mRNA_Ecto-sp13_S_contig17901.5457.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp13_S_contig17901.5457.1
Unique NamemRNA_Ecto-sp13_S_contig17901.5457.1
TypemRNA
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Homology
BLAST of mRNA_Ecto-sp13_S_contig17901.5457.1 vs. uniprot
Match: A0A6H5KWV7_9PHAE (Lipase_3 domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KWV7_9PHAE)

HSP 1 Score: 573 bits (1476), Expect = 2.700e-204
Identity = 280/293 (95.56%), Postives = 287/293 (97.95%), Query Frame = 1
Query:    1 MSKLVYSPRIEVERAMQGKDGLGFEHFHWFEADPAVSGASVWDRIQDTEAFVAANDDVILVVFRGSSELTDWTTNFNLVRRLVPSDWGLDGLGCDVHQGFDDGVETVWNPGSAHPSGMRNIIKTLCKEEGKNRKLYLAGHSLGGALATVAAARLAFMDDVKISGMYTIGSPRRVFGENMADRFDAKLNDGTRMKDKYFRCRNNNDLVTRGPLRPYKHVGTEIYFDRFGGLSTSTLLDRILGRFSALLRFSLVDGSNDHGAGEYIRLFKQTVIDERVSLLDKAKSLAADAVQKV 879
            MSKLVYSPRIEVE AMQGKDGLG+EHFHWFEADPAVSGAS+WDRIQDTEAFVAANDDVILVVFRGSSELTDWTTNFNLVRRLVPSDW LDGLGCDVHQGFDD VETVWNPGSAHPSGMRNIIKTLCKEEGK+RKLYLAGHSLGGALATVAAARLAFMDDVKISG+YTIGSPR VFGENMADRF+AK+NDGTRMKDKYFRCRNNNDLVTRGPLRPYKHVGTEIYFDRFGGLSTSTLLDRILGRFSALLRFSLVDG+NDHGAGEYIRLFKQTVIDERV LLDKAKSLA DAVQKV
Sbjct:   79 MSKLVYSPRIEVESAMQGKDGLGYEHFHWFEADPAVSGASIWDRIQDTEAFVAANDDVILVVFRGSSELTDWTTNFNLVRRLVPSDWLLDGLGCDVHQGFDDAVETVWNPGSAHPSGMRNIIKTLCKEEGKHRKLYLAGHSLGGALATVAAARLAFMDDVKISGIYTIGSPR-VFGENMADRFNAKMNDGTRMKDKYFRCRNNNDLVTRGPLRPYKHVGTEIYFDRFGGLSTSTLLDRILGRFSALLRFSLVDGANDHGAGEYIRLFKQTVIDERVPLLDKAKSLAVDAVQKV 370          
BLAST of mRNA_Ecto-sp13_S_contig17901.5457.1 vs. uniprot
Match: A0A6H5L4H8_9PHAE (Lipase_3 domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5L4H8_9PHAE)

HSP 1 Score: 360 bits (923), Expect = 1.160e-120
Identity = 177/298 (59.40%), Postives = 216/298 (72.48%), Query Frame = 1
Query:    1 MSKLVYSPRIEVERAMQ-----GKDGLGFEHFHWFEADPAVSGASVWDRIQDTEAFVAANDDVILVVFRGSSELTDWTTNFNLVRRLVPSDWGLDGLGCDVHQGFDDGVETVWNPGSAHPSGMRNIIKTLCKEEGKNRKLYLAGHSLGGALATVAAARLAFMDDVKISGMYTIGSPRRVFGENMADRFDAKLNDGTRMKDKYFRCRNNNDLVTRGPLRPYKHVGTEIYFDRFGGLSTSTLLDRILGRFSALLRFSLVDGSNDHGAGEYIRLFKQTVIDERVSLLDKAKSLAADAVQKV 879
            MS L Y  + EV  A++     GK     ++F WFEA+  V   S +D I DTEAFVAAND  I+V FRGSS   DW TNF+++ R +P DW L+    D+H+GFDDGV TVWNPG  HP GM  +IK    EEG++RKLY+ GHSLGGALAT+AAARL F+DD+ ++ +YTIGSPR VF   +A  FD+K N GTRMKDKYFRCRNNND+V+  P  PYKHVGTE+YFDRFG +ST  LLDR+LGR+SALLRFS +DG NDH   EYIRLF+Q V+  R+SLL K +S+  DAVQKV
Sbjct:   48 MSDLCYQSKDEVRSALETLSFWGKGAAAGDNFQWFEANDEVVDRSSFDPIHDTEAFVAANDGAIVVAFRGSSGGRDWLTNFSILPRDIPKDWKLETTDGDLHRGFDDGVNTVWNPGPGHPEGMLAVIKRFYHEEGRSRKLYITGHSLGGALATIAAARLVFVDDLNVAALYTIGSPR-VFDSEVAAIFDSKTNHGTRMKDKYFRCRNNNDIVSCIPPSPYKHVGTEVYFDRFGAMSTHNLLDRLLGRWSALLRFSFIDGVNDHSRSEYIRLFEQAVVSSRLSLLVKTRSVVVDAVQKV 344          
BLAST of mRNA_Ecto-sp13_S_contig17901.5457.1 vs. uniprot
Match: D8LDK8_ECTSI (Putative lipase n=2 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LDK8_ECTSI)

HSP 1 Score: 326 bits (835), Expect = 7.000e-108
Identity = 167/295 (56.61%), Postives = 214/295 (72.54%), Query Frame = 1
Query:    1 MSKLVYSPRIEVERAMQGK---DGLGFEHFHWFEADPAVSGASVWDRIQDTEAFVAANDDVILVVFRGSSELTDWTTNFNLVRRLVPSDWGL-DGLGCDVHQGFDDGVETVWNPGSAHPSGMRNIIKTLCKEEGKNRKLYLAGHSLGGALATVAAARLAFMDDVKISGMYTIGSPRRVFGENMADRFDAKLNDGTRMKDKYFRCRNNNDLVTRGPLRP-YKHVGTEIYFDRFGGLSTSTLLDRILGRFSALLRFSLVDGSNDHGAGEYIRLFKQTVIDERVSLLDKAKSLAADAV 870
            + K+ Y P  E +  ++G    DGLGF+ FHWF+AD A   +S +D IQDTEAFVAANDD++ VVFRG+ ELTDW TN ++  R     W   D +G  VH+GF++GV++VW         MR +IK L  E+GK+RKLY+AGHSLGGALATVAAARL+++D++ I+G+YTIGSPR +F  + A  FD+++NDGT +K+KYFRCRNNND+VTR PL P Y+HVGTEIY DRFG +STS+  DRILGR SAL R  L+DG +DH   EYIR FKQ VI+ +V   DKAKS   DA+
Sbjct:   21 LCKIAYKPEQEAKGLVKGNSTNDGLGFDRFHWFDADEAAKRSS-FDAIQDTEAFVAANDDMVAVVFRGTKELTDWATNLDISPRDCAEQWEAPDAVGA-VHEGFNEGVDSVWEV----RGNMRKVIKNLYNEKGKDRKLYIAGHSLGGALATVAAARLSYIDNLDIAGVYTIGSPR-LFDPSAAAGFDSRMNDGTPLKEKYFRCRNNNDIVTRIPLPPSYEHVGTEIYLDRFGAISTSSFADRILGRLSALCRGELIDGVDDHSTSEYIRHFKQDVINAKVPAFDKAKSTCCDAI 308          
BLAST of mRNA_Ecto-sp13_S_contig17901.5457.1 vs. uniprot
Match: A0A6H5JMK4_9PHAE (Lipase_3 domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JMK4_9PHAE)

HSP 1 Score: 278 bits (711), Expect = 1.140e-87
Identity = 145/294 (49.32%), Postives = 189/294 (64.29%), Query Frame = 1
Query:    1 MSKLVYSPRIEVERAMQG---KDGLGFEHFHWFEADPAVSGASVWDRIQDTEAFVAANDDVILVVFRGSSELTDWTTNFNLVRRLVPSDWGLDGLGCDVHQGFDDGVETVW-NPGSAHPSGMRNIIKTLCKEEGKNRKLYLAGHSLGGALATVAAARLAFMDDVKISGMYTIGSPRRVFGENMADRFDAKLNDGTRMKDKYFRCRNNNDLVTRGPLRPYKHVGTEIYFDRFGGLSTSTLLDRILGRFSALLRFSLVDGSNDHGAGEYIRLFKQTVIDERVSLLDKAKSLAADAV 870
            +SK+ Y+   E    + G   + GLGF+ FHWFE        + +  + DT+AFVAA+DD+I VVFRG+  + DW TN  +  +  P +W +   G  VH GFDD V TVW +  S  P+GM   I  L  E+GKNRKL+ AGHSLGGALAT AAAR+AF+DD+ I+G+YTIGSPR +F       FD + N G  +K+KYFRCRNN D V   P RPY HVGTEIY D+ G +S +++ DRIL +    LRF  + G +DH   EYIRLFKQ V++ RV L+DKA S+  DA+
Sbjct:  113 LSKIAYASEDEARGLLVGNATERGLGFDRFHWFEGGEEAR-KNPFGNLHDTDAFVAASDDIIAVVFRGTMGIADWYTNAKVQPKKCPQEWRVPPPGGTVHTGFDDAVGTVWLSTPSGQPTGMYQAIMDLYNEKGKNRKLFFAGHSLGGALATNAAARVAFIDDLDIAGIYTIGSPR-LFNRVAGRHFDGRPNGGKTLKEKYFRCRNNKDPVPTVPKRPYVHVGTEIYIDKCGTISMASMADRILDQLLWWLRFEYIRGIDDHSTSEYIRLFKQIVLNSRVPLMDKAISVVMDAL 404          
BLAST of mRNA_Ecto-sp13_S_contig17901.5457.1 vs. uniprot
Match: D8LDL1_ECTSI (Lipase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LDL1_ECTSI)

HSP 1 Score: 198 bits (503), Expect = 2.450e-58
Identity = 97/158 (61.39%), Postives = 120/158 (75.95%), Query Frame = 1
Query:   91 EADPAVSGASVWDRIQDTEAFVAANDDVILVVFRGSSELTDWTTNFNLVRRLVPSDWGLDGLGCDVHQGFDDGVETVWNPGSAHPSGMRNIIKTLCKEEGKNRKLYLAGHSLGGALATVAAARLAFMDDVKISGMYTIGSPRRVFG-ENMADRFDAKL 561
            EADPAVSG S+ D I DTEAFV ANDD+I+VVFRG+ ELTDWTTN N+  R   ++W +D  GCD+H+GFDDGV+TVW P S +  GM   IK L  E GK+RKLY+AGHSLGGALAT+AAARL+F+DD+ I+G+YTIGSPR      N+ DR   ++
Sbjct:   59 EADPAVSGRSILDAIHDTEAFVTANDDMIVVVFRGTQELTDWTTNLNMGLRSARNEWKIDLEGCDLHRGFDDGVDTVWLPSSKN--GMYQTIKNLYNEHGKSRKLYIAGHSLGGALATIAAARLSFVDDMNIAGIYTIGSPRGAISTSNVWDRLLGRM 214          
BLAST of mRNA_Ecto-sp13_S_contig17901.5457.1 vs. uniprot
Match: A0A1V4AQB0_9BACT (Lipase_3 domain-containing protein n=1 Tax=Candidatus Brocadia caroliniensis TaxID=1004156 RepID=A0A1V4AQB0_9BACT)

HSP 1 Score: 129 bits (324), Expect = 2.770e-32
Identity = 93/278 (33.45%), Postives = 134/278 (48.20%), Query Frame = 1
Query:    4 SKLVYSPRIEVERAMQGKDGLGFEHFHWFEADPAVSGASVWDRIQDTEAFVAANDDVILVVFRGSSELTDWTTNFNLVRRLVPSDWGLDGLGCDVHQGFDDGVETVWNPGSAHPSGMRNIIKTLCKEEGKNRKLYLAGHSLGGALATVAAARLAFMDDVKISGMYTIGSPR---RVFGENMADRFDAKLNDGTRMKDKYFRCRNNNDLVTRGPLRP--YKHVGTEIYFDRFGGLSTST-----LLDRILGRFSALLRFSLVDGSNDHGAGEYIRLFKQ 807
            S+L Y    ++    QG    GF  F ++E            +  DT+AF+A N +++++ FRG++ L DW T+ N+   L+    G DG    VH+GF   + +VW             I +  + E K R L++ GHSLG ALAT+A A+L    D  ++G+YT G PR   R F +N    FDA     T      FR   NND+V R P R   Y HVGT  Y D+ G +S        + DR+ GR   LL+    DG  DH    Y++  ++
Sbjct:   25 SQLAYENESKIS---QGIQAWGFNDFKYYE-----------HKKLDTQAFIAGNQEMLMLAFRGTASLKDWMTDINI--DLIN---GPDGK---VHEGFSMAISSVWRD-----------IWSFIRNERKGRALWITGHSLGAALATLAVAKLRLEKDEPVNGLYTFGQPRTGDREFQKN----FDADFVSQT------FRFVYNNDIVARIPFRSMHYSHVGTFKYIDKKGTISEDISWWDIIADRVHGRIEDLLKPG-TDGIKDHAIDNYVKFLEK 258          
BLAST of mRNA_Ecto-sp13_S_contig17901.5457.1 vs. uniprot
Match: UPI0016886C83 (Lipase family protein n=2 Tax=Leptolyngbya sp. FACHB-261 TaxID=2692806 RepID=UPI0016886C83)

HSP 1 Score: 129 bits (325), Expect = 7.540e-32
Identity = 85/227 (37.44%), Postives = 121/227 (53.30%), Query Frame = 1
Query:  136 QDTEAFVAANDDVILVVFRGSSELTDWTTNFNLVRRLVPSDWGLDGLGCDVHQGFDDGVETVWNPGSAHPSGMRNIIKTLCKEEGKNRKLYLAGHSLGGALATVAAARLAFMDDVKISGMYTIGSPRRVFGENMADRFDAKLNDGTRMKDKYFRCRNNNDLVTRGPLRP--YKHVGTEIYFDRFGGLST-----STLLDRILGRFSALLRFSLVDGSNDHGAGEYIR 795
            QDT+AFVAAND ++++ FRG+++  DW TN  +  +          +G  VH+GF + ++ VW            ++ TL   + KN+ L++ GHSLGGALAT+A ARL F     ++G+YT GSPR V  E  AD F+         K + FR  +NND+VTR P R   Y HVGT +Y D  G +       +  L  + GR S  L+    DG  DH   +Y +
Sbjct:   95 QDTQAFVAANDQIVVLSFRGTTDRNDWATNIGVAFKEETK------IG-KVHEGFLEALDCVWP----------RVMTTLDAFQDKNQSLWITGHSLGGALATLATARLRFGLKRPVAGLYTFGSPRAV-DEAFADTFNHDF------KAQTFRLVHNNDVVTRVPPRSFGYSHVGTFLYIDPKGRIHQDIRFWNNFLANVQGRMSDFLKPG-TDGFKDHDIAKYAK 296          
BLAST of mRNA_Ecto-sp13_S_contig17901.5457.1 vs. uniprot
Match: A0A5J6PIS2_9GAMM (Lipase family protein n=1 Tax=Cellvibrio sp. KY-GH-1 TaxID=2303332 RepID=A0A5J6PIS2_9GAMM)

HSP 1 Score: 127 bits (318), Expect = 2.010e-31
Identity = 88/230 (38.26%), Postives = 118/230 (51.30%), Query Frame = 1
Query:  136 QDTEAFVAANDDVILVVFRGSSELTDWTTN--FNLVRRLVPSDWGLDGLGCDVHQGFDDGVETVWNPGSAHPSGMRNIIKTLCKEEGKNRKLYLAGHSLGGALATVAAARLAFMDDVKISGMYTIGSPRRVFGENMADRFDAKLNDGTRMKDKYFRCRNNNDLVTRGPLR--PYKHVGTEIYFDRFGGLSTST-----LLDRILGRFSALLRFSLVDGSNDHGAGEYIRL 798
            +D +AF+A ND  I++ FRG+S + DW TN  F+L            G+G  VH+GF D +  VWN          +I + L + + K + L++ GHSLGGALAT+AAA  A + D  + G+YT G PR V     +  FDA L      K ++FR  NN+D+VTR P R   Y HVG   +FD  G L          L+ + G F   L   L D   DH    YIRL
Sbjct:   51 RDIQAFIAYNDSDIVLSFRGTSSIEDWMTNAAFDLTSFA-------GGIG-KVHRGFSDALYLVWN----------DITQILARVQTKAQALWITGHSLGGALATLAAAHFALVLDKPVRGIYTFGQPR-VGNREFSRNFDADL------KGRFFRFVNNSDIVTRIPTRVMSYSHVGALRFFDAKGDLHDDVSYWQEFLETVKGTFDEFLTI-LPDNIEDHLMKNYIRL 254          
BLAST of mRNA_Ecto-sp13_S_contig17901.5457.1 vs. uniprot
Match: UPI000375BB5B (lipase family protein n=1 Tax=Pseudanabaena sp. PCC 6802 TaxID=118173 RepID=UPI000375BB5B)

HSP 1 Score: 125 bits (314), Expect = 8.960e-31
Identity = 93/282 (32.98%), Postives = 141/282 (50.00%), Query Frame = 1
Query:    4 SKLVYSPR--IEVERAMQGKDGLGFEHFHWFEADPAVSGASVWDRIQDTEAFVAANDDVILVVFRGSSELTDWTTN--FNLVRRLVPSDWGLDGLGCDVHQGFDDGVETVWNPGSAHPSGMRNIIKTLCKEEGKNRKLYLAGHSLGGALATVAAARLAFMDDVKISGMYTIGSPRRVFGENMADR-FDAKLNDGTRMKDKYFRCRNNNDLVTRGPLRP--YKHVGTEIYFDRFGGLSTST-----LLDRILGRFSALLRFSLVDGSNDHGAGEYIRLFKQTV 813
            ++LVYS    I+ E A       GF  F +F+ +              T+AF  AND++ +V  RGS E+ DW TN  FNLV          DG+G  VHQGF+  +  V+           +I +T+ + + K + L+  GHSLGGALAT+A A+L + +D  + G+YT G PR   G+   +R F+A        K + FR  N+ND+V+R P R   Y HVGT +YFD  G + +        LD +    + L + ++ D   DH    Y++  ++ +
Sbjct:   25 ARLVYSDSKTIQAETAT-----WGFSKFRFFDKE-------------GTQAFAIANDELAIVALRGSEEVIDWVTNAKFNLV----------DGMGGKVHQGFNQALTLVY----------ADIRQTITEFQDKGQSLWFTGHSLGGALATLAVAKLRYEEDKPVYGLYTYGQPRS--GDRNFERIFNADF------KSRTFRFVNHNDIVSRIPPRSLSYSHVGTFLYFDEQGNIHSDAAWWYRFLDLVKVDINDLQK-TVNDPIEDHEMDRYLKNLQKNI 259          
BLAST of mRNA_Ecto-sp13_S_contig17901.5457.1 vs. uniprot
Match: A0A1G2Y2E3_9BACT (Lipase_3 domain-containing protein n=1 Tax=Planctomycetes bacterium GWF2_39_10 TaxID=1801955 RepID=A0A1G2Y2E3_9BACT)

HSP 1 Score: 124 bits (311), Expect = 2.190e-30
Identity = 95/274 (34.67%), Postives = 132/274 (48.18%), Query Frame = 1
Query:    4 SKLVYSPRIEVERAMQGKDGLG-FEHFHWFEADPAVSGASVWDRIQDTEAFVAANDDVILVVFRGSSELTDWTTNFNLVRRLVPSDWGLDGLGCDVHQGFDDGVETVWNPGSAHPSGMRNIIKTLCKEEGKNRKLYLAGHSLGGALATVAAARLAFMDDVKISGMYTIGSPR---RVFGENMADRFDAKLNDGTRMKDKYFRCRNNNDLVTRGPLRP--YKHVGTEIYFDRFGGLSTST-----LLDRILGRFSALLRFSLVDGSNDHGAGEYI 792
            S++ Y P  E  ++  G  GL  FE+F+                 +DT+ F+A N +V+L+ FRG+  L DW T+ ++   LV       G G  VH GF + +  VW          R+I + + + + + R L++ GHSLG ALAT+A A+L    D  ++G+YT G PR   R F +N    F A+           FR  NNND+VTR P R   Y HVGT  YFD  G           L+DR+ GR   LL     DG  DHG   Y+
Sbjct:   25 SQIAYKPSREA-KSDTGSWGLNEFEYFNH----------------RDTQGFLAGNKEVLLLAFRGTENLRDWMTDLDM--DLV------GGPGGKVHDGFLNALGYVW----------RDIWQFI-RTQRQRRSLWVTGHSLGAALATLAVAKLRLEKDEAVNGLYTFGQPRTGDREFAKNFDIDFAAQT----------FRYVNNNDIVTRVPFRSMHYSHVGTYKYFDENGNQRDDISWWDKLVDRVKGRVEDLLEPG-TDGIKDHGIANYV 251          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig17901.5457.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KWV7_9PHAE2.700e-20495.56Lipase_3 domain-containing protein n=2 Tax=Ectocar... [more]
A0A6H5L4H8_9PHAE1.160e-12059.40Lipase_3 domain-containing protein n=2 Tax=Ectocar... [more]
D8LDK8_ECTSI7.000e-10856.61Putative lipase n=2 Tax=Ectocarpus siliculosus Tax... [more]
A0A6H5JMK4_9PHAE1.140e-8749.32Lipase_3 domain-containing protein n=2 Tax=Ectocar... [more]
D8LDL1_ECTSI2.450e-5861.39Lipase n=1 Tax=Ectocarpus siliculosus TaxID=2880 R... [more]
A0A1V4AQB0_9BACT2.770e-3233.45Lipase_3 domain-containing protein n=1 Tax=Candida... [more]
UPI0016886C837.540e-3237.44Lipase family protein n=2 Tax=Leptolyngbya sp. FAC... [more]
A0A5J6PIS2_9GAMM2.010e-3138.26Lipase family protein n=1 Tax=Cellvibrio sp. KY-GH... [more]
UPI000375BB5B8.960e-3132.98lipase family protein n=1 Tax=Pseudanabaena sp. PC... [more]
A0A1G2Y2E3_9BACT2.190e-3034.67Lipase_3 domain-containing protein n=1 Tax=Plancto... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig17901contigEcto-sp13_S_contig17901:204..3331 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop0
Start1
Seed ortholog score576.2
Seed ortholog evalue8.4e-162
Seed eggNOG ortholog2880.D8LDK4
Model size879
Hectar predicted targeting categoryother localisation
GOsGO:0005575,GO:0005576,GO:0005615,GO:0044421
Exons5
EggNOG free text desc.phospholipase A1 activity
EggNOG OGsKOG4569@1,KOG4569@2759
Ec32 ortholog descriptionLipase domain protein
Ec32 orthologEc-15_000230.1
Cds size879
COG Functional cat.G
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681462927.0652852-CDS-Ecto-sp13_S_contig17901:203..4021681462927.0652852-CDS-Ecto-sp13_S_contig17901:203..402Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig17901 204..402 -
1681462927.0759096-CDS-Ecto-sp13_S_contig17901:1014..11791681462927.0759096-CDS-Ecto-sp13_S_contig17901:1014..1179Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig17901 1015..1179 -
1681462927.0846255-CDS-Ecto-sp13_S_contig17901:1619..18401681462927.0846255-CDS-Ecto-sp13_S_contig17901:1619..1840Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig17901 1620..1840 -
1681462927.0929663-CDS-Ecto-sp13_S_contig17901:2394..25951681462927.0929663-CDS-Ecto-sp13_S_contig17901:2394..2595Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig17901 2395..2595 -
1681462927.1011248-CDS-Ecto-sp13_S_contig17901:3238..33311681462927.1011248-CDS-Ecto-sp13_S_contig17901:3238..3331Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig17901 3239..3331 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig17901.5457.1prot_Ecto-sp13_S_contig17901.5457.1Ectocarpus species13 EcNAP12_S_4_19mpolypeptideEcto-sp13_S_contig17901 204..3331 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp13_S_contig17901.5457.1

>prot_Ecto-sp13_S_contig17901.5457.1 ID=prot_Ecto-sp13_S_contig17901.5457.1|Name=mRNA_Ecto-sp13_S_contig17901.5457.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=293bp
MSKLVYSPRIEVERAMQGKDGLGFEHFHWFEADPAVSGASVWDRIQDTEA
FVAANDDVILVVFRGSSELTDWTTNFNLVRRLVPSDWGLDGLGCDVHQGF
DDGVETVWNPGSAHPSGMRNIIKTLCKEEGKNRKLYLAGHSLGGALATVA
AARLAFMDDVKISGMYTIGSPRRVFGENMADRFDAKLNDGTRMKDKYFRC
RNNNDLVTRGPLRPYKHVGTEIYFDRFGGLSTSTLLDRILGRFSALLRFS
LVDGSNDHGAGEYIRLFKQTVIDERVSLLDKAKSLAADAVQKV
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mRNA from alignment at Ecto-sp13_S_contig17901:204..3331-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp13_S_contig17901.5457.1 ID=mRNA_Ecto-sp13_S_contig17901.5457.1|Name=mRNA_Ecto-sp13_S_contig17901.5457.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=3128bp|location=Sequence derived from alignment at Ecto-sp13_S_contig17901:204..3331- (Ectocarpus species13 EcNAP12_S_4_19m)
ATGAGCAAGCTTGTGTACTCTCCCCGGATTGAGGTCGAGAGAGCAATGCA GGGCAAGGACGGCTTGGGGTTCGAGCATTTCCACTGGTTCGAGGTAAGAA GGGGCGTTGGAGGCAACGCGGTGTTTTTGGTTGGGCCGCTGGGGAACCGT TGGGCTTGTTTTTGGGGCATGCTCTTTGACAGAGCAAGGCGCGCTCATGC ATGTCTATGAAACGGGTGATGGTTTCATCTCATCTACGTAAAGTTCTGCA CATTTACAAGTTTTCTGCACACTTGGAATCGGCCGGGCGCACCATAAAGT CATCAACTGATACAACAGCAATACCTCGACAGCCGAAATTGAAGCCACGA AGATATCCTGTAAAATTTCCGCATCCCAGCAACATAATTTTCGAGCTCGC AGAACGCGAACACGCTTGCCTGTCTTCCGCGTTGCCACTATGCGGTAAGT TTATCCGTGGGAATACGAGCTCAAGAGTGTATCTCGGAATCTCACGCCCA CACCAAGCACTAGCGCTCAGAAAATGAACTTCTTTTTTTTTTCTGCACGA TGCATACCTCTTGGAGGAGGAGATCCGTGTTTGATTCTCGAGCTCTTGAC AACAACGGATCGGTCTACAGCCTCCATTGGAAATCTTCTTGCGAATACTG AGTCAATAAGGCCTTGGCATGGTTCTCCGCCATCGCGCGTGACGTCTTAA CGTGACTCGTAAATACGTGCGCTGGCGCAAGGAAAGGCGGACCCGGCGGT GTCGGGAGCATCGGTTTGGGACCGCATCCAAGACACGGAGGCGTTCGTGG CGGCGAACGATGACGTCATACTGGTGGTGTTCCGCGGCTCGAGCGAACTC ACGGACTGGACGACGAACTTCAACCTGGTCCGCCGACTCGTCCCGAGCGA CTGGGGCCTGGACGGTCTCGGCTGCGACGTGCACCAGGTGAAACTACTAT ATCAGCAGTGATACTACTGTGCTGTTCCCAAAAGGTGCACTTTTTTCTGT GGGTACAACAGTGAGGTAGGTATGCACCTCTCCATACAGTAGTGAACCGT CAATAACGCCGGTTTAATGATGCCGGTGGCCCAATTTTTTGCCGGTGAAA ATTGCGGGGCACAAGGACCAAGTCAGTCTGTACATTGAATAGCGCCGGTC CCTCTGAAGAGGACCGGTCGATTCGCCGGGTACATAACAGCGTTTTCGAG GGCCCACTACCTGTACCATCCGAAGTGTGTACTTTTGCCTGTGGGTATTT CCGTAGTTCGTTTTCTTTCCGTTTCATGGTCTGATGTTGGATTCGCCCCT GACTGGGGCTACGATACTCACCCGTTGCGCCGAGTCTATCTTACTGCGAC ACTCGCATATGTCCACGTCCTTGGGATGCGTACATCCCACAAAGCAGACG TTGAGAGCTAATACACAAAGAAAACTGCCCAAAAAAGGCAAGCTTTCGCA CTAACGCCCCAGCCTATCTCACCCACCCTCTGAGTGGACAGGGCTTCGAC GATGGGGTGGAGACAGTATGGAACCCGGGCTCCGCTCACCCCTCGGGCAT GCGTAACATCATCAAGACCCTCTGCAAAGAGGAAGGCAAGAACCGCAAGC TGTACCTCGCCGGGCACTCTCTGGGAGGCGCCCTGGCCACCGTCGCGGCG GCCCGCCTGGCGTTCATGGACGACGTGAAGATATCTGGGATGTACACCAT CGGGAGCCCCAGGTGAGAAGAGGCCACGAAGTGCGAAAAGAGGTGCGCGC AAGGGTTGGTGGGGCCGCTTTTCTTCAAGCTCTTCTCCCTTGAATAACGC GTTTTTTCTTCTCATACATAGCATAGCGTCTGTGGACGACAGCATGGACA TGCCGGAGAGCTTGGCATCCGCAGCCCTCTAGTCCAGGTCTAGACTCATT CTTCGGTACGCGCAGTTAACCAGTGGCATCGCAACGAGGACGTTGCGGGG ATGGTTTCGATGAGCACTCCTACGTTTCGTGAAAAAAACAGCATTATCCC TCCACACTTTGGGGCTATAGACTGGGTGGAGTTGCCGGGACATGATGGGT TGTGAGCCTATGTATGACAAACCTTGTTAACACTTCGCACATATCCCGAA TTTTGATGCCGCCGTGCGCATATCTACCTCGTTGTTTGTTGTTCTTGGCG AGAAGGGTGTTCGGTGAAAACATGGCCGACCGCTTCGACGCCAAGTTGAA CGACGGCACGCGGATGAAGGACAAGTACTTCCGCTGCAGGAACAACAACG ATCTGGTCACGCGCGGCCCTCTTCGTCCTTACAAGCACGTCGGCACGGAG ATCTACTTCGACCGATTGTAAGAACTTTTCTGGTCGTTCCCCCTCGACGA AGTTGTGTTGGGCTGATGTTGAAGGCTATTTTCATGTTGACACCGTCGCC AACGACGGGAACGGTGTTAAGGATACTTACTCTTGAATGTTGGCGCACCT GTGTTACGGAGTGGCCCCTGTCGGGGCCTGCACATGAGTAGTACTTGGTG ATACGTACGTACTACTCTGGCTGTGTTCTAACTTCACATTTTACGATGTT TAGCTCTTTTCAAATGGGTTCTACGCCTGTTGAGTAACATGTGTTTTGTG TTCAACGACTGAACGAGGCTCCTCCCGTACGTCACGCCAGCTCGATGTTC ATTCGGTCGATAGGGGGGAGATGCTTGAAGTCGTACCGTATACTGATTCA ACCAACGTCCGGAAAAAGTTTTATCTATTGTTCATGGTTAATAAAGCCTT GTTATGGCCCCACTACATGGTACAGATTTTTATGTCGTATATGTAGCCTC CAGACGAAATCGTCCACCCTAGGGGCATAGCATGTCGGTGGTGGCCCCGC CATCCAAAGAGGCGACGGTCTTCATTCTTGCAGCCCCCTTAGTCTCTGCC TGAATTTCCTGACGCTGCGTCCGGTACAGCGGCGGCCTCTCGACGAGTAC GCTCTTGGACCGCATTCTCGGCCGGTTCAGCGCGCTTTTGAGGTTCTCCT TGGTCGACGGCTCCAACGACCACGGCGCCGGAGAGTACATCCGACTCTTC AAGCAAACCGTCATCGATGAGAGGGTGTCGCTTCTGGACAAGGCCAAGAG CTTGGCGGCGGACGCCGTGCAGAAGGTG
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Coding sequence (CDS) from alignment at Ecto-sp13_S_contig17901:204..3331-

>mRNA_Ecto-sp13_S_contig17901.5457.1 ID=mRNA_Ecto-sp13_S_contig17901.5457.1|Name=mRNA_Ecto-sp13_S_contig17901.5457.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=879bp|location=Sequence derived from alignment at Ecto-sp13_S_contig17901:204..3331- (Ectocarpus species13 EcNAP12_S_4_19m)
ATGAGCAAGCTTGTGTACTCTCCCCGGATTGAGGTCGAGAGAGCAATGCA
GGGCAAGGACGGCTTGGGGTTCGAGCATTTCCACTGGTTCGAGGCGGACC
CGGCGGTGTCGGGAGCATCGGTTTGGGACCGCATCCAAGACACGGAGGCG
TTCGTGGCGGCGAACGATGACGTCATACTGGTGGTGTTCCGCGGCTCGAG
CGAACTCACGGACTGGACGACGAACTTCAACCTGGTCCGCCGACTCGTCC
CGAGCGACTGGGGCCTGGACGGTCTCGGCTGCGACGTGCACCAGGGCTTC
GACGATGGGGTGGAGACAGTATGGAACCCGGGCTCCGCTCACCCCTCGGG
CATGCGTAACATCATCAAGACCCTCTGCAAAGAGGAAGGCAAGAACCGCA
AGCTGTACCTCGCCGGGCACTCTCTGGGAGGCGCCCTGGCCACCGTCGCG
GCGGCCCGCCTGGCGTTCATGGACGACGTGAAGATATCTGGGATGTACAC
CATCGGGAGCCCCAGAAGGGTGTTCGGTGAAAACATGGCCGACCGCTTCG
ACGCCAAGTTGAACGACGGCACGCGGATGAAGGACAAGTACTTCCGCTGC
AGGAACAACAACGATCTGGTCACGCGCGGCCCTCTTCGTCCTTACAAGCA
CGTCGGCACGGAGATCTACTTCGACCGATTCGGCGGCCTCTCGACGAGTA
CGCTCTTGGACCGCATTCTCGGCCGGTTCAGCGCGCTTTTGAGGTTCTCC
TTGGTCGACGGCTCCAACGACCACGGCGCCGGAGAGTACATCCGACTCTT
CAAGCAAACCGTCATCGATGAGAGGGTGTCGCTTCTGGACAAGGCCAAGA
GCTTGGCGGCGGACGCCGTGCAGAAGGTG
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