prot_Ecto-sp13_S_contig17908.5460.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig17908.5460.1
Unique Nameprot_Ecto-sp13_S_contig17908.5460.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length316
Homology
BLAST of mRNA_Ecto-sp13_S_contig17908.5460.1 vs. uniprot
Match: A0A6H5KNI6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KNI6_9PHAE)

HSP 1 Score: 124 bits (310), Expect = 7.750e-28
Identity = 66/117 (56.41%), Postives = 80/117 (68.38%), Query Frame = 0
Query:    1 MRVNRQTPPRLWPLCTPHTTPNKSTPEVRISSRVPAVESFGLTFALPMDFLMQSSTLELGSGSECGQLTEPSSAACLRSVVWPPMLTSLVFDSNMPVNKASWPASLRRLSFGTAFNR 117
            +RV  QTPP LW     HTT N  +P+V ISSRVP V++FGLT+ALPM  L Q S  E+ SGS C +    SSAA L S VWP  L  +VF+S+M VN ASWPASL++LSFG  FN+
Sbjct:   54 VRVKPQTPPSLWFPSQNHTTTNNRSPKVCISSRVPVVQAFGLTWALPMGVLQQRSATEVRSGSGCRRANTHSSAASLESAVWPQRLKRMVFESDMTVNTASWPASLQQLSFGCGFNQ 170          
BLAST of mRNA_Ecto-sp13_S_contig17908.5460.1 vs. uniprot
Match: A0A6H5KLV1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KLV1_9PHAE)

HSP 1 Score: 102 bits (255), Expect = 3.600e-21
Identity = 58/118 (49.15%), Postives = 80/118 (67.80%), Query Frame = 0
Query:    1 MRVNRQTPPRLWPLCTPHTTPNKSTPEVRISSRVPAVESFGLTFALPMDFLMQSSTLELGSGSECGQLTEPSSAACLRSVVW-PPMLTSLVFDSNMPVNKASWPASLRRLSFGTAFNR 117
            +RV+RQTP  LW  C  H T  K + E  +S+RVPAV++ GLT+AL M+ L+Q+S +EL S S+  +++  SS A L S+ W   ML  LVFDS+MP + ASWPASL +L FG  F++
Sbjct:   62 VRVDRQTPRSLWSPCKSHATTKKRSREACVSNRVPAVQASGLTWALDMEVLLQTSAVELRSRSKYRRVSGNSSTASLGSMFWLQMMLKRLVFDSDMPASTASWPASLPQLLFGDRFDQ 179          
BLAST of mRNA_Ecto-sp13_S_contig17908.5460.1 vs. uniprot
Match: A0A6H5KLS8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KLS8_9PHAE)

HSP 1 Score: 90.9 bits (224), Expect = 1.670e-17
Identity = 47/90 (52.22%), Postives = 63/90 (70.00%), Query Frame = 0
Query:   28 VRISSRVPAVESFGLTFALPMDFLMQSSTLELGSGSECGQLTEPSSAACLRSVVWPPMLTSLVFDSNMPVNKASWPASLRRLSFGTAFNR 117
            V  SSRVPAV++FGL + LP++ L+Q +  +  +G EC + T PSSA+ L+  + PP L  L FDS+MPVN  SWPASL+ LSF T FN+
Sbjct:    6 VGTSSRVPAVQAFGLKWELPVEVLLQRAATKPRTGVECQRPTGPSSASRLQRAIRPPNLKRLEFDSDMPVNTVSWPASLQELSFDTEFNQ 95          
BLAST of mRNA_Ecto-sp13_S_contig17908.5460.1 vs. uniprot
Match: A0A6H5J7K7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J7K7_9PHAE)

HSP 1 Score: 81.3 bits (199), Expect = 6.730e-14
Identity = 43/86 (50.00%), Postives = 56/86 (65.12%), Query Frame = 0
Query:   32 SRVPAVESFGLTFALPMDFLMQSSTLELGSGSECGQLTEPSSAACLRSVVWPPMLTSLVFDSNMPVNKASWPASLRRLSFGTAFNR 117
            SRVP V++FGL   LP + L+QSS +ELGSGS    +   +SAA L S+ W   L  LV + + P NK SW ASL++LSFG  FN+
Sbjct:    2 SRVPGVQAFGLLLGLPTEVLLQSSAIELGSGSGHQHMKGHASAASLGSMSWLKKLNWLVLELDTPANKTSWAASLQQLSFGDCFNQ 87          
BLAST of mRNA_Ecto-sp13_S_contig17908.5460.1 vs. uniprot
Match: A0A6H5KJ66_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KJ66_9PHAE)

HSP 1 Score: 73.6 bits (179), Expect = 6.400e-11
Identity = 38/81 (46.91%), Postives = 55/81 (67.90%), Query Frame = 0
Query:   37 VESFGLTFALPMDFLMQSSTLELGSGSECGQLTEPSSAACLRSVVWPPMLTSLVFDSNMPVNKASWPASLRRLSFGTAFNR 117
            +++FGLT+ALPM+ L+QSS +E  SGSE       +SAA L S+ W  +   +VF+ + PV+ A WPA L++LSFG  FN+
Sbjct:    1 MQAFGLTWALPMEVLLQSSAIEQPSGSEYRHTKGHTSAASLGSMCWLQVPKRMVFEVDKPVSMAPWPACLQQLSFGDHFNQ 81          
BLAST of mRNA_Ecto-sp13_S_contig17908.5460.1 vs. uniprot
Match: A0A6H5L1V9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L1V9_9PHAE)

HSP 1 Score: 69.7 bits (169), Expect = 1.220e-9
Identity = 45/118 (38.14%), Postives = 65/118 (55.08%), Query Frame = 0
Query:    3 VNRQTPPRLWPLCTPHTTPNKSTPEVRISSRVPAVESFGLTFALPMDFLMQSSTLELGSGSECGQLTEPSSAACLRSVVWPPMLTSLVFDSNM---PVNKASWPASLRRLSFGTAFNR 117
            V+ +TPP LW L        ++ P    S+RVPAV++ GLT+A P +  + S++ EL +  E  QL      A L SVVWP  L  LV D  +   P+   SWP+SL+ L+F   F++
Sbjct:   56 VDAETPPTLWSL-------GQANPTAGTSTRVPAVQAVGLTWARPTESPLGSASSELWTRLESLQLQVSLCTANLDSVVWPQGLQRLVMDCTVFIIPLEMMSWPSSLKSLTFAGIFDQ 166          
BLAST of mRNA_Ecto-sp13_S_contig17908.5460.1 vs. uniprot
Match: A0A6H5KJ08_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KJ08_9PHAE)

HSP 1 Score: 68.9 bits (167), Expect = 2.430e-9
Identity = 35/70 (50.00%), Postives = 47/70 (67.14%), Query Frame = 0
Query:   48 MDFLMQSSTLELGSGSECGQLTEPSSAACLRSVVWPPMLTSLVFDSNMPVNKASWPASLRRLSFGTAFNR 117
            MD LMQ   ++L SGS   Q+   SSAA L   +WP  +  ++FD+++PVN  SWPASLR+LSF  AFN+
Sbjct:    1 MDVLMQKFAVQLRSGSGYRQVLRTSSAASLGLAIWPLRIKRVLFDTDVPVNTVSWPASLRQLSFVGAFNQ 70          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig17908.5460.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 7
Match NameE-valueIdentityDescription
A0A6H5KNI6_9PHAE7.750e-2856.41Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KLV1_9PHAE3.600e-2149.15Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KLS8_9PHAE1.670e-1752.22Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5J7K7_9PHAE6.730e-1450.00Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KJ66_9PHAE6.400e-1146.91Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5L1V9_9PHAE1.220e-938.14Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KJ08_9PHAE2.430e-950.00Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR008615FNIPPFAMPF05725FNIPcoord: 137..179
e-value: 1.1E-5
score: 25.5
coord: 225..266
e-value: 2.4E-5
score: 24.4
coord: 181..223
e-value: 3.5E-8
score: 33.5
NoneNo IPR availablePANTHERPTHR32134UNCHARACTERIZEDcoord: 86..199
NoneNo IPR availablePANTHERPTHR32134:SF86coord: 86..199
NoneNo IPR availablePANTHERPTHR32134:SF86coord: 181..309
NoneNo IPR availablePANTHERPTHR32134UNCHARACTERIZEDcoord: 181..309
NoneNo IPR availableSUPERFAMILY52058L domain-likecoord: 83..291

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig17908contigEcto-sp13_S_contig17908:251..1198 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig17908.5460.1mRNA_Ecto-sp13_S_contig17908.5460.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig17908 112..2369 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig17908.5460.1 ID=prot_Ecto-sp13_S_contig17908.5460.1|Name=mRNA_Ecto-sp13_S_contig17908.5460.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=316bp
MRVNRQTPPRLWPLCTPHTTPNKSTPEVRISSRVPAVESFGLTFALPMDF
LMQSSTLELGSGSECGQLTEPSSAACLRSVVWPPMLTSLVFDSNMPVNKA
SWPASLRRLSFGTAFNRPIAEVVWPASLQQLSFGVNFNRSIANAEWPASL
KRLSFGSAFNWPIAEVVWPASLQQLSFGSRFNQIITKVMWPAFLRKLSFG
NTFNQPIAGVVWPTSLQKLSFGDEFDHPIAEVVWPASLQQLSFGNTFNQP
IAGVVWPASLHQLFFGREFNQPIIGVVWPAFLQQLSFGRNFRQPIVGVEW
PATLRSVTRGGFRLP*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR008615FNIP