prot_Ecto-sp13_S_contig17904.5458.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig17904.5458.1
Unique Nameprot_Ecto-sp13_S_contig17904.5458.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length512
Homology
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BLAST of mRNA_Ecto-sp13_S_contig17904.5458.1 vs. uniprot
Match: D7FZU3_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZU3_ECTSI)

HSP 1 Score: 436 bits (1120), Expect = 2.140e-138
Identity = 266/308 (86.36%), Postives = 273/308 (88.64%), Query Frame = 0 
Query:   83 CLRRVGGAETGLAGIEAGLRAFSERVGRLETFGRAGPEQRSTEEEGQQAGGRAGEDDDEPEDVSTDLAGGAEAAATSGERTCRSPGRRHEAAAHDNDHVSADTGLDVGKERDPLSHANPWEYLRAGPPPSSSLPFHKQGGRHGLDLAERIHLLEAQVFPAISPPPPPLPVVATAAVHTGTAFSDPTKKAFSHSNGVRSAAVAQQGEGSRAAAVRGGDARRGTEPSAREERMRAIIGGLASLSTALLERLITAEGRLRNAAXXXXXXXXXXXXXXXXXXXXVDG--TDVFCQKARLMVAQAEAFLVLAS 388
            C RRVGGAETGLAGI+AGLRAFSERVGRLETFGRAGPEQRST  EGQ  GGRAGEDDD+PEDVS  LAGGAEAAATSGERTCRSPGRRHEAAAHDNDHVSADTGLDVGKERDPL+HANPWEY RAGPPPSSSLPFHKQGGR GLDLAERIHLLEAQVFPA SP         TAAV TG A S+PTKKAFS ++GVR AAV QQGE  RAAAVRGGDARRGTEPSAREERMRAIIG L SLS+ LLERLITAEGRLRNAAXXXXXXXXXXXXXXXXXXXX     TDVFCQKARLMVAQAEAFLVLAS
Sbjct:  462 CRRRVGGAETGLAGIKAGLRAFSERVGRLETFGRAGPEQRSTAGEGQPEGGRAGEDDDQPEDVSAGLAGGAEAAATSGERTCRSPGRRHEAAAHDNDHVSADTGLDVGKERDPLNHANPWEYHRAGPPPSSSLPFHKQGGRDGLDLAERIHLLEAQVFPASSPXXXXXXXAVTAAVETGAAVSNPTKKAFSRNDGVRRAAVVQQGERPRAAAVRGGDARRGTEPSAREERMRAIIGDLTSLSSVLLERLITAEGRLRNAAXXXXXXXXXXXXXXXXXXXXXXXXXTDVFCQKARLMVAQAEAFLVLAS 769
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BLAST of mRNA_Ecto-sp13_S_contig17904.5458.1 vs. uniprot
Match: A0A6H5KJ46_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KJ46_9PHAE)

HSP 1 Score: 419 bits (1077), Expect = 7.390e-133
Identity = 246/301 (81.73%), Postives = 256/301 (85.05%), Query Frame = 0 
Query:   85 RRVGGAETGLAGIEAGLRAFSERVGRLETFGRAGPEQRSTEEEGQQAGGRAGEDDDEPEDVSTDLAGGAEAAATSGERTCRSPGRRHEAAAHDNDHVSADTGLDVGKERDPLSHANPWEYLRAGPPPSSSLPFHKQGGRHGLDLAERIHLLEAQVFPAISPPPPPLPVVATAAVHTGTAFSDPTKKAFSHSNGVRSAAVAQQGEGSRAAAVRGGDARRGTEPSAREERMRAIIGGLASLSTALLERLITAEGRLRNAAXXXXXXXXXXXXXXXXXXXXVDGTDVFCQKARLMVAQAEAFLV 385
            RRVGGAETGLA I+AGLRAFSERVGRLETFGRA PEQRST  EGQQAGGRAGE+DD+PEDVST LAGGAEAAAT+ ERTCRS GRRHE AAHDNDHVSADTG+D+GKERDPLSHANP EY RA PPPSSSLPFHKQGGRHGLDLAERIHLLEAQVFPA+SP      VV TA V TG   SDPTK+AFSHS+GV+SAAV QQGE SRAAAVRGGDARRGTEP AREERMRAIIG LASLS ALLERLITAEGRLRNAAXXXXXXXX                DV CQKARLMVAQAEAFLV
Sbjct:  381 RRVGGAETGLASIKAGLRAFSERVGRLETFGRADPEQRSTAGEGQQAGGRAGENDDQPEDVSTGLAGGAEAAATASERTCRSAGRRHEVAAHDNDHVSADTGIDMGKERDPLSHANPREYHRARPPPSSSLPFHKQGGRHGLDLAERIHLLEAQVFPAMSPXXXXXQVVETAPVETGAVLSDPTKRAFSHSDGVKSAAVVQQGEQSRAAAVRGGDARRGTEPLAREERMRAIIGDLASLSAALLERLITAEGRLRNAAXXXXXXXX----------------DVLCQKARLMVAQAEAFLV 665
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig17904.5458.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7FZU3_ECTSI2.140e-13886.36Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KJ46_9PHAE7.390e-13381.73Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig17904contigEcto-sp13_S_contig17904:6..1667 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig17904.5458.1mRNA_Ecto-sp13_S_contig17904.5458.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig17904 6..1667 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig17904.5458.1 ID=prot_Ecto-sp13_S_contig17904.5458.1|Name=mRNA_Ecto-sp13_S_contig17904.5458.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=512bp
DEVTITVYAGGGSGGGGDDGGDDESTRAAAAAAANRGRATPSSSEGNDAG
DGGKGGGSGPDDGGGLVESTRGLGGGGGKGGGCLRRVGGAETGLAGIEAG
LRAFSERVGRLETFGRAGPEQRSTEEEGQQAGGRAGEDDDEPEDVSTDLA
GGAEAAATSGERTCRSPGRRHEAAAHDNDHVSADTGLDVGKERDPLSHAN
PWEYLRAGPPPSSSLPFHKQGGRHGLDLAERIHLLEAQVFPAISPPPPPL
PVVATAAVHTGTAFSDPTKKAFSHSNGVRSAAVAQQGEGSRAAAVRGGDA
RRGTEPSAREERMRAIIGGLASLSTALLERLITAEGRLRNAAAAGGGGFH
GNDGGCGGGGGGVDGTDVFCQKARLMVAQAEAFLVLASTGDDAATAQPPA
PPPTTTTQDTQGGEKAVAPSADDASTGITTAALALPEGGAAPLRSGQSMV
IPALLCPPPPPLPRQAKPPGAAGSPARPSSPQPPPAAAVAAMPLSGRANG
GENPLAIRRRRR
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