mRNA_Ecto-sp13_S_contig17910.5463.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig17910.5463.1 vs. uniprot
Match: D7FJB6_ECTSI (GPS domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FJB6_ECTSI) HSP 1 Score: 416 bits (1069), Expect = 1.890e-128 Identity = 216/229 (94.32%), Postives = 219/229 (95.63%), Query Frame = 3
Query: 648 VCQAILRKYNPSEKVVLQGCASPSAEEPCSSSTSSLFNLEWKPESGNLDLSNGWDDVFSTATSDRVLVVRKGVLGAGRTYTFSLSATDTSGQEGYTEFSFETNAPPAGGHVESNTSSATAGVDGVRLQSMGWTDDVDDLPFTHSFGFVHGCQQEATIASESVLVNRLSSSWSASPTLRTKIPSGLVDDGYNVTILVSVSDSLGSTASTNLGADGTPMIISSTPPEQARL 1334
V QAILRKYNPSEKVVLQGCASPSAEE CSSSTSSLF LEWKPESGN+DLSNGWDDVFST TSDRVLVVRKGVLGAGRTYTFSLSATDTSGQEGY EFSFETNAPPAGGHVESNTSSATAGVDGVRLQS+GWTDDVDDLPFTHSFGFVHG QQ ATIASESVLVNRLSSSWSASPTLRTKIPSGL DDGYNVTILVSVSDSLGSTASTNLGADGTPMII+STPPEQ L
Sbjct: 432 VMQAILRKYNPSEKVVLQGCASPSAEELCSSSTSSLFKLEWKPESGNVDLSNGWDDVFSTTTSDRVLVVRKGVLGAGRTYTFSLSATDTSGQEGYAEFSFETNAPPAGGHVESNTSSATAGVDGVRLQSVGWTDDVDDLPFTHSFGFVHGYQQVATIASESVLVNRLSSSWSASPTLRTKIPSGLADDGYNVTILVSVSDSLGSTASTNLGADGTPMIIASTPPEQENL 660
BLAST of mRNA_Ecto-sp13_S_contig17910.5463.1 vs. uniprot
Match: D7FJB7_ECTSI (GPS domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FJB7_ECTSI) HSP 1 Score: 328 bits (841), Expect = 2.220e-96 Identity = 178/296 (60.14%), Postives = 215/296 (72.64%), Query Frame = 3
Query: 654 QAILRKYNPSEKVVLQGCASPSAEEPCSSSTSSLFNLEWKPESGNLDLSNGWDDVFSTATSDRVLVVRKGVLGAGRTYTFSLSATDTSGQEGYTEFSFETNAPPAGGHVESNTSSATAGVDGVRLQSMGWTDDVDDLPFTHSFGFVHGCQQEATIAS-ESVLVNRLSSSWSASPTLRTKIPSGLVDDGYNVTILVSVSDSLGSTASTNLGADGTPMIISSTPPEQARLGNKYD*EGGASVLSLAYGLTCFPTD-FCGNESLAYPEDTLRDARVATALLLDAPRTNASDIEAIVALQ 1535
Q ILRKYNPSEK+VL CAS S E PC SSTSS F L W+ E+GNLDL NGW FST + R LV RKG LGAG+ Y+FSLSATD SG GY EFSFETNAPP+GGH++S+ SATAGV+ V LQ++GWTDD+DDLP T+SFG++ G + IAS ES LVNRLSSS S S TL T +P+GL + +N+TI+VS SD+LGSTA+TNLG DG PM+++S PE+A S+L LAY LTC+P + C N SL YPEDTLRDARVATALL P T + +E+ +LQ
Sbjct: 263 QTILRKYNPSEKIVLYACASSSPEGPCDSSTSSSFGLTWRQENGNLDLRNGWTKAFSTPVNARTLVTRKGALGAGQVYSFSLSATDASGLVGYAEFSFETNAPPSGGHLKSDRLSATAGVNPVVLQTLGWTDDIDDLPLTYSFGYIQGYHEVIAIASSESALVNRLSSSPSVSTTLTTNVPAGLSRNEFNLTIVVSASDTLGSTAATNLGEDGAPMVVTSVAPEEA------------SLLPLAYNLTCYPGEPSCQNGSLPYPEDTLRDARVATALLQHVPLTTSDGVESTSSLQ 546
BLAST of mRNA_Ecto-sp13_S_contig17910.5463.1 vs. uniprot
Match: A0A6H5JCS7_9PHAE (REJ domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JCS7_9PHAE) HSP 1 Score: 315 bits (808), Expect = 8.900e-92 Identity = 173/314 (55.10%), Postives = 214/314 (68.15%), Query Frame = 3
Query: 654 QAILRKYNPSEKVVLQGCASPSAEEPCSSSTSSLFNLEWKP-------------------ESGNLDLSNGWDDVFSTATSDRVLVVRKGVLGAGRTYTFSLSATDTSGQEGYTEFSFETNAPPAGGHVESNTSSATAGVDGVRLQSMGWTDDVDDLPFTHSFGFVHGCQQEATIASESVLVNRLSSSWSASPTLRTKIPSGLVDDGYNVTILVSVSDSLGSTASTNLGADGTPMIISSTPPEQARLGNKYD*EGGASVLSLAYGLTCFPTD-FCGNESLAYPEDTLRDARVATALLLDAPRTNASDIEAIVALQ 1535
+ ILRKYNPSEK+VL CAS S E PC SSTSS F L W+ E+GNLDL NGW + FST + R L++RKG LGAG+ Y+FSLSATD SG GY EFSFETNAPP+GGH++S+ SATAGV+ V LQ++GWTDD+DDLP T+SFG++ G + TIASES VN+LSSS S S TL T +P+G+ + +N+TI+VSVSD+LGS A+T LG DG PMI+ S P++A S+L LAY LTC+P + C N SL YPED LRDARVATALL P T +EA+ +LQ
Sbjct: 290 KTILRKYNPSEKIVLYACASSSPEGPCDSSTSSSFELMWRQPPPAPTSYLHIPRRCTFHQENGNLDLRNGWSEAFSTPVNARTLIIRKGALGAGQVYSFSLSATDASGLVGYAEFSFETNAPPSGGHLKSDRLSATAGVNPVVLQTLGWTDDIDDLPLTYSFGYIQGYHEVITIASESTFVNKLSSSPSVSTTLSTNVPAGISRNDFNLTIVVSVSDTLGSMAATTLGEDGAPMIVRSVAPQEA------------SLLPLAYNLTCYPDEPSCQNVSLPYPEDALRDARVATALLQHVPLTTLDGVEAMSSLQ 591
BLAST of mRNA_Ecto-sp13_S_contig17910.5463.1 vs. uniprot
Match: A0A6H5JEI1_9PHAE (REJ domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JEI1_9PHAE) HSP 1 Score: 228 bits (582), Expect = 3.830e-67 Identity = 152/321 (47.35%), Postives = 163/321 (50.78%), Query Frame = 3
Query: 159 ADQGEKSQRSQASRIFVGTRRQHLRLQGGRCRQHAEHYLGYCDS*GHQWSNNRPHLRWDNEEGWRHAGPLLQCVRVGG*RPIGQFPLTVQMELY*RRRRRLHISEHGALEY*LTLKRRTTDDNCGYPSNR*TMPCWHVLCEEHVHSRTTSLGDLRAPCVCLRCVCQAILRKYNPSEKVVLQGCASPSAEEPCSSSTSSLFNLEWKPESGNLDLSNGWDDVFSTATSDRVLVVRKGVLGAGRTYTFSLSATDTSGQEGYTEFSFETNAPPAGGHVESNTSSATAGVDGVRLQSMGWTDDVDDLPFTHSFGFVHGCQQEATIA 1121
ADQGEKSQR QASR F+ TRRQHLRLQG RCRQH E YLGYCD R A LL V L ++E G SN +L C++ C + ES NLDLSNGWDDVFS ATSDRVLVVRKGVLGAGRTY FSLSATDTSGQ+GY E+SFETNAPPAGGHVESNTSSA AGVDGVRLQS+GWTD VD+LPFTHSFGFVHG QQ ATIA
Sbjct: 134 ADQGEKSQRPQASRTFLRTRRQHLRLQGDRCRQHVERYLGYCD---------------------RGAVQLLDVVN-----------LDARVET-------------------------------GLNSN-------------------------------------------------ILPNCSN------C------------RQESENLDLSNGWDDVFSAATSDRVLVVRKGVLGAGRTYAFSLSATDTSGQKGYAEYSFETNAPPAGGHVESNTSSANAGVDGVRLQSIGWTDGVDELPFTHSFGFVHGYQQVATIA 324
BLAST of mRNA_Ecto-sp13_S_contig17910.5463.1 vs. uniprot
Match: D7G0D8_ECTSI (REJ domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G0D8_ECTSI) HSP 1 Score: 203 bits (516), Expect = 1.890e-53 Identity = 109/226 (48.23%), Postives = 150/226 (66.37%), Query Frame = 3
Query: 648 VCQAILRKYNPSEKVVLQGCASPSAEEPCSSSTSSLFNLEWKPESGNLDLSNGWDDVFSTATSDRVLVVRKGVLGAGRTYTFSLSATDTSGQEGYTEFSFETNAPPAGGHVESNTSSATAGVDGVRLQSMGWTDDVDDLPFTHSFGFVHGCQQEATIASESVLVNRLSSSWSASPTLRTKIPSGLVDDGYNVTILVSVSDSLGSTASTNLGADGTPMIISSTPPEQ 1325
V Q + RKYNPS ++VL GCA+ S E+ C +S+++ F+ +W N++ N W+DVFST +S VVR G L GR YTFSL+ATD+ G GYTEF+FETNAPP GG+V S+ T+G D LQ+ GW DD DLP + FG+ HG + +++SE + V LSS S S L T +P G +G+N+T++ VSD LGSTA T+LGAD P+++ S+PP+Q
Sbjct: 365 VSQEVRRKYNPSSRLVLYGCAAASLEDRCRNSSTAGFDFKWDQVDSNIEEEN-WEDVFSTESSHPTQVVRPGSLSPGRIYTFSLAATDSLGSTGYTEFAFETNAPPVGGYVVSDILRMTSGEDKALLQTAGWADDFGDLPMAYEFGYAHGRLEILSVSSE-LWVTMLSSGASYSSLLHTHLPPGTASNGFNMTMVAYVSDVLGSTAVTSLGADNEPLVLVSSPPDQ 588
BLAST of mRNA_Ecto-sp13_S_contig17910.5463.1 vs. uniprot
Match: D7G4X3_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G4X3_ECTSI) HSP 1 Score: 116 bits (291), Expect = 1.060e-23 Identity = 78/214 (36.45%), Postives = 113/214 (52.80%), Query Frame = 3
Query: 669 KYNPSEKVVLQGCASPSAEEPCSSSTSSLFNLEWKPESGNLDLSNG-WDDVFSTATSDRVLVVRKGVLGAGRTYTFSLSATDTSGQE-GYTEFSFETNAPPAGGHVESNTSSATAGVDGVRLQSMGWTDDVDDLPFTHSFGFVHGCQQEATIASESVLVNRLSSSWSASPTLRTKIPSGLVDDGYNVTILVSVSDSLGSTASTNLGADGTPMII 1304
K +P++KVV+ G S SS ++L W G+LDL W VF+TA + LV+ +G+L G TYTF LSATD + Q G+ + + NAPP GGHV ++ + A +D L+S+ WTD+VDDLP SF + + ++ S SV L P + +P G D Y + I VSDS G+TA + A G+P+ +
Sbjct: 748 KQDPTKKVVIYGSVS---------EQSSSYDLLWTQAEGDLDLEEREWSTVFATAQTGANLVIPRGLLTGGSTYTFRLSATDVASQATGFADMTLTINAPPTGGHVVASPRAGVAAIDTFVLESLDWTDEVDDLPLLFSFSY-NNEEESGQQRSLSVFAVEL-------PEWQGSLPLGPSSDNYTMLIKGHVSDSFGATAVSTSDAIGSPVTV 944
BLAST of mRNA_Ecto-sp13_S_contig17910.5463.1 vs. uniprot
Match: A0A6H5JM16_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JM16_9PHAE) HSP 1 Score: 106 bits (264), Expect = 1.900e-21 Identity = 67/165 (40.61%), Postives = 93/165 (56.36%), Query Frame = 3
Query: 1002 TAGVDGVRLQSMGWTDDVDDLPFTHSFGFVHGCQQEATIASESVLVNRLSSSWSASPTLRTKIPSGLVDDGYNVTILVSVSDSLGSTASTNLGADGTPMIISSTPPEQARLGNKYD*EGGASVLSLAYGLTCFPTDFCGNESLAYPEDTLRDARVATALLLDAPR 1496
T+G D LQ+ GW DDV DLP + FG+ HG + +++SE + V LSS S S L T +P G DGYN+T++ VSD LGSTA T+LGAD P+++ S+PP+Q L + S LS G SL P D+LR+A + +A+L P+
Sbjct: 2 TSGEDKALLQTAGWVDDVGDLPMAYEFGYAHGRLEVLSVSSE-LWVTMLSSGASYSSWLHTHLPPGTASDGYNMTVVAHVSDVLGSTAVTSLGADNEPLVLVSSPPDQVSLSSLRK---NISSLSDQRG------------SLVDPADSLREAAMFSAILEYVPQ 150
BLAST of mRNA_Ecto-sp13_S_contig17910.5463.1 vs. uniprot
Match: D7FLQ1_ECTSI (REJ domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FLQ1_ECTSI) HSP 1 Score: 104 bits (259), Expect = 4.980e-20 Identity = 59/142 (41.55%), Postives = 83/142 (58.45%), Query Frame = 3
Query: 669 KYNPSEKVVLQGCASPSAEEPCSSSTSSLFNLEWKPESGNLDLSNG-WDDVFSTATSDRVLVVRKGVLGAGRTYTFSLSATDTSGQE-GYTEFSFETNAPPAGGHVESNTSSATAGVDGVRLQSMGWTDDVDDLPFTHSFGF 1088
K +P++KVV+ G S SS ++L W G+LDL W VF+TA + LV+ +G+L G TYTF LSATD + Q G+ + + NAPP GGHV+++ + A VD L+S+ WTD+VDDLP SF +
Sbjct: 456 KQDPTKKVVIYGSVS---------EQSSSYDLLWTQAEGDLDLEEREWSTVFATAQTGANLVIPRGLLTGGSTYTFRLSATDVASQATGFADMTLTINAPPTGGHVDASPRAGVAAVDTFLLESLDWTDEVDDLPLMFSFSY 588
BLAST of mRNA_Ecto-sp13_S_contig17910.5463.1 vs. uniprot
Match: A0A6P4Z4C2_BRABE (polycystic kidney disease and receptor for egg jelly-related protein-like n=1 Tax=Branchiostoma belcheri TaxID=7741 RepID=A0A6P4Z4C2_BRABE) HSP 1 Score: 74.7 bits (182), Expect = 2.800e-10 Identity = 68/233 (29.18%), Postives = 113/233 (48.50%), Query Frame = 3
Query: 588 VHSRTTSLGDLRAPCVCLRCVCQAILRKYNPSEKVVLQG---CASPSAEEPCSSSTSSLFNLEWK---PESGNLDLSNGWDDVFSTATSDRVLVVRKGVLGAGRTYTFSLSATDTSGQEGYTEFSFETNAPPAGGHVESNTSSATAGVDGVRLQSMGWTDDVDDLPFTHSFGFVHGCQQEATIASESVLVNRLSSSWSASPTLRTKIPSGLVDDGYNVTILVSVSDSLGSTAS 1268
++S+ + +P V + C+ RK NPSE++VL C S +EP +N + P+ G DL WD +T +VV+ GV A YT ++ + G+EG+ E++F+ N PPA G + + T V + G++D DLP T++F + G ++ A++++ + V + + S +P GL YNV I VSD+LG+T+S
Sbjct: 1197 LYSQILQIFPAGSPTVQITCLSNCE-RKLNPSERLVLSSAYSCPSCRQDEPV------RYNWTLRAAPPDFGRADLL--WDTDTTTGRHLPDVVVQAGVFKAIGEYTLRVAVSLGPGREGFAEYTFQPNEPPAAGSCSVSPENGTVMVTEFTISCTGFSDL--DLPLTYTFLYSTGAERLASVSTATGDVFSILHTGQDSELSGVLLPIGLESRDYNVIIRADVSDALGATSS 1418
BLAST of mRNA_Ecto-sp13_S_contig17910.5463.1 vs. uniprot
Match: A0A329RIW5_9STRA (GPS domain-containing protein n=2 Tax=Phytophthora TaxID=4783 RepID=A0A329RIW5_9STRA) HSP 1 Score: 66.2 bits (160), Expect = 1.310e-7 Identity = 61/189 (32.28%), Postives = 92/189 (48.68%), Query Frame = 1
Query: 1 LQIAGSASWKQWRGLPLTVRTEVTSPRSQDDNVTYIWTLASEHSATEDFPPVTLTKGRNPSVLKLPAYSLGHAGSIYVFRV--AVAGSMPSTTSATATVEVISGAIIAHIFGGTMRRVGVMQDLYFNASVSVDDDQLDNSL-LQFRWNC------TDDVGEDCISPSTELLNIDSLSSGGLLTITAGTL 540
L I SAS+ G P+T T+ S D ++T+ W + F + NP +LKLPA +L G YVFR+ A+A ++ SA V V + A I G R +GV QDL +AS+SVD D + NS+ +Q+ W C T C++ + E L +D+ + +T+ A T+
Sbjct: 3047 LVITASASYPSCSG-PVTTDTDAAV--STDVDMTFTWLQVTGDLTATQFKSTS----PNPRILKLPARTLT-VGVSYVFRLVAAMASNLKVNNSADVQVGVARTDLTAMISAGN-RSIGVEQDLALDASLSVDPDDVQNSVSMQYSWTCWTLNASTQVYDVACLTATGETLTLDTQAK---ITVAASTV 3223 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig17910.5463.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 11
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig17910.5463.1 >prot_Ecto-sp13_S_contig17910.5463.1 ID=prot_Ecto-sp13_S_contig17910.5463.1|Name=mRNA_Ecto-sp13_S_contig17910.5463.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=266bp MPCWHVLCEEHVHSRTTSLGDLRAPCVCLRCVCQAILRKYNPSEKVVLQGback to top mRNA from alignment at Ecto-sp13_S_contig17910:60..3538- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig17910.5463.1 ID=mRNA_Ecto-sp13_S_contig17910.5463.1|Name=mRNA_Ecto-sp13_S_contig17910.5463.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=3479bp|location=Sequence derived from alignment at Ecto-sp13_S_contig17910:60..3538- (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig17910:60..3538- >mRNA_Ecto-sp13_S_contig17910.5463.1 ID=mRNA_Ecto-sp13_S_contig17910.5463.1|Name=mRNA_Ecto-sp13_S_contig17910.5463.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=798bp|location=Sequence derived from alignment at Ecto-sp13_S_contig17910:60..3538- (Ectocarpus species13 EcNAP12_S_4_19m)back to top |