mRNA_Ecto-sp13_S_contig1792.5465.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp13_S_contig1792.5465.1
Unique NamemRNA_Ecto-sp13_S_contig1792.5465.1
TypemRNA
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Homology
BLAST of mRNA_Ecto-sp13_S_contig1792.5465.1 vs. uniprot
Match: D7FSW0_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FSW0_ECTSI)

HSP 1 Score: 813 bits (2100), Expect = 1.230e-294
Identity = 408/432 (94.44%), Postives = 418/432 (96.76%), Query Frame = 3
Query:   45 MSSTTFEKRKSVALAACFNDKRCHRRLIGHRARTFDFQFHPTEDAAISASEDGTARVWDLSSGRCAKSLEGHNKKHEVLRACWAPPGAANDSVSVATGSADGIVRLWGMRHDDCRDAKSGVDRYRSLKVVGQLRHRNEAKGLDGQVYSCHFIPDPSGGAPPSSAAAMCLLTASDSSVHLWDVETRKRASSRALSKVGAHSIGGERNPDDLAFVFDAKPRPGSGSSVLAVALSDGTVRVGDVLQEGEKAAVLRGATDTHLTSLAWSDDGTVLASCGGNGTMTVWDTRTWTVRSVLWGHSRPVYGAAFYPCAGNGXXXXXXXXXGAIS-GQDCPPQLLLSWSSDETVCAWDTGRATGDATAPLATLSVEEGFPVYSCSVSADGRRFALAGGRGDEKSAGFLGVPIKIVDLSDEARAKDGKDSCSDNGSNKPAQG 1337
            MSSTTFE+RKSVALAACFNDKRCHRRLIGHRARTFDFQFHPTEDAAISASEDGTARVWDLSSG+CAKSLEGHNKKHEVLRACWAPPGAANDSVSVATGSADGIVRLWG+RH D RD KSGVDRY+SLKVVGQLRHRNEAKGLDGQVYSCHFIPDPSGGAPPSSAAAMCLLTASDSSVHLWDVETRKR SSRALSKVGAHSIGGERNPDDLAFVFDAKPRPGSGSSVLAVALSDGTVRVGDVLQ+GEKAAVLRG TDTHLTSLAWSDDGTVLASCGGNGT+TVWDTRTWT RSVLWGHSRPVYGAAFY CAGNGXXXXXXXXX     GQDCPPQLLLSWSSDETVCAWDTGRATGDATAPLATLSVEEGFPVYSCSVSADGRRFALAGG GDEKSAGFLGVPIK+VDLSDEARAKDGK+S +DNGSN+PAQG
Sbjct:    1 MSSTTFEERKSVALAACFNDKRCHRRLIGHRARTFDFQFHPTEDAAISASEDGTARVWDLSSGKCAKSLEGHNKKHEVLRACWAPPGAANDSVSVATGSADGIVRLWGIRHGDGRDEKSGVDRYQSLKVVGQLRHRNEAKGLDGQVYSCHFIPDPSGGAPPSSAAAMCLLTASDSSVHLWDVETRKRVSSRALSKVGAHSIGGERNPDDLAFVFDAKPRPGSGSSVLAVALSDGTVRVGDVLQQGEKAAVLRGVTDTHLTSLAWSDDGTVLASCGGNGTITVWDTRTWTARSVLWGHSRPVYGAAFYSCAGNGXXXXXXXXXXXXXXGQDCPPQLLLSWSSDETVCAWDTGRATGDATAPLATLSVEEGFPVYSCSVSADGRRFALAGGGGDEKSAGFLGVPIKLVDLSDEARAKDGKESFADNGSNEPAQG 432          
BLAST of mRNA_Ecto-sp13_S_contig1792.5465.1 vs. uniprot
Match: A0A835YNR1_9STRA (WD40-repeat-containing domain protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YNR1_9STRA)

HSP 1 Score: 216 bits (549), Expect = 1.560e-59
Identity = 172/497 (34.61%), Postives = 212/497 (42.66%), Query Frame = 3
Query:   84 LAACFNDKRCHRRLIGHRARTFDFQFHPT-EDAAISASEDGTARVWDLSSGRCAKSLEGHNKKHEVLRACWAPPGAANDSVSVATGSADGIVRLWGM--------RHDDCRDAKSGVDRYRSLKVVGQLRHRNEAKGLDGQVYSCHFIPDPSGGAPPSSAAAMC--------------------------LLTASDSSVHLWDVETRKRASSRALSKVGAHSIGGE-RNPDDLAFVFDAKPRPGSGSS-----VLAVALSDGTVRVGDVLQEGEKAAVLR----GATD-------------THLTSLAWSDDGTVLASCGGNGTMTVWDTRTWTVRSVLWG---------------------------HSRPVYGAAFYPCAGNGXXXXXXXXXGAISGQDCPPQLLLSWSSDETVCAWDTGRATGDAT----APLATLSVEE-------------------GFPVYSCSVSADGRRFALAGGRGDEKSAGFLGVPI 1250
            LA  + D+   ++L+GH+ R FDFQFHPT    A S SEDGT RVWD+  G    S +G   K EVLR CWAPPG     + +A+GSADG+VRLW M        R    RD  S      +L+ V  L  +  A G DGQVY+  FI    GG+                                   L+ A+D +V LWDV T       A S    H+ GG  RNPD+  FVFDAK   GSG S      LA ALSDGTVRV   L     A+ L     G+                HLT++AW+ DG+ LA+CG    + VWD RTWT R+ L                             HSRPVYG  F   A                     PQLLLSWSSD T+ AWD G A  D      APL   S                       +P+  C+++ D     +AGG    + A   GVP+
Sbjct:   24 LATRWRDQSRRKQLLGHKGRVFDFQFHPTVHSRAASCSEDGTVRVWDVQRGVSIASAKG--SKDEVLRICWAPPGTPG--IDLASGSADGLVRLWAMSAATSTATRGAPGRDGSSAA----ALRCVKTLDVKAAAGG-DGQVYALQFIGADGGGSSSGIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGNLMVAADDAVSLWDVGTGVVTRRWAFSSSAQHAHGGAARNPDNQVFVFDAKVCCGSGGSGGGDGTLAAALSDGTVRV-QPLDSELPASTLHPCGSGSNSGXXXXXXXXXXXXAHLTAVAWAPDGSALAACGXXXGVEVWDARTWTRRAALQAQALAVSVRERLRCAANTQYGDHLPAAAHSRPVYGVMFCASA---------------------PQLLLSWSSDGTLKAWDWGAAANDMNGGDFAPLQQRSTAAQLVDVMRITCQHREVLSSGDYPILHCALARDASSVVVAGGDSGARGAAMTGVPV 489          
BLAST of mRNA_Ecto-sp13_S_contig1792.5465.1 vs. uniprot
Match: A0A7S2S0D4_9STRA (Peroxin-7 n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2S0D4_9STRA)

HSP 1 Score: 204 bits (518), Expect = 2.160e-56
Identity = 147/413 (35.59%), Postives = 206/413 (49.88%), Query Frame = 3
Query:  117 RRLIGHRARTFDFQFHPTEDAAIS-ASEDGTARVWDLSSG--RCAKSLEGHNKKHEVLRACWAPPG-----------AANDSVS---VATGSADGIVRLWGMRHDDCRDAKSGVDRYRSLKVVGQLRHRNEAKGLDGQVYSCHFIPDPSGGAPPSSAAAMCLLTASDSSVHLWDVE-TRKRASSRALSKVGAHSI------GGERNPDDLAFVFDAKPRP-GSGSSVLAVALSDGTVRV--GDVLQEGEKAAVLRGATDTHLTSLAWSDDGTVLASCGGNGTMTVWDTRTWTVRSVLWG-HSRPVYGAAFYPCAGNGXXXXXXXXXGAISGQDCPPQLLLSWSSDETVCAWDTGRATGDATAPLATLSVEEG--FPVYSCSVSADGRRFALAGGRGDEKSAGFLGVPIKIVDL 1265
            R L+GH++R FD  F P   + ++ ASED TARVW   +    C  +L GH+   EVLR  WAPP            A  DS +   + TG ADG VR+W          K  VD   + + V  L H     G D QVYSC F    +GG  P       ++ A+ S V+LWD++ T   A+ R +++    S+      GGERN     +VFD +    G+  +++A ALSDG+ R+  G      +    L  +   H+TS++W+ DG  LA   G+G++ +WDTRTW  R VL G H RPV+GA F+P +                     P  L+SWSSD ++ AW+T  +  D  APL+  S  EG  +P+ SC  S+ G    +AGG G   S  FLG P+ + DL
Sbjct:   36 RALLGHKSRCFDCHFQPGSRSLVATASEDCTARVWQAGASGYSCLATLRGHSS--EVLRVSWAPPSLSAGLSMAAGSAGTDSEAAHVLCTGGADGAVRVW----------KVAVDGT-AHEEVALLDH-----GEDNQVYSCLFTDSIAGGGAP------VVIAAAGSKVNLWDLDATSAPATGRLIAEWEYASLPSGQVYGGERNAAQENYVFDLQISSLGASHTLIAAALSDGSTRITGGHGGAVHQNVVALTTSDMVHVTSVSWAADGLSLACSRGDGSIVIWDTRTWRSRGVLQGGHQRPVFGAKFHPAS---------------------PHFLVSWSSDGSMGAWNTSVSAEDMDAPLSMFSTREGADYPILSCDFSSAGDALLIAGGSGSGNS--FLGTPVWLHDL 401          
BLAST of mRNA_Ecto-sp13_S_contig1792.5465.1 vs. uniprot
Match: A0A7S1VKZ2_9STRA (Hypothetical protein n=1 Tax=Grammatophora oceanica TaxID=210454 RepID=A0A7S1VKZ2_9STRA)

HSP 1 Score: 155 bits (392), Expect = 1.690e-37
Identity = 134/504 (26.59%), Postives = 211/504 (41.87%), Query Frame = 3
Query:   99 NDKRCHRRLIGHRARTFDFQFHPTE-DAAISASEDGTARVWDLSSGRCAKSLEGHNKKHEVLRACWAPPGAANDSVS---------VATGSADGIVRLWGMRHDDCRDAK----SGVDRYRSLKVVGQLRHRNEAKGLDGQVYSCHFIPD----PSGGAPPSSAAAMCLLTASDSSVHLWDVETRKRAS-------------------SRALSKVGAHSI----------------------------------------GGERNPDDLAFVFDAKPRPGSGSSVLAVALSDGTVRVGDVLQEGEKAAVLRGATDTHLTSLAWSDDGTVLASCGGNGTMTVWDTRTWTVRSVLW----------GHS--RPVYGAAFYPCAGNGXXXXXXXXXGAISGQDCPPQLLLSWSSDETVCAWDTGRATGDATAPLATLSVEEGFPVYSCSVS-------------------ADGRRFALAGGRGDEKSAGFLGVPIKIVDLSD-EARA 1283
            N++ C    +GH+   +   F P   +   +AS+D T R+W+ ++     +LEGH+K++EVLR  WA    A+  +          +A+G ADG+V++W +  D    AK    + +D + SL++  +    + ++    Q+Y   FI D      GG    S     LLT+S+  VHLW++E  +                        +L  V ++ I                                        GGERNP+++ FVFD    P +G  +  VALSDG++R+ +       A  L G   +HLTSLAW   G  LASC   G + +WD    T  S  W          GH+  RP+YGA +    G G                    L+LSW +D  +C WD   + G+  AP++ L  +  +P ++  V+                   +DG  +++  G G  +  GFLG+P  I D+   E+RA
Sbjct:   53 NERTC----LGHKETVYGLTFSPDNAEYMATASQDATVRIWNTATHTLEHTLEGHSKENEVLRVAWASSAWASRDLKRGPKQHQHLIASGGADGVVKVWSLSSDAAGSAKWKCVATLD-HSSLELRPKPATNDGSEPDPPQIYGLQFIDDWKGVGGGGCNDDSHTNSFLLTSSEDFVHLWEIENVQNGKVFFIEVLSIRFTSLYDVGYGVSLFPVTSNGIDITSNKENMDAAAAPQTIDLSNPVDPATVLNPEQEQNQPFGGERNPENIIFVFDVSYCPANG--ITGVALSDGSLRLVNGRGVAVAALTLPGC-QSHLTSLAWDSTGNRLASCVATGHVILWDLHLGTADSHEWRPSCRAVLEGGHTLGRPLYGAKY---CGEG-------------------NLILSWGADGKICLWDA-HSLGNIQAPISVLLSKPDYPFFAVDVATKTTSNVGKSADAKNSNEKSDGDGYSVMVGAGGGREGGFLGLPTYIYDVKPVESRA 525          
BLAST of mRNA_Ecto-sp13_S_contig1792.5465.1 vs. uniprot
Match: A0A7S2CQ19_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2CQ19_9STRA)

HSP 1 Score: 146 bits (369), Expect = 1.240e-36
Identity = 103/286 (36.01%), Postives = 141/286 (49.30%), Query Frame = 3
Query:  459 AKGLDGQVYSCHFIPDPSGGAPPSSAAAMCLLTASDSSVHLWDVE----TRKRASSRALSKVGAHSI--GGERNPDDLAFVFDAK---PRPGSGSSVLAVALSDGTVRVGDVLQEG----EKAAVLRGATDTHLTSLAWSDDGTVLASCGGNGTMTVWDTRTWTVRSVLWG-HSRPVYGAAFYPCAGNGXXXXXXXXXGAISGQDCPPQLLLSWSSDETVCAWDTGRATGDATAPLATLSVEE---GFPVYSCSVSADGRRFALAGGRGDEKSAGFLGVPIKIVDL 1265
            A G D QVYSC FIP+ S            L+TA++S+V  WD+     + +  S+ +   +G  +   G +RNP++  FVFD +   P  G  + + A ALSDGT RV   L  G       A L       L+++ WS DG  LA+  G+G++ VWD+RTW  R+VL G HSRP YG+ F+P                       P LLLSWSSD T+  WD+ R              +     +P+  C+ S DGR   +AGG G   S  FLGVP+ +VDL
Sbjct:    8 AHGKDAQVYSCGFIPETS-----------FLITAAESTVRCWDLRVGSSSEEPTSAWSYDSIGRTTPYGGAQRNPNNENFVFDIRVSPPATGGVNRLFAAALSDGTARVSAGLHAGGVSPTSVADLSLNDGVMLSAIEWSPDGRSLAASRGDGSLLVWDSRTWKCRAVLAGAHSRPCYGSVFHPH---------------------DPALLLSWSSDGTIALWDSLRTERPEPIHYGLTPHQADSPSYPILRCAWSPDGRSLVVAGGDGSG-SMSFLGVPVWLVDL 260          
BLAST of mRNA_Ecto-sp13_S_contig1792.5465.1 vs. uniprot
Match: A0A7S4E2U9_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S4E2U9_9STRA)

HSP 1 Score: 141 bits (356), Expect = 9.030e-34
Identity = 127/410 (30.98%), Postives = 181/410 (44.15%), Query Frame = 3
Query:   96 FNDKRCHRRLIGHRARTFDFQFHPTEDAAISASEDGTARVWDLSSGRCAKSLEGHNKKHEVLRACWAPP---GAANDSVSVATGSADGIVRLWGMRHDDCRDAKSGVDRYRSLKVVGQLRHRNEAKGLDGQVYSCHFIPDPSGGAPPSSAAAMCLLTASDSSVHLWDVETRKRASSRALSKVGAHSIGGERNPDDLAFVFDAKPRPGSGSSVL----AVALSDGTVRVGDVLQEGEKAAVLRGATDTHLTSLAWSDDGTVLASCGGNGTMTVWDTRTWTVRSVLWG-HSRPVYGAAFYPCAGNGXXXXXXXXXGAISGQDCPPQLLLSWSSDETVCAWDTGRATGDATAPLATLSVEEGFPVYSCSVSADGRRFALAGGRGDEKSAGFLGVPIKIVDLSDEARAKDGKDS 1301
            +N     R   GH  R FD      +   ++ASEDGTA+VW L+ GR    +     K EVLR  WAPP    AA  S+ +A   ADG   LW  R DD          + + K + +L H  +      QVY C +       +    A    LLTA+ ++V  WDV   K     +  +             D A+VFD +P P      L    A A+SDGT RV DV  + + A VLR   D+ +T++ W   GT +ASC G+G   VWD RTW +   L G H+ P YGAA                 G ++      + L  WS ++ +   D   AT  ATAP+ T +     P++ C+ S+      + GG G +  A  +   + + DLS +    D +D+
Sbjct:    7 YNINAKQREFAGHTGRVFDVDLGQ-DGLCVTASEDGTAKVWRLADGRLEGEVAQSQTKDEVLRVAWAPPIVRDAAGASL-LAVAGADGFCNLW--RGDD----------WSAPKSLQRLDHGGD------QVYGCAW-------SACGDAYGAWLLTAAGAAVRTWDVNAGKSIKQWSYQEPRG----------DQAYVFDVQPAPRDADDALRATIACAVSDGTARVRDVRLDYD-ARVLRAPGDSKVTAVGWLG-GTAVASCYGDGCCRVWDARTWKLLGRLKGAHASPCYGAA--------------KTDGFVASWAA--EGLAFWSCEDALRKAD---ATKKATAPI-TDAAGNAVPLFQCAFSSS--NIVVCGGAGGKGDA--IVPSVFVYDLSKKRSRGDEEDA 353          
BLAST of mRNA_Ecto-sp13_S_contig1792.5465.1 vs. uniprot
Match: W7TKJ2_9STRA (Ribosome assembly protein 4 n=2 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TKJ2_9STRA)

HSP 1 Score: 142 bits (357), Expect = 2.790e-33
Identity = 126/453 (27.81%), Postives = 199/453 (43.93%), Query Frame = 3
Query:   63 EKRKSVALAACFNDKRCHRRLIGHRARTFDFQFHPTEDAAISASEDGTARVWDLS-SGRCAKSLEGHNKKHEVLRACWAPP--------------GAANDSVSVATGSADGIVRLWGMRHDDCRDAKS--GVDRYRSLKVVGQ---LRHRNEAKGLDGQVYSCHFIPDPSGGAPPSSAAAMCLLTASDSSVHLWDVETRKRASSRALSKVGAHSIGG--------ERNPDDLAFVFDA---KPRPGSGSSVLAVALSDGTVRVGDVLQEGEKAAVLRGATDTHLTSLAWSDDGTVLASCGGNGTMTVWDTRTWTVRSVLWGHSRPVYGAAFYPCAGNGXXXXXXXXXGAISGQDCPPQLLLSWSSDETVCAWDTGRATGDATAPLATLSVEEGFPVYSCSVSADGRRFALAGGRGDEKSAGFLGVPIKIVDLSDEARAKDGKDSCSDNGSNKP 1328
            E+  S A + C    +       H  R FD  F  +     SAS+    ++WD++ SG   K L+      EVLR  W                    N +   ATG+A G VR++ +       AKS    ++    K  G    L+      G D Q+Y+  ++      + PS      L+TA+D  ++ WDVE +   ++ A   V   +  G        +RNP ++ ++FDA   +  PG G  V+ VALSDG+VRV D  +     A ++GA + HLT+L  +    +L +CGG G +  +DTRT++VR+VL GH RPV+GAA  P                +  +     ++++WS+D T+  +D    TG++ A          FP+ +C+     R+  L GG          GVP     L ++ +  +    C  +G  KP
Sbjct:   19 ERGPSTASSMCLGGSQATALPQAHSERVFDLAFDKSNRWMASASDAEDVKIWDVAASGEVPKLLQRLPHAAEVLRVAWKGQPRDGEQSRDGERVADLPNTTSWFATGTAAGAVRIYCV----AAQAKSERNPNKSHDQKEAGATFALKTEFAHPGPDQQIYALLWLETTELNSQPS------LMTAADDKIYWWDVENQSLTNTWAFDSVAPTTEPGNRAAYGGVKRNPANICYIFDAVAGELYPGQGEDVVCVALSDGSVRVLD-RRSARTVARVQGA-EGHLTALHLATHEHLLLACGGRGDVVAFDTRTFSVRAVLKGHGRPVFGAALVP----------PDLTNCVGSEAINAPMVMTWSTDTTLRFFDLN--TGNSAARHVVCHPR--FPILTCAFRPGHRQLVLGGG---------TGVPEPHTHLPEDLQKTE---KCCAHGDVKP 433          
BLAST of mRNA_Ecto-sp13_S_contig1792.5465.1 vs. uniprot
Match: A0A4D9DI99_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9DI99_9STRA)

HSP 1 Score: 122 bits (307), Expect = 1.230e-27
Identity = 94/299 (31.44%), Postives = 148/299 (49.50%), Query Frame = 3
Query:  465 GLDGQVYSCHFIPDPSGGAPPSSAAAMCLLTASDSSVHLWDVETRKRASSRALSKVGAHSIGG--------ERNPDDLAFVFDA---KPRPGSGSSVLAVALSDGTVRVGDVLQEGEKAAVLRGATDTHLTSLAWSDDGTVLASCGGNGTMTVWDTRTWTVRSVLWGHSRPVYGAAFYPCAGNGXXXXXXXXXGAISGQDCPPQLLLSWSSDETVCAWDTGRATGDATAPLATLSVEEGFPVYSCSVSADGRRFALAGGRGDEKSAGFLGVPIKIVDLSDEARAKDGKDSCSDNGSNKP 1328
            G D Q+Y+  ++      + PS      L+TA+D  ++ WDVE +   ++ A   V   +  G        +RNP ++ ++FDA   +  PG G  V+ VALSDG+VRV D  +     A ++GA + HLT+L  +    +L +CGG G +  +DTRT++VR+VL GH RPV+GAA  P                   +     ++++WS+D T+  +D    TG++TA    ++    FP+ +C+ S   R+  L GG          GVP     L  + + K GK  C  +G  KP
Sbjct:   22 GPDQQIYALLWLETTELNSQPS------LMTAADDKIYWWDVENQSLTNTWAFDSVAPTTEPGNRAAYGGVKRNPANICYIFDAVVGELYPGQGEDVVCVALSDGSVRVLD-RRSARTVARVQGA-EGHLTALRLATHEHLLLACGGRGDVVAFDTRTFSVRAVLKGHGRPVFGAALVP----------PDLTNCFGSEGIKAPMVMTWSTDTTLRFFDLN--TGNSTARH--VACHPRFPILTCAFSPGHRQLVLGGG---------TGVPEPHTHLPQDLQ-KTGK--CCAHGDVKP 286          
BLAST of mRNA_Ecto-sp13_S_contig1792.5465.1 vs. uniprot
Match: A0A7S1DA97_CYCTE (Hypothetical protein n=1 Tax=Cyclophora tenuis TaxID=216820 RepID=A0A7S1DA97_CYCTE)

HSP 1 Score: 101 bits (252), Expect = 3.770e-20
Identity = 91/310 (29.35%), Postives = 131/310 (42.26%), Query Frame = 3
Query:  549 LLTASDSSVHLWDVETRKRASSRALSKV-----------------------------------------GAHSIGGERNPDDLAFVFDAKPRPGSGSSVLAVALSDGTVRVGDVLQEGEKAAV----LRGATDTHLTSLAWSDDGTVLASCGGNGTMTVW--DTRTWTVRSVLW---------GHS--RPVYGAAFYPCAGNGXXXXXXXXXGAISGQDCPPQLLLSWSSDETVCAWDTGRATGDATAPLATLSVE-EGFPVYSCSVSADGR-----------RFALAGGRGDEKSAGFLGVPIKIVDLS 1268
            L+T+SD  +HLW+++      S  L++V                                         G    GGERNPD+L FVFDA   P SG  +L  ALSDG+VR    L  G    V    L G   +H+TS +W   GT LASC   G + +W  D   ++ R  +          GH   RP++GA +  C G                     +LL+SW  D  +C WD+ R+ G+  APL TL  + + +P+Y+  +   G            R A+ GGR      GFLG+P+ + D++
Sbjct:   14 LMTSSDDFLHLWEIDEPSTEESWELTEVMSIRFTPMETFGYGVTVCRITGKGLDIPGGWSSSRASPGGDGGVGYGGERNPDNLVFVFDASYCPSSG--LLGAALSDGSVR----LMNGRGVCVSILTLPGC-QSHMTSFSWDSSGTRLASCVATGHLILWEIDLAGYSYRGSVTPACMAVLEGGHQVGRPLFGAQY--CGGK------------------EEELLVSWGIDGRLCLWDS-RSQGNIGAPLNTLVAKNDDYPIYAIDMFHGGXXXXXXXXXEVSRMAVGGGR----EGGFLGIPLYLYDIT 291          
BLAST of mRNA_Ecto-sp13_S_contig1792.5465.1 vs. uniprot
Match: A0A7S1ZZE4_TRICV (Hypothetical protein (Fragment) n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S1ZZE4_TRICV)

HSP 1 Score: 102 bits (254), Expect = 6.520e-20
Identity = 123/410 (30.00%), Postives = 166/410 (40.49%), Query Frame = 3
Query:  171 EDAAI--SASEDGTARVW--DLSSGR--CAKSLEGHN-KKHEVLRACWAPPGAANDSVSVATGSADGIVRLWGMRHDDCRDAKSGVDRYRSLKVVGQLRHRNEAKGLDG-QVYSCHFIPDPSG-GAPPSSAAAM---CLLTASDSSVHLW-------------DVE-----------------------------------TRKRASSRALSKVGAH----SIGGERNPDDLAFVFDAKPRPGSGSSVLAVALSDGTVRVGDVLQEGEKAAVLR-GATDTHLTSLAWSDDGTVLASCGGNGTMTVW-----DTRTWT---VRSVLWG---HSRPVYGAAFYPCAGNGXXXXXXXXXGAISGQDCPPQLLLSWSSDETVCAWDTGRATGDATAPLATLSVEEGFPVYSCSV 1172
            +DA +  SA  DG  +VW  D ++G+  C  +L+ H  KK    R     P A                    MR +D      G+D               E +G +  QVY+  F+ D  G G P  + A M    LLT+SD  VHLW             D E                                    +KR+ SR     GA     + GG+RNPD+L FVFDA   P +G  +L  ALSDGT+R+  V   G   ++L+      H+TSLAW + GT LAS      + +W     D R W      +VL G   + RPV+GA +  C G                QD    LLLSW  D  +C WD  R+TG   +PL+ L  +  FP+Y+  V
Sbjct:   16 DDAPLLASAGADGVVKVWRHDEAAGKWICVSTLDHHKMKKRTAARRSGGEPDAP-------------------MRSED-----DGMDD----------EGNEEGEGTEPPQVYALAFVEDWCGPGNPHQAGAGMGEDLLLTSSDDYVHLWRPTMGGGGENVLRDAEGGGAKMRLDRRMALRFGHMHEANWGVSAQVDGASWPKKRSRSRDDDSSGAQQQPRAFGGDRNPDNLVFVFDASFCPSNG--LLGAALSDGTLRL--VNGRGVCVSLLQLPGCRAHITSLAWDETGTRLASTIATSHVILWTVDGGDGRGWPRSGCAAVLEGGHDYGRPVFGAKY--CGG--------------PNQD----LLLSWGVDGKMCVWDA-RSTGQIRSPLSILVSDGSFPLYAVDV 366          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig1792.5465.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FSW0_ECTSI1.230e-29494.44Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A835YNR1_9STRA1.560e-5934.61WD40-repeat-containing domain protein n=1 Tax=Trib... [more]
A0A7S2S0D4_9STRA2.160e-5635.59Peroxin-7 n=1 Tax=Rhizochromulina marina TaxID=103... [more]
A0A7S1VKZ2_9STRA1.690e-3726.59Hypothetical protein n=1 Tax=Grammatophora oceanic... [more]
A0A7S2CQ19_9STRA1.240e-3636.01Hypothetical protein n=1 Tax=Dictyocha speculum Ta... [more]
A0A7S4E2U9_9STRA9.030e-3430.98Hypothetical protein n=1 Tax=Pelagomonas calceolat... [more]
W7TKJ2_9STRA2.790e-3327.81Ribosome assembly protein 4 n=2 Tax=Nannochloropsi... [more]
A0A4D9DI99_9STRA1.230e-2731.44Uncharacterized protein n=1 Tax=Nannochloropsis sa... [more]
A0A7S1DA97_CYCTE3.770e-2029.35Hypothetical protein n=1 Tax=Cyclophora tenuis Tax... [more]
A0A7S1ZZE4_TRICV6.520e-2030.00Hypothetical protein (Fragment) n=1 Tax=Trieres ch... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig1792contigEcto-sp13_S_contig1792:2530..5268 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop1
Start1
Seed ortholog score810.4
Seed ortholog evalue3.9e-232
Seed eggNOG ortholog2880.D7FSW0
Model size1660
KEGG koko:K01265,ko:K11797
Hectar predicted targeting categoryother localisation
Exons2
EggNOG free text desc.transcription initiation from RNA polymerase II promoter
EggNOG OGsCOG2319@1,KOG0263@2759
Ec32 ortholog descriptionWD40/YVTN repeat-like-containing domain
Ec32 orthologEc-27_006570.1
EC3.4.11.18
Cds size1296
COG Functional cat.Q
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko01000,ko01002,ko04121
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681462927.7076461-UTR-Ecto-sp13_S_contig1792:2529..28491681462927.7076461-UTR-Ecto-sp13_S_contig1792:2529..2849Ectocarpus species13 EcNAP12_S_4_19mUTREcto-sp13_S_contig1792 2530..2849 -
1681462927.7409945-UTR-Ecto-sp13_S_contig1792:5224..52681681462927.7409945-UTR-Ecto-sp13_S_contig1792:5224..5268Ectocarpus species13 EcNAP12_S_4_19mUTREcto-sp13_S_contig1792 5225..5268 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681462927.7218044-CDS-Ecto-sp13_S_contig1792:2849..40311681462927.7218044-CDS-Ecto-sp13_S_contig1792:2849..4031Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig1792 2850..4031 -
1681462927.7311904-CDS-Ecto-sp13_S_contig1792:5110..52241681462927.7311904-CDS-Ecto-sp13_S_contig1792:5110..5224Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig1792 5111..5224 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig1792.5465.1prot_Ecto-sp13_S_contig1792.5465.1Ectocarpus species13 EcNAP12_S_4_19mpolypeptideEcto-sp13_S_contig1792 2850..5224 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp13_S_contig1792.5465.1

>prot_Ecto-sp13_S_contig1792.5465.1 ID=prot_Ecto-sp13_S_contig1792.5465.1|Name=mRNA_Ecto-sp13_S_contig1792.5465.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=432bp
MSSTTFEKRKSVALAACFNDKRCHRRLIGHRARTFDFQFHPTEDAAISAS
EDGTARVWDLSSGRCAKSLEGHNKKHEVLRACWAPPGAANDSVSVATGSA
DGIVRLWGMRHDDCRDAKSGVDRYRSLKVVGQLRHRNEAKGLDGQVYSCH
FIPDPSGGAPPSSAAAMCLLTASDSSVHLWDVETRKRASSRALSKVGAHS
IGGERNPDDLAFVFDAKPRPGSGSSVLAVALSDGTVRVGDVLQEGEKAAV
LRGATDTHLTSLAWSDDGTVLASCGGNGTMTVWDTRTWTVRSVLWGHSRP
VYGAAFYPCAGNGGGGAAAAAAGAISGQDCPPQLLLSWSSDETVCAWDTG
RATGDATAPLATLSVEEGFPVYSCSVSADGRRFALAGGRGDEKSAGFLGV
PIKIVDLSDEARAKDGKDSCSDNGSNKPAQG*
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mRNA from alignment at Ecto-sp13_S_contig1792:2530..5268-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp13_S_contig1792.5465.1 ID=mRNA_Ecto-sp13_S_contig1792.5465.1|Name=mRNA_Ecto-sp13_S_contig1792.5465.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=2739bp|location=Sequence derived from alignment at Ecto-sp13_S_contig1792:2530..5268- (Ectocarpus species13 EcNAP12_S_4_19m)
GAGACACCCCAACCCAGAGGATACTACAAGCTGTGGAACAAACGATGTCT TCGACCACCTTCGAGAAACGTAAGAGTGTCGCTCTGGCGGCCTGCTTCAA CGACAAGCGTTGCCATCGGCGCCTGATCGGCCATCGAGCTCGCACCTTTG ATTTTCAGGTAAAATTCGAATTTCCTCAACTGTAAGTTTTGATCTGTAGC TGCAGTACAAAGTGGACTGTGCGCACATGCAACGGACGCTTATTCGACTA CACCGGCAGAGCTACCTTGCCGCGGCTTGCAATTCCTAGCGACGACATCT TATGTGCATGTTTTTTGCCGTTCAAAGTGTGTTCAAGATCGAACCGATGG CTGGATGCAAGTGGAATTCAAATAATTTTGCAGTTGCCCCGCAGAAAATC GAAACCACGCTCGCTCGCTTGTTGGTGGTACAAGCAGACGCAACATGTAG CATGCAGCGACAGACGTGATGAATGCAACCAATTCACCACAGTGTAGTAC TTCGTAACATTTGTATCATGGACTACATGCGCCGGTCGCCCCGGCGGTCT CGTGGGAAACCTCGAAGACCTTTTGTTCTTGTAGCAGTTTGTGGGTTTGA ATCCGTCTCGTGAACATAGACGTGCTTCAAGTAATAGGGAAAAGACTGCT GAAGCCTTCTCGCGTGCAACTTGACGGCAAGTACCGCAGGGAGAAGGTGG GGCAACATCAACAATACGAAAACCCCGCGATATCTACCTTCCTGCTGTGT AACCCCGGCTGATGCGTCCAGTACGGAACTTGTCCAGCACTGCGCGCTGA GCACCTCCATTCTGAACCCCCCCCCCCATAATATCTCATGCGGAGCGGAG GACCCATACTCCGCAAGAAAGGCGCTCGTGTTGAGAAGGAAATGGTGTAT CTTGGCAGTATCGAGCACCCGTGTAGTCTTCCAAAGCTATATCGCTGAAA GGACCGAGGCCGACACGCGATGGAGCCGTTTACAGTCAGTCTTCATTCGC ACGAGGACGTAGCCAAACTCTGGCTCACAACCAGTTTGGTAGATACAGCC TGACCGTCATGCCACTACCTGCACAGCTGGCTCTGAAGTGCGGTGTCAAT CTGATCGGTGCGCACCCAACGTGTGCCGTCCCGATTTTCGTAGGGATGTT AGGCTTTTTGGTCGAAAGCACCACGGCCAGCTCTAAATCGATTACATCTC CTCCGCCACCCCATGTCCCACCCTAACCCCAATGCAGTTCCACCCCACAG AAGACGCCGCTATATCGGCGAGCGAGGACGGAACGGCCCGCGTGTGGGAC CTCAGCAGCGGAAGGTGCGCCAAGTCCCTTGAGGGGCACAACAAAAAACA CGAGGTGTTGCGGGCGTGCTGGGCCCCGCCGGGGGCGGCGAACGACTCGG TCTCCGTTGCTACCGGCTCGGCCGACGGCATCGTCCGCCTGTGGGGCATG CGGCATGACGACTGCAGGGACGCAAAGAGCGGGGTAGACCGATACCGATC CCTCAAGGTCGTTGGGCAGCTGCGGCATCGCAACGAGGCGAAAGGGCTCG ACGGCCAGGTCTACTCTTGCCACTTCATTCCCGATCCCAGCGGTGGCGCG CCGCCATCGTCGGCAGCGGCCATGTGTCTGCTCACGGCTAGCGACAGCAG CGTTCACCTGTGGGACGTGGAGACGCGGAAGCGGGCATCGTCCCGAGCCC TGTCGAAAGTCGGGGCACATTCTATCGGCGGGGAGCGGAACCCGGATGAC CTCGCGTTCGTGTTCGACGCCAAGCCCCGCCCGGGGTCGGGGAGCTCAGT TCTCGCCGTCGCCCTAAGCGACGGCACGGTGAGGGTCGGGGATGTCCTCC AAGAGGGTGAAAAGGCCGCGGTGCTTCGAGGAGCCACCGACACCCATCTC ACGAGTTTGGCGTGGTCGGACGATGGGACGGTCTTGGCTTCGTGCGGGGG AAACGGGACGATGACGGTGTGGGACACGAGAACCTGGACGGTAAGGTCAG TCTTGTGGGGCCACTCGAGGCCGGTGTACGGGGCGGCCTTCTACCCGTGT GCTGGCAACGGCGGGGGAGGAGCAGCGGCGGCGGCGGCGGGGGCAATATC GGGACAAGATTGCCCGCCCCAGCTCTTGCTGTCGTGGTCTAGCGACGAGA CCGTGTGCGCTTGGGACACAGGCAGAGCCACCGGTGACGCGACAGCCCCG CTCGCAACCCTTTCAGTCGAGGAAGGGTTTCCCGTGTACAGTTGCTCGGT CTCGGCGGATGGCCGGCGGTTTGCCTTGGCGGGAGGACGCGGAGATGAGA AGAGCGCCGGCTTCCTCGGCGTTCCCATCAAGATCGTGGATCTGAGCGAC GAAGCGAGAGCGAAAGACGGCAAGGACAGTTGTTCCGACAATGGGAGCAA TAAACCAGCACAGGGATGAGTGTTATTGCTGTGCGTGTGAAACGCTGCGG TTCTCGATGTCGTTCGATCTGAGCCTACGTGAGTGTATTTACTATCGCGG GAATTTTCTCATGGTCTGAGTGTGCCGTGTCACGGGCCAAGTATTAGAAC CTAAACGGGGAATAAAACTGGTAGAGAGAGTACAGATAACAATAGCGAGC GGGAATACATTGGTGGTACATAATCAGCAGTCTCTCTGGTGCTGTGCTTC AAAAGGGCGTCTGATGTCTCCGCTCGTCTCCTCTGTTTTATCCATCAAAA GCAAAGAAGTACTTTTCATGCTCACCAGCTAACCTGAGG
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Coding sequence (CDS) from alignment at Ecto-sp13_S_contig1792:2530..5268-

>mRNA_Ecto-sp13_S_contig1792.5465.1 ID=mRNA_Ecto-sp13_S_contig1792.5465.1|Name=mRNA_Ecto-sp13_S_contig1792.5465.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=1296bp|location=Sequence derived from alignment at Ecto-sp13_S_contig1792:2530..5268- (Ectocarpus species13 EcNAP12_S_4_19m)
ATGTCTTCGACCACCTTCGAGAAACGTAAGAGTGTCGCTCTGGCGGCCTG
CTTCAACGACAAGCGTTGCCATCGGCGCCTGATCGGCCATCGAGCTCGCA
CCTTTGATTTTCAGTTCCACCCCACAGAAGACGCCGCTATATCGGCGAGC
GAGGACGGAACGGCCCGCGTGTGGGACCTCAGCAGCGGAAGGTGCGCCAA
GTCCCTTGAGGGGCACAACAAAAAACACGAGGTGTTGCGGGCGTGCTGGG
CCCCGCCGGGGGCGGCGAACGACTCGGTCTCCGTTGCTACCGGCTCGGCC
GACGGCATCGTCCGCCTGTGGGGCATGCGGCATGACGACTGCAGGGACGC
AAAGAGCGGGGTAGACCGATACCGATCCCTCAAGGTCGTTGGGCAGCTGC
GGCATCGCAACGAGGCGAAAGGGCTCGACGGCCAGGTCTACTCTTGCCAC
TTCATTCCCGATCCCAGCGGTGGCGCGCCGCCATCGTCGGCAGCGGCCAT
GTGTCTGCTCACGGCTAGCGACAGCAGCGTTCACCTGTGGGACGTGGAGA
CGCGGAAGCGGGCATCGTCCCGAGCCCTGTCGAAAGTCGGGGCACATTCT
ATCGGCGGGGAGCGGAACCCGGATGACCTCGCGTTCGTGTTCGACGCCAA
GCCCCGCCCGGGGTCGGGGAGCTCAGTTCTCGCCGTCGCCCTAAGCGACG
GCACGGTGAGGGTCGGGGATGTCCTCCAAGAGGGTGAAAAGGCCGCGGTG
CTTCGAGGAGCCACCGACACCCATCTCACGAGTTTGGCGTGGTCGGACGA
TGGGACGGTCTTGGCTTCGTGCGGGGGAAACGGGACGATGACGGTGTGGG
ACACGAGAACCTGGACGGTAAGGTCAGTCTTGTGGGGCCACTCGAGGCCG
GTGTACGGGGCGGCCTTCTACCCGTGTGCTGGCAACGGCGGGGGAGGAGC
AGCGGCGGCGGCGGCGGGGGCAATATCGGGACAAGATTGCCCGCCCCAGC
TCTTGCTGTCGTGGTCTAGCGACGAGACCGTGTGCGCTTGGGACACAGGC
AGAGCCACCGGTGACGCGACAGCCCCGCTCGCAACCCTTTCAGTCGAGGA
AGGGTTTCCCGTGTACAGTTGCTCGGTCTCGGCGGATGGCCGGCGGTTTG
CCTTGGCGGGAGGACGCGGAGATGAGAAGAGCGCCGGCTTCCTCGGCGTT
CCCATCAAGATCGTGGATCTGAGCGACGAAGCGAGAGCGAAAGACGGCAA
GGACAGTTGTTCCGACAATGGGAGCAATAAACCAGCACAGGGATGA
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