLAGMKAEAASNAKVSKVPLGDGKNNEDLAESVAADMELMSVEDDKKEWNDGFVSAESDASAAAAPITAETSTPXXXXXXXXDDAEPEVKKNLIHKAFTAGGIQLRPREVRPLLVALDVRPCRLARLGLVNGKDLRAMLQAEKKAAHKRHGHGN 1264
            MNTI+HN NR+ ND TMTTSSIKINFQGASRDV+VPAPV+LASLQA IAAAFD +LP RS  GEA +DTDLSFTYKDPDGDDIVFDKDSELKLA+RLCP SLEISA  KE K A  PDSEARL+KIAARNLREYNGVPSMTPPKLVKTLAFLKLNPQ LVKQGLAPK LL  MKAEAA+NAKVSKVPLGDGKNNEDLAESVAA MELMS+EDDKKEWNDGFVS E           A+TS+P        D   PEVKKNLIHKAF AGGIQLRPREVRPLLVALDVRPCRLA+LGLV+GKDLRAMLQAEKK AHKRHG G+
Sbjct:    1 MNTIKHNNNRDNNDNTMTTSSIKINFQGASRDVNVPAPVTLASLQAVIAAAFDAELPVRSPGGEAAKDTDLSFTYKDPDGDDIVFDKDSELKLAMRLCPGSLEISAAGKEKKAAEMPDSEARLYKIAARNLREYNGVPSMTPPKLVKTLAFLKLNPQRLVKQGLAPKNLLPRMKAEAANNAKVSKVPLGDGKNNEDLAESVAAGMELMSLEDDKKEWNDGFVSVE----------PADTSSPDNDNEEKNDAVAPEVKKNLIHKAFIAGGIQLRPREVRPLLVALDVRPCRLAKLGLVDGKDLRAMLQAEKKTAHKRHGPGH 312          
BLAST of mRNA_Ecto-sp13_S_contig17925.5469.1 vs. uniprot
Match: A0A6H5KAY7_9PHAE (PB1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KAY7_9PHAE)

HSP 1 Score: 465 bits (1196), Expect = 1.200e-154
Identity = 259/333 (77.78%), Postives = 277/333 (83.18%), Query Frame = 2
Query:  269 CPSAPQLTTSMNTIEHNKN-REENDKTMTTSSIKINFQGASRDVSVPAPVSLASLQAAIAAAFDVDLPARSAAGEAGEDTDLSFTYKDPDGDDIVFDKDSELKLAVRLCPSSLEISATLKESKPANKPDSEARLFKIAARNLREYNGVPSMTPPKLVKTLAFLKLNPQHLVKQGLAPKVLLAGMKAEAASNAKVSKVPLGDGKNNEDLAESVAADMELMSVEDDKKEWNDGFVSAESDASAAAAPITAETSTPXXXXXXXXDDAEPEVKKNLIHKAFTAGGIQLRPREVRPLLVALDVRPCRLARLGLVNGKDLRAMLQAEKKAAHKRHGHGN 1264
            CPS  QLT S NTI++N+N R  NDKTMTTSSIKINFQGASRDVSVPAP +LA LQAAIAA F+V+LP RS  GEA +DTDLSFTYKDPDGDDIVFDKDSEL LA+RLCP SLEISA  KE+K    PDSE  L+KIAARNLREYNGVPSMTPPKLVKTLAFLKLNPQ LVKQGLAPK+LLA MKAE A+NAK+SKV LGDGKNNEDLAE VAA ME MSVEDDKKEWNDGFVS E           AETS+         DDA PEVK+NLIHKAF AGGIQLRPREVRPLLVALDVRP RLA+LGLV+GKDLRAMLQAEKKAAHKRHG G+
Sbjct:    2 CPSPTQLT-SKNTIKYNRNNRYNNDKTMTTSSIKINFQGASRDVSVPAPATLARLQAAIAAVFEVELPVRSLTGEAAKDTDLSFTYKDPDGDDIVFDKDSELNLALRLCPGSLEISAAGKENKATKMPDSEETLYKIAARNLREYNGVPSMTPPKLVKTLAFLKLNPQRLVKQGLAPKMLLARMKAETANNAKLSKVRLGDGKNNEDLAEWVAAGMEFMSVEDDKKEWNDGFVSVE----------PAETSSSDNGNEEENDDAAPEVKQNLIHKAFIAGGIQLRPREVRPLLVALDVRPWRLAKLGLVDGKDLRAMLQAEKKAAHKRHGPGH 323          
BLAST of mRNA_Ecto-sp13_S_contig17925.5469.1 vs. uniprot
Match: D8LN82_ECTSI (PB1 domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LN82_ECTSI)

HSP 1 Score: 440 bits (1131), Expect = 9.340e-147
Identity = 243/287 (84.67%), Postives = 256/287 (89.20%), Query Frame = 2
Query:  299 MNTIEHNKNREENDKTMTTSSIKINFQGASRDVSVPAPVSLASLQAAIAAAFDVDLPARSAAGEAGEDTDLSFTYKDPDGDDIVFDKDSELKLAVRLCPSSLEISATLKESKPANKPDSEARLFKIAARNLREYNGVPSMTPPKLVKTLAFLKLNPQHLVKQGLAPKVLLAGMKAEAASNAKVSKVPLGDGKNNEDLAESVAADMELMSVEDDKKEWNDGFVSAESDASAAAAPITAETSTPXXXXXXXXDDAEPEVKKNLIHKAFTAGGIQLRPREVRPLLVALDV 1159
            MNTI+HN N + NDK MTTSSIKINFQGASRDV+VPAPV+L SLQAAIAAAFD +LP RS AGEA +DTDLSFTYKDPDGDDIVFDKDSELKLAVRLCPSSLEISA LKESKPANKPD EARL+KIAARNLREYNGVPSMTPPKL+KTLAFLKLNPQ LVKQGLAPKVLLA MKAEAA+NAKVSKVPLGDGKNNEDLA+SVAA MELMSVED KKEWNDGFVSAESDA AAAAPITAETS+P        DDA PEVKKNLIHKAF AGGIQLRPRE   L V++ V
Sbjct:    1 MNTIKHN-NCDNNDKMMTTSSIKINFQGASRDVNVPAPVTLDSLQAAIAAAFDAELPVRSPAGEAAKDTDLSFTYKDPDGDDIVFDKDSELKLAVRLCPSSLEISAALKESKPANKPDPEARLYKIAARNLREYNGVPSMTPPKLIKTLAFLKLNPQRLVKQGLAPKVLLARMKAEAANNAKVSKVPLGDGKNNEDLADSVAAGMELMSVED-KKEWNDGFVSAESDAPAAAAPITAETSSPDNDKEEENDDAAPEVKKNLIHKAFIAGGIQLRPREGLLLGVSIFV 285          
BLAST of mRNA_Ecto-sp13_S_contig17925.5469.1 vs. uniprot
Match: A0A6H5JPU3_9PHAE (PB1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JPU3_9PHAE)

HSP 1 Score: 443 bits (1139), Expect = 4.730e-146
Identity = 251/324 (77.47%), Postives = 265/324 (81.79%), Query Frame = 2
Query:  299 MNTIEHNKNREENDK--TMTTSSIKINFQGASRDVSVPAPVSLASLQAAIAAAFDVDLPARSAAGEAGEDTDLSFTYKDPDGDDIVFDKDSELKLAVRLCPSSLEISATLKESKPANKPDSEARLFKIAARNLREYNGVPSMTPPKLVKTLAFLKLNPQHLVKQGLAPKVLLAGMKAEAASNAKVSKVPLGDGKNNEDLAESVAADMELMSVEDDKKEWNDGFVSAESDASAAAAPITAETSTPXXXXXXXXDDAEPEVKKNLIHKAFTAGGIQLRPREVRPLLVALDVRPCRLARLGLVNGKDLRAMLQAEKKAAHKRHGHGN 1264
            MNTI HN          TMTTSSIKI FQGASRDV+V  PV LASLQAAIAAAFDV+LPARS+AGEA  DTDLSFTYKDPDGDDIVFDK+SEL+LA+RLCP SLEISA  KE+K    PDSE +L+KIAARNLREYNGVPSMTPPKLVKTLAFLKLNPQ LVKQGLAPKVLLA MKAEAA+NAKVSKVPLGDGKNNEDLAESVAA MELMSVED KKEWNDGFVS E           AE S P        +DA PE KKNLIHKAF AGGIQLRPREVRPLLVALDV P RLA+LGLV GKDLRAML+AEKK AHKRHG G+
Sbjct:    1 MNTINHNXXXXXXXXXXTMTTSSIKITFQGASRDVNVRVPVMLASLQAAIAAAFDVELPARSSAGEAANDTDLSFTYKDPDGDDIVFDKESELQLALRLCPGSLEISAAGKENKATRMPDSEEKLYKIAARNLREYNGVPSMTPPKLVKTLAFLKLNPQRLVKQGLAPKVLLARMKAEAANNAKVSKVPLGDGKNNEDLAESVAAGMELMSVEDGKKEWNDGFVSVE----------PAEISFPANDNEEK-NDAAPEAKKNLIHKAFIAGGIQLRPREVRPLLVALDVLPYRLAKLGLVGGKDLRAMLRAEKKTAHKRHGPGH 313          
BLAST of mRNA_Ecto-sp13_S_contig17925.5469.1 vs. uniprot
Match: A0A6H5JCG1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JCG1_9PHAE)

HSP 1 Score: 79.0 bits (193), Expect = 9.270e-12
Identity = 65/174 (37.36%), Postives = 80/174 (45.98%), Query Frame = 2
Query:  629 SKPANKPDSEAR--LFKIAARNLREYNGVPSMTPPKLVKTLAFLKLNPQHLVKQGLAPKVLLAGMKAEAASNAKVSKVPLGDGKNNEDLAESVAADMELMSVEDDKKEWNDGFVSAESDASAAAAPITAETSTPXXXXXXXXDDAEPEVKKNLIHKAFTAGGIQLRPREVRPLL 1144
            SKP+ K   E    +FK AARNLREY+GVPS+TP  L  T+  L+L P  LV QGLAPK+LL G  + A  +A  +    G     E      + D+   S  D     ND  V+  S    A A                         K+ I   F A G+QLRPRE RPLL
Sbjct:   27 SKPSCKRTGEPNPLMFKAAARNLREYHGVPSITPGGLETTMVLLELRPARLVAQGLAPKILLKG-NSTAGVDADSTDGSGGFEAEEEQANNQFSHDLSSNSS-DGGDTGNDNIVTQNSIGFEARA------------------------SKHPIQAVFVAVGVQLRPRETRPLL 174          
BLAST of mRNA_Ecto-sp13_S_contig17925.5469.1 vs. uniprot
Match: A0A6H5K3J2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K3J2_9PHAE)

HSP 1 Score: 77.0 bits (188), Expect = 1.160e-11
Identity = 59/160 (36.88%), Postives = 71/160 (44.38%), Query Frame = 2
Query:  665 LFKIAARNLREYNGVPSMTPPKLVKTLAFLKLNPQHLVKQGLAPKVLLAGMKAEAASNAKVSKVPLGDGKNNEDLAESVAADMELMSVEDDKKEWNDGFVSAESDASAAAAPITAETSTPXXXXXXXXDDAEPEVKKNLIHKAFTAGGIQLRPREVRPLL 1144
            L+K AARNL EY+GVPSMT   L KT+  L+L P  LV QGLAPK LL G  A   +                ++    A + +   V DD    +      E D  A    I                D E    K+ IH  F A G+QLRPRE RPLL
Sbjct:   51 LYKAAARNLCEYHGVPSMTAGGLEKTMVLLQLRPGRLVAQGLAPKQLLEGKSAAGDAXXXXXXXXXXXXXXXXEVDPEQADNNQ---VSDDSNTNSRDGTDIEHDHVATQDSI----------------DIETGASKHPIHAVFVAAGVQLRPRETRPLL 191          
BLAST of mRNA_Ecto-sp13_S_contig17925.5469.1 vs. uniprot
Match: A0A6H5KBH6_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KBH6_9PHAE)

HSP 1 Score: 63.2 bits (152), Expect = 1.140e-7
Identity = 34/64 (53.12%), Postives = 42/64 (65.62%), Query Frame = 2
Query:  650 DSEARLFKIAARNLREYNGVPSMTPPKLVKTLAFLKLNPQHLVKQGLAPKVLLAGMKAEAASNA 841
            +S   L+K AARNLREY+GVPS+T   L KT+  L+L P  LV QGLAPK  L G  A   ++A
Sbjct:   52 ESNPLLYKAAARNLREYHGVPSITVGGLEKTMVLLQLRPGRLVAQGLAPKQFLEGKSAADDADA 115          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig17925.5469.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 14
Match NameE-valueIdentityDescription
A0A6H5JQ17_9PHAE3.030e-22779.88PB1 domain-containing protein n=1 Tax=Ectocarpus s... [more]
A0A6H5KB69_9PHAE7.370e-18365.57PB1 domain-containing protein n=1 Tax=Ectocarpus s... [more]
D8LN68_ECTSI2.480e-18173.90PB1 domain-containing protein n=1 Tax=Ectocarpus s... [more]
D8LN66_ECTSI4.980e-16180.75PB1 domain-containing protein n=1 Tax=Ectocarpus s... [more]
A0A6H5KAY7_9PHAE1.200e-15477.78PB1 domain-containing protein n=1 Tax=Ectocarpus s... [more]
D8LN82_ECTSI9.340e-14784.67PB1 domain-containing protein n=1 Tax=Ectocarpus s... [more]
A0A6H5JPU3_9PHAE4.730e-14677.47PB1 domain-containing protein n=1 Tax=Ectocarpus s... [more]
A0A6H5JCG1_9PHAE9.270e-1237.36Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5K3J2_9PHAE1.160e-1136.88Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KBH6_9PHAE1.140e-753.13Uncharacterized protein (Fragment) n=1 Tax=Ectocar... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig17925contigEcto-sp13_S_contig17925:2..3178 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Model size2212
Hectar predicted targeting categoryother localisation
Exons2
Cds size1623
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681462928.0453906-UTR-Ecto-sp13_S_contig17925:1..1611681462928.0453906-UTR-Ecto-sp13_S_contig17925:1..161Ectocarpus species13 EcNAP12_S_4_19mUTREcto-sp13_S_contig17925 2..161 +
1681462928.0740998-UTR-Ecto-sp13_S_contig17925:2749..31781681462928.0740998-UTR-Ecto-sp13_S_contig17925:2749..3178Ectocarpus species13 EcNAP12_S_4_19mUTREcto-sp13_S_contig17925 2750..3178 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681462928.0565069-CDS-Ecto-sp13_S_contig17925:161..6351681462928.0565069-CDS-Ecto-sp13_S_contig17925:161..635Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig17925 162..635 +
1681462928.0656695-CDS-Ecto-sp13_S_contig17925:1600..27491681462928.0656695-CDS-Ecto-sp13_S_contig17925:1600..2749Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig17925 1601..2749 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig17925.5469.1prot_Ecto-sp13_S_contig17925.5469.1Ectocarpus species13 EcNAP12_S_4_19mpolypeptideEcto-sp13_S_contig17925 162..2749 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp13_S_contig17925.5469.1

>prot_Ecto-sp13_S_contig17925.5469.1 ID=prot_Ecto-sp13_S_contig17925.5469.1|Name=mRNA_Ecto-sp13_S_contig17925.5469.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=541bp
MKHSRDGPPESFFRIVLWILGEHGEPGFLEALSLCTCPSAPQLTTSMNTI
EHNKNREENDKTMTTSSIKINFQGASRDVSVPAPVSLASLQAAIAAAFDV
DLPARSAAGEAGEDTDLSFTYKDPDGDDIVFDKDSELKLAVRLCPSSLEI
SATLKESKPANKPDSEARLFKIAARNLREYNGVPSMTPPKLVKTLAFLKL
NPQHLVKQGLAPKVLLAGMKAEAASNAKVSKVPLGDGKNNEDLAESVAAD
MELMSVEDDKKEWNDGFVSAESDASAAAAPITAETSTPDNDDEEENDDAE
PEVKKNLIHKAFTAGGIQLRPREVRPLLVALDVRPCRLARLGLVNGKDLR
AMLQAEKKAAHKRHGHGNNNDDTAALHHRRHHHRDYHRQQHRMAGRPHPF
APPPPPPPAHQEVGDAMFAARGGRGRHGSPHHHVPPPPMKRMMHGARSHP
VAPPPPPAHMENHDDAPGGRGGGRCGGPLFHPAHQHYAEMFDEDEGGRPG
VYPHHGPPRWMAIHRAHGGGDGGGYGGGVGQQQRRDYYWG*
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mRNA from alignment at Ecto-sp13_S_contig17925:2..3178+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp13_S_contig17925.5469.1 ID=mRNA_Ecto-sp13_S_contig17925.5469.1|Name=mRNA_Ecto-sp13_S_contig17925.5469.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=3177bp|location=Sequence derived from alignment at Ecto-sp13_S_contig17925:2..3178+ (Ectocarpus species13 EcNAP12_S_4_19m)
AAGAGCTCGTCGAAGTCACTAGTGCACAATCAATGCTGTCCGGATATTGA CACATGCGCCCGCGGAGCAGCAGAAGACGGCCGACTCATTGCCAGGTTGC GAGCCTCGCGTCATCTTCTCGCTGCGGCAATTCGAACATTCGAACTAGGT TCTTGAAGGCATGAAACATTCGAGAGACGGACCACCGGAATCGTTCTTCA GAATCGTTCTTTGGATTCTTGGGGAACATGGAGAACCTGGTTTTCTAGAA GCTCTCTCGCTCTGCACGTGCCCTTCCGCCCCACAGCTCACAACCTCCAT GAACACCATCGAACACAACAAAAACCGCGAAGAAAACGACAAGACGATGA CCACCTCTTCCATCAAGATCAACTTCCAGGGCGCTTCACGCGACGTGAGC GTTCCGGCTCCGGTTTCGCTCGCCAGCCTCCAAGCGGCCATCGCCGCTGC CTTCGATGTAGACCTGCCTGCCCGCTCCGCCGCGGGTGAGGCCGGCGAGG ACACCGACCTGTCCTTCACTTACAAGGATCCTGACGGGGACGACATCGTG TTCGACAAGGATTCCGAGCTAAAGCTGGCCGTGCGCCTATGCCCCAGCTC GCTCGAAATCTCGGCTACCCTGAAGGAAAGCAAGGTGAGCGAATACAGGC AGAAGATGTTTGCTCTTTTTCCAAGGAGGGGAAAAAATCACACGGTGTAG CCGAGGGTGAGTCTTCCGCGAGCGGTCACGCGTTCTCGTAGGCAGGATTC GATACCGTCGCGGGTAACTAGTCGTGCTACGATACTCCCGTGGTCGGGCT GCCCCGTTCATTGTAGAGAATATCATTTTTTTGGTTGCTTCTTAGCTGGG CGAGACATACGTACTGCTCTACTGCTGTAGTAGATGTAGACGGGGTTCTC GCGGCCCCGAAATGTCGGGTGATCTCTCTAATGATCTCTCTCGCTCTCGC CCTCTCCCTTGGTCGCCGTATCGACCTTTGCCGTCTGACTTACACCACAT ACCGAGCTATCATTGATCATATGGTACCACCCGGTACGATATGTGGCGAT TGTCTCCATCGTCGACTGCCTTCAGAACTCGATGAAATCGGTCTGACCCG AGCGTAGGAAAGAGAAACACGTGCACTTCTGTACACGAGTACACTGCTAC ACTTCTGCTGTACTGCTCCGTTTTCTTCTGTACACAAGCAGCGGTGTAGA GGTTACATACCTACAGCAGTAGTCCTGGCCCTGCCAGAGCCAGGACAGTA AAAAAATAACCACACAAAACAACCACCGATATAATATCTCCAAATCCCCC CAAATGTCACATTTTTGCCAACGTTGAACGTTGAACCGCCCTCTTCTGAT TGTTCAGAGACTGTCATCAACGCCTTCTCTGTTAGACGAATGCCTTTGAC CTGAATGTTTTATTTTCGGTGCCGGCAATTACGAGTCGAAACCTTGTCGT TCTTGATGTGTCCAGAAGTTGGCCCCGTTTTACCTGCATCGCCAAGAAGT CCTTTTCCCCAACAACCGTACCCCCGCTCAATCCCCCCTTGCCTTTCCTT CCCCACCGCGTGCACCTCTCCCCGCTTCCCTCATTACATGCCACCTCAGC CTGCTAACAAGCCCGACTCCGAAGCGAGGCTGTTTAAGATCGCCGCCCGT AACCTGCGCGAGTACAACGGCGTGCCCTCGATGACCCCGCCCAAGCTCGT CAAGACCCTGGCTTTCCTCAAGCTGAACCCGCAACACCTCGTGAAGCAGG GCCTCGCCCCCAAGGTCCTTCTGGCTGGCATGAAGGCCGAAGCCGCCAGT AACGCCAAGGTATCGAAGGTTCCTCTTGGTGACGGCAAGAACAACGAGGA TCTCGCCGAGTCGGTCGCCGCCGACATGGAGCTGATGAGCGTGGAGGACG ACAAGAAGGAATGGAACGATGGCTTCGTGTCCGCCGAGTCGGACGCGTCT GCTGCCGCGGCGCCCATCACCGCAGAGACTTCCACCCCCGACAACGACGA CGAGGAGGAGAACGACGACGCTGAGCCTGAGGTCAAGAAAAACCTCATCC ACAAGGCCTTCACCGCCGGCGGCATCCAACTTCGCCCCCGCGAGGTCCGG CCCCTGCTCGTCGCCCTGGACGTCCGCCCCTGCCGGCTGGCGAGGCTCGG CCTCGTCAACGGCAAGGATCTCCGGGCCATGCTCCAAGCCGAGAAGAAGG CCGCCCACAAGCGTCACGGCCATGGCAACAACAACGATGACACCGCCGCC CTCCACCACCGCCGCCACCACCACCGCGACTACCACCGCCAGCAGCACCG CATGGCCGGCCGCCCTCACCCCTTCGCCCCGCCTCCGCCTCCCCCTCCGG CGCACCAGGAGGTCGGCGACGCCATGTTTGCGGCGCGCGGCGGGAGGGGG CGCCACGGTTCCCCGCACCACCACGTCCCGCCCCCTCCGATGAAGAGGAT GATGCACGGCGCCCGCTCCCACCCCGTCGCCCCCCCCCCTCCCCCGGCTC ACATGGAAAACCACGACGACGCGCCCGGTGGCAGAGGCGGTGGTCGCTGT GGTGGCCCTCTCTTTCACCCGGCGCACCAGCACTACGCGGAGATGTTCGA CGAGGATGAGGGAGGTCGCCCCGGTGTCTACCCCCACCATGGCCCTCCTC GCTGGATGGCGATCCACAGGGCTCACGGCGGTGGTGATGGCGGCGGCTAC GGTGGCGGTGTTGGCCAGCAGCAGCGCAGGGACTACTACTGGGGGTGAAG ATCTTCGTCACCGTCAAGCCAAAGGCGGAGGAGCGTAGCTGCCTACTACG GTTCTGCTCTTTGCGTCGCGTTTCGTGGCGCAAGAGTGAAGAACGGCATG AGAGTAGTTGAGTTGGTATATCCTTTGTCTTTCGGCACTATTTGCAATTG GGCAGAAGCCTCCCTCGGGAACACTGATACGAGGGGTGGAGAACGGAAGG TTTGAGTAGACCGAGAACCCTTCCACCGTTTGGCTTCTGCACTCATGCAG CACTACGATAGGCGTACATGCTCTATGCTCGAAACATTTTTCAACGCAAA ACCGTCTCGGTTTGGTTTGAGTTCGGCCTTTCGTGGTTTCCTTGTTTTCT TCGGTGCTCTCGTTGTTGAGGGAGTCGTTTGTGTTGCGTGTAAGTGTATA ATCGCTGTGCGACGCGGAGTAGCTGAT
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Coding sequence (CDS) from alignment at Ecto-sp13_S_contig17925:2..3178+

>mRNA_Ecto-sp13_S_contig17925.5469.1 ID=mRNA_Ecto-sp13_S_contig17925.5469.1|Name=mRNA_Ecto-sp13_S_contig17925.5469.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=1623bp|location=Sequence derived from alignment at Ecto-sp13_S_contig17925:2..3178+ (Ectocarpus species13 EcNAP12_S_4_19m)
ATGAAACATTCGAGAGACGGACCACCGGAATCGTTCTTCAGAATCGTTCT
TTGGATTCTTGGGGAACATGGAGAACCTGGTTTTCTAGAAGCTCTCTCGC
TCTGCACGTGCCCTTCCGCCCCACAGCTCACAACCTCCATGAACACCATC
GAACACAACAAAAACCGCGAAGAAAACGACAAGACGATGACCACCTCTTC
CATCAAGATCAACTTCCAGGGCGCTTCACGCGACGTGAGCGTTCCGGCTC
CGGTTTCGCTCGCCAGCCTCCAAGCGGCCATCGCCGCTGCCTTCGATGTA
GACCTGCCTGCCCGCTCCGCCGCGGGTGAGGCCGGCGAGGACACCGACCT
GTCCTTCACTTACAAGGATCCTGACGGGGACGACATCGTGTTCGACAAGG
ATTCCGAGCTAAAGCTGGCCGTGCGCCTATGCCCCAGCTCGCTCGAAATC
TCGGCTACCCTGAAGGAAAGCAAGCCTGCTAACAAGCCCGACTCCGAAGC
GAGGCTGTTTAAGATCGCCGCCCGTAACCTGCGCGAGTACAACGGCGTGC
CCTCGATGACCCCGCCCAAGCTCGTCAAGACCCTGGCTTTCCTCAAGCTG
AACCCGCAACACCTCGTGAAGCAGGGCCTCGCCCCCAAGGTCCTTCTGGC
TGGCATGAAGGCCGAAGCCGCCAGTAACGCCAAGGTATCGAAGGTTCCTC
TTGGTGACGGCAAGAACAACGAGGATCTCGCCGAGTCGGTCGCCGCCGAC
ATGGAGCTGATGAGCGTGGAGGACGACAAGAAGGAATGGAACGATGGCTT
CGTGTCCGCCGAGTCGGACGCGTCTGCTGCCGCGGCGCCCATCACCGCAG
AGACTTCCACCCCCGACAACGACGACGAGGAGGAGAACGACGACGCTGAG
CCTGAGGTCAAGAAAAACCTCATCCACAAGGCCTTCACCGCCGGCGGCAT
CCAACTTCGCCCCCGCGAGGTCCGGCCCCTGCTCGTCGCCCTGGACGTCC
GCCCCTGCCGGCTGGCGAGGCTCGGCCTCGTCAACGGCAAGGATCTCCGG
GCCATGCTCCAAGCCGAGAAGAAGGCCGCCCACAAGCGTCACGGCCATGG
CAACAACAACGATGACACCGCCGCCCTCCACCACCGCCGCCACCACCACC
GCGACTACCACCGCCAGCAGCACCGCATGGCCGGCCGCCCTCACCCCTTC
GCCCCGCCTCCGCCTCCCCCTCCGGCGCACCAGGAGGTCGGCGACGCCAT
GTTTGCGGCGCGCGGCGGGAGGGGGCGCCACGGTTCCCCGCACCACCACG
TCCCGCCCCCTCCGATGAAGAGGATGATGCACGGCGCCCGCTCCCACCCC
GTCGCCCCCCCCCCTCCCCCGGCTCACATGGAAAACCACGACGACGCGCC
CGGTGGCAGAGGCGGTGGTCGCTGTGGTGGCCCTCTCTTTCACCCGGCGC
ACCAGCACTACGCGGAGATGTTCGACGAGGATGAGGGAGGTCGCCCCGGT
GTCTACCCCCACCATGGCCCTCCTCGCTGGATGGCGATCCACAGGGCTCA
CGGCGGTGGTGATGGCGGCGGCTACGGTGGCGGTGTTGGCCAGCAGCAGC
GCAGGGACTACTACTGGGGGTGA
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