mRNA_Ecto-sp13_S_contig17900.5456.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp13_S_contig17900.5456.1
Unique NamemRNA_Ecto-sp13_S_contig17900.5456.1
TypemRNA
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Homology
BLAST of mRNA_Ecto-sp13_S_contig17900.5456.1 vs. uniprot
Match: A0A6H5JXT8_9PHAE (Nudix hydrolase domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JXT8_9PHAE)

HSP 1 Score: 437 bits (1124), Expect = 5.030e-149
Identity = 219/223 (98.21%), Postives = 223/223 (100.00%), Query Frame = 1
Query:    1 KVGAVSSQFASELNLFSSGDAVMFRASVPGAGPVGMEGPAYVLAPYAASVEERTRVVSGLVQGLVDTGAIPKGALRNELQDVRSATGKLSVTGDVLFRLERAAMIHFGVPSYGVHLNGYVEATDTEPMRVWIGVRSVSKATYPGMWDQMVAGGQPAGMGFKENMQKECEEEASLPSSLSCKIRPTGQVSYRYGTRKGLSTKFLCVFDLEVPEDFVPYNGDGEV 669
            KVGAVSSQFASELNLFSSGDAVMFRASVPGAGP+GMEGPAYVLAPYAASVEERTRVVSGLVQGLVDTGAIPKGALRNELQDVRSATGKLSVTGDVLFRLERAAMIHFGVPSYGVHLNGYV+ATDT+PMRVWIGVRSVSKATYPGMWDQMVAGGQPAGMGFKENMQKECEEEASLPSSLSCKI+PTGQVSYRYGTRKGLSTKFLCVFDLEVPEDFVPYNGDGEV
Sbjct:  342 KVGAVSSQFASELNLFSSGDAVMFRASVPGAGPMGMEGPAYVLAPYAASVEERTRVVSGLVQGLVDTGAIPKGALRNELQDVRSATGKLSVTGDVLFRLERAAMIHFGVPSYGVHLNGYVKATDTQPMRVWIGVRSVSKATYPGMWDQMVAGGQPAGMGFKENMQKECEEEASLPSSLSCKIKPTGQVSYRYGTRKGLSTKFLCVFDLEVPEDFVPYNGDGEV 564          
BLAST of mRNA_Ecto-sp13_S_contig17900.5456.1 vs. uniprot
Match: A0A7S3EQK9_9EUKA (Hypothetical protein n=1 Tax=Haptolina ericina TaxID=156174 RepID=A0A7S3EQK9_9EUKA)

HSP 1 Score: 195 bits (495), Expect = 2.430e-56
Identity = 103/189 (54.50%), Postives = 129/189 (68.25%), Query Frame = 1
Query:  127 LAPYAASVEERTRVVSGLVQGLVDTGAIPKGALRNELQDVRSAT----GKLSVTGDVLFRLERAAMIHFGVPSYGVHLNGYVE----ATDTEPMRVWIGVRSVSKATYPGMWDQMVAGGQPAGMGFKENMQKECEEEASLPSSLSCKIRPTGQVSYRYGTRKGLSTKFLCVFDLEVPEDFVPYNGDGEV 669
            LAP   S  ERTR+V+ LV+ +V    IP+  +RNELQDV   T    G  S+    + RLERAAMI+FG+PSYG+H+NG+V      TD  P  +WI  RS+ KATY G++DQMVAGGQP G+ F ENM+KECEEEASLP ++    + TG VSYRY TRKGLSTK L  +DLE+P+  +P   DGEV
Sbjct:  231 LAPGVLSAAERTRIVASLVEEMVVDDVIPRSKVRNELQDVHPLTRGFVGPESIPP--VLRLERAAMIYFGIPSYGMHINGWVRHPQAPTDPRPWALWIAKRSMGKATYAGLYDQMVAGGQPTGLSFSENMRKECEEEASLPPAVITTAQQTGLVSYRYATRKGLSTKVLATYDLEMPDGLLPICADGEV 417          
BLAST of mRNA_Ecto-sp13_S_contig17900.5456.1 vs. uniprot
Match: A0A8J6C9F3_DIALT (Nudix hydrolase domain-containing protein n=1 Tax=Diacronema lutheri TaxID=2081491 RepID=A0A8J6C9F3_DIALT)

HSP 1 Score: 196 bits (497), Expect = 8.300e-55
Identity = 112/209 (53.59%), Postives = 133/209 (63.64%), Query Frame = 1
Query:   49 SSGDAVMFRASVPGAGPVGMEGPAYVLAPYAASVEERTRVVSGLVQGLVDTGAIPKGALRNELQDVRSATGKLSV-TGDVLFRLERAAMIHFGVPSYGVHLNGYV-EATDTEPMRVWIGVRSVSKATYPGMWDQMVAGGQPAGMGFKENMQKECEEEASLPSSLSCKIRPTGQVSYRYGTRKGLSTKFLCVFDLEVPEDFVPYNGDGEV 669
            S+ DA    +S  GAG   + G A  LAP    ++ERT  V  LV  LV  GAI   ++R ELQDV    G+ +   G  + R+ER AM+HFGVPSYGVH+NGYV +A    P  VW+  RS+SKATYPG+ DQMVAGGQPA + F ENM+KEC EEASLP       R  G VSY Y TRKGLSTK L V+DL +P D  P N DGEV
Sbjct:  469 SAADAAGRGSSPGGAGGAPLGGVALRLAPGVVGLDERTAAVGALVAELVADGAIAPSSVRAELQDVWPVGGRQTAPAGQPVLRIERGAMVHFGVPSYGVHVNGYVLDAHSGRPAAVWLARRSMSKATYPGLLDQMVAGGQPAELSFDENMRKECAEEASLPPDAVGAARGAGVVSYCYSTRKGLSTKALAVYDLCMPADLEPVNADGEV 677          
BLAST of mRNA_Ecto-sp13_S_contig17900.5456.1 vs. uniprot
Match: A0A6U5DR77_9EUKA (Hypothetical protein n=1 Tax=Calcidiscus leptoporus TaxID=127549 RepID=A0A6U5DR77_9EUKA)

HSP 1 Score: 188 bits (477), Expect = 1.250e-54
Identity = 101/186 (54.30%), Postives = 123/186 (66.13%), Query Frame = 1
Query:  133 PYAASVEERTRVVSGLVQGLVDTGAIPKGALRNELQDVRS-ATGKLSVTGDV--LFRLERAAMIHFGVPSYGVHLNGYVEATDTE----PMRVWIGVRSVSKATYPGMWDQMVAGGQPAGMGFKENMQKECEEEASLPSSLSCKIRPTGQVSYRYGTRKGLSTKFLCVFDLEVPEDFVPYNGDGEV 669
            P     E R+ VV+ LVQ LVD G IP+  LRNE Q+V + + G +   GDV    R+ERAAMI+FGVPS+GVH+NG+V   D      P  +W+  RS+SKATYPG+ DQMVAGGQPA + F EN++KECEEEASLP  +   I P G VSYRY T KGLSTK L  +DLE+     P   DGEV
Sbjct:  139 PGVNGAEARSEVVASLVQELVDDGVIPRSKLRNEPQEVHAFSAGFVVAGGDVKPALRMERAAMIYFGVPSHGVHVNGWVRDPDEPASDVPFAMWVATRSMSKATYPGLLDQMVAGGQPAALSFDENVRKECEEEASLPPEVIAAIEPAGSVSYRYATPKGLSTKVLMTYDLEMEHGLQPLCSDGEV 324          
BLAST of mRNA_Ecto-sp13_S_contig17900.5456.1 vs. uniprot
Match: A0A7S2BMB1_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2BMB1_9STRA)

HSP 1 Score: 186 bits (473), Expect = 2.020e-54
Identity = 98/186 (52.69%), Postives = 124/186 (66.67%), Query Frame = 1
Query:  127 LAPYAASVEERTRVVSGLVQGLVDTGAIPKGALRNELQDVRSATGK---LSVTGDVLFRLERAAMIHFGVPSYGVHLNGYV-EATDTEPMRVWIGVRSVSKATYPGMWDQMVAGGQPAGMGFKENMQKECEEEASLPSSL-SCKIRPTGQVSYRYGTRKGLSTKFLCVFDLEVPEDFVPYNGDGEV 669
            LAP+      RTRVV+ LV GL+  GA+P   +RNELQDVR+ + K          L  +ERAAMI+FGVPS G H+NGYV +     P  +W+G R+++K TYPG+WDQ+ AGGQP G+ F +N+ KECEEEA+LP  L    IRP G VSYRY  R+GLS+K L V+DL +P    P NGDGEV
Sbjct:  105 LAPHEDDAAGRTRVVATLVDGLLADGAVPTDKVRNELQDVRAISSKGGGALAEAVPLLAMERAAMINFGVPSLGAHVNGYVTDPASGRPTAMWLGRRAMAKPTYPGLWDQIAAGGQPEGLSFYDNVAKECEEEATLPRDLLDMYIRPAGLVSYRYAARRGLSSKTLAVYDLPLPPGVKPSNGDGEV 290          
BLAST of mRNA_Ecto-sp13_S_contig17900.5456.1 vs. uniprot
Match: A0A836CMM1_9STRA (Adenylate kinase family protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CMM1_9STRA)

HSP 1 Score: 191 bits (484), Expect = 3.760e-54
Identity = 105/188 (55.85%), Postives = 126/188 (67.02%), Query Frame = 1
Query:  136 YAASVEERTRVVSGLVQGLVDTGAIPKGALRNELQDVRSATGKLSVTGDVLFRLERAAMIHFGV-----PSYGVHLNGY----VEATDT-EPMRVWIGVRSVSKATYPGMWDQMVAGGQPAGMGFKENMQKECEEEASLPSSLSCKIRPTGQVSYRYGTRKGLSTKFLCVFDLEVPEDFVPYNGDGEV 669
            Y    +ERTR + GLVQ LV  G I   ++R+ELQ               L R+ERAAMIHFGV     PS+GVH+NGY    V   D   P +VW+GVRS+SKATYPG+ DQ+ AGG  +G+  KEN+ +EC EEAS+P S S  I P GQVSYRY TRKGLSTK L VFDL++PEDFVP+NGDGEV
Sbjct:  316 YMGDSQERTRTLEGLVQSLVSAGVIDGTSVRDELQTP-------------LARMERAAMIHFGVTLLQVPSHGVHVNGYTAIKVNGGDWWRPHKVWLGVRSMSKATYPGLLDQLAAGGLSSGVSLKENVVRECMEEASVPLSFSKNILPAGQVSYRYSTRKGLSTKILTVFDLQLPEDFVPFNGDGEV 490          
BLAST of mRNA_Ecto-sp13_S_contig17900.5456.1 vs. uniprot
Match: A0A0M0JLU6_9EUKA (Ntp pyrophosphohydrolase including oxidative damage repair enzyme n=1 Tax=Chrysochromulina tobinii TaxID=1460289 RepID=A0A0M0JLU6_9EUKA)

HSP 1 Score: 192 bits (487), Expect = 1.050e-53
Identity = 108/204 (52.94%), Postives = 134/204 (65.69%), Query Frame = 1
Query:   76 ASVPGAGPVGMEGPAYVLAPYAASVEERTRVVSGLVQGLVDTGAIPKGALRNELQDVRSATGKLSVTGDV--LFRLERAAMIHFGVPSYGVHLNGYVE----ATDTEPMRVWIGVRSVSKATYPGMWDQMVAGGQPAGMGFKENMQKECEEEASLPSSLSCKIRPTGQVSYRYGTRKGLSTKFLCVFDLEVPEDFVPYNGDGEV 669
            +SV G+ P   EG A  LAP A S  ERT VV+ LV+ LV  G IP   +R+ELQ+V         +G      +LERAAMI+ GVP+Y VH+NG+V       D  P  +W+  RS+SKATY G+ DQMVAGGQPAGM F +N+ KEC EEASLP  +  ++ PTG VSYRY TRKGLSTK L +FDLE+P+  +P  GDGEV
Sbjct:  451 SSVSGSSP---EGIALELAPVATSSSERTEVVATLVEELVADGHIPAAKVRHELQEVHPIARGFVASGSAEPSLQLERAAMIYLGVPAYAVHVNGWVRHPERPQDPRPWGMWVAQRSLSKATYAGLLDQMVAGGQPAGMSFADNVAKECMEEASLPRDVLERLVPTGLVSYRYATRKGLSTKHLAIFDLEMPKGMLPMCGDGEV 651          
BLAST of mRNA_Ecto-sp13_S_contig17900.5456.1 vs. uniprot
Match: A0A4D9CV51_9STRA (Nudix hydrolase domain-containing protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9CV51_9STRA)

HSP 1 Score: 191 bits (485), Expect = 1.930e-53
Identity = 113/241 (46.89%), Postives = 141/241 (58.51%), Query Frame = 1
Query:    4 VGAVSSQFASELNLFSSGDAVMFRASVPGAGPVGMEGPAYV-LAPYAASVEERTRVVSGLVQGLVDTGAIPKGALRNELQDVRSATGKLSVTGDVLFRLERAAMIHFGVPSYGVHLNGYVE-------------ATDTEP-----MRVWIGVRSVSKATYPGMWDQMVAGGQPAGMGFKENMQKECEEEASLPSSLSCKIRPTGQVSYRYGTRKGLSTKFLCVFDLEVPEDFVPYNGDGEV 669
            VG    +FASEL L   G            G V +E   YV LAP A +  +RTR ++ L+Q L     I KG +RNEL DVR            LF++ER AMI FGVP++GVH+NGYV              +T   P     + +W+G+RS SKATYPG+ D + AGGQP+G+ F EN  KE EEEAS+P  L   +RP G +SYRY T+ GLSTK L VFDLE+P  F+PYNGDGEV
Sbjct:  362 VGYAHREFASELTLLQQG------------GGVEVELDRYVELAPLARTSSQRTRAIADLIQALTAAKVIHKGKIRNELMDVRPMLSP-HFQEPPLFQIERGAMIKFGVPTHGVHINGYVRLPAPSSPSSSPSSSTSAPPFPASSLHIWVGIRSPSKATYPGLRDVLAAGGQPSGLTFLENAVKEAEEEASIPRGLLQNLRPGGMISYRYQTKHGLSTKLLNVFDLELPPSFIPYNGDGEV 589          
BLAST of mRNA_Ecto-sp13_S_contig17900.5456.1 vs. uniprot
Match: A0A7S4DLT4_9EUKA (Hypothetical protein n=2 Tax=Lotharella globosa TaxID=91324 RepID=A0A7S4DLT4_9EUKA)

HSP 1 Score: 191 bits (485), Expect = 4.580e-53
Identity = 96/185 (51.89%), Postives = 128/185 (69.19%), Query Frame = 1
Query:  118 AYVLAPYAASVEERTRVVSGLVQGLVDTGAIPKGALRNELQDVRSATGKLSVTGDVLFRLERAAMIHFGVPSYGVHLNGYV-EATDTEPMRVWIGVRSVSKATYPGMWDQMVAGGQPAGMGFKENMQKECEEEASLPSSLSCKIRPTGQVSYRYGTRKGLSTKFLCVFDLEVPEDFVPYNGDGEV 669
            A  LAP  +++ ERT V+  L+  L+  G IP   +RNELQD+         TG+ L ++ERAAM +FG+PSY  H+NGYV +A    P  +W+G R++SK TYPG+ DQ+ AGGQPAGM F EN++KEC EEASL + +   +RP G VSYRY TR+GLSTK + V+DL++P+D  P NGDGEV
Sbjct:  501 AIFLAPEVSNLRERTGVMEALIDELIIDGTIPPEKVRNELQDIYPLDS--GWTGEPLLKIERAAMTYFGIPSYAAHVNGYVADAKTGRPSALWLGRRALSKPTYPGLLDQIAAGGQPAGMSFDENVRKECLEEASLSADVLEGLRPAGMVSYRYSTRRGLSTKTIAVYDLQLPDDVFPSNGDGEV 683          
BLAST of mRNA_Ecto-sp13_S_contig17900.5456.1 vs. uniprot
Match: A0A7S4B5L7_CHRCT (Hypothetical protein n=1 Tax=Chrysotila carterae TaxID=13221 RepID=A0A7S4B5L7_CHRCT)

HSP 1 Score: 190 bits (482), Expect = 1.260e-52
Identity = 103/185 (55.68%), Postives = 120/185 (64.86%), Query Frame = 1
Query:  127 LAPYAASVEERTRVVSGLVQGLVDTGAIPKGALRNELQDVRSATGKLSVTGDVLFRLERAAMIHFGVPSYGVHLNGYVE----ATDTEPMRVWIGVRSVSKATYPGMWDQMVAGGQPAGMGFKENMQKECEEEASLPSSLSCKIRPTGQVSYRYGTRKGLSTKFLCVFDLEVPEDFVPYNGDGEV 669
            LAP   S   RT  V+ LV GLV  G I    LR+ELQDVR+A          L R+ERAA+++FGVPSYGVH+NGYV       D  P  VW+GVR++ KATYPG++DQM AGGQP+GM    N QKE  EEASLP     ++RPTG VSYRY TRKGLSTK L  FDLE+P    P   DGEV
Sbjct:  509 LAPDEVSERGRTETVAALVAGLVADGVINSRTLRHELQDVRAADSDFG--SPPLLRIERAAVVYFGVPSYGVHVNGYVRDPKRPDDPTPHAVWVGVRAMCKATYPGLYDQMAAGGQPSGMSLLLNAQKEVGEEASLPPDAVARMRPTGAVSYRYATRKGLSTKRLATFDLELPSGLSPLCSDGEV 691          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig17900.5456.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JXT8_9PHAE5.030e-14998.21Nudix hydrolase domain-containing protein n=2 Tax=... [more]
A0A7S3EQK9_9EUKA2.430e-5654.50Hypothetical protein n=1 Tax=Haptolina ericina Tax... [more]
A0A8J6C9F3_DIALT8.300e-5553.59Nudix hydrolase domain-containing protein n=1 Tax=... [more]
A0A6U5DR77_9EUKA1.250e-5454.30Hypothetical protein n=1 Tax=Calcidiscus leptoporu... [more]
A0A7S2BMB1_9STRA2.020e-5452.69Hypothetical protein n=1 Tax=Dictyocha speculum Ta... [more]
A0A836CMM1_9STRA3.760e-5455.85Adenylate kinase family protein n=1 Tax=Tribonema ... [more]
A0A0M0JLU6_9EUKA1.050e-5352.94Ntp pyrophosphohydrolase including oxidative damag... [more]
A0A4D9CV51_9STRA1.930e-5346.89Nudix hydrolase domain-containing protein n=1 Tax=... [more]
A0A7S4DLT4_9EUKA4.580e-5351.89Hypothetical protein n=2 Tax=Lotharella globosa Ta... [more]
A0A7S4B5L7_CHRCT1.260e-5255.68Hypothetical protein n=1 Tax=Chrysotila carterae T... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig17900contigEcto-sp13_S_contig17900:385..3409 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop0
Start0
Seed ortholog score445.3
Seed ortholog evalue1.7e-122
Seed eggNOG ortholog2880.D8LDL6
Model size669
KEGG rclassRC00002,RC00017
KEGG koko:K00939,ko:K00949,ko:K06672,ko:K14787
KEGG ReactionR00127,R00619,R01547,R11319
KEGG Pathwayko00230,ko00730,ko01100,ko01110,ko01130,ko04111,map00230,map00730,map01100,map01110,map01130,map04111
KEGG ModuleM00049
Hectar predicted targeting categoryother localisation
GOsGO:0003674,GO:0003824,GO:0004788,GO:0006139,GO:0006725,GO:0006732,GO:0006766,GO:0006767,GO:0006772,GO:0006790,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0008655,GO:0009058,GO:0009108,GO:0009110,GO:0009228,GO:0009229,GO:0009987,GO:0016462,GO:0016740,GO:0016772,GO:0016778,GO:0016787,GO:0016817,GO:0016818,GO:0017110,GO:0017144,GO:0018130,GO:0019438,GO:0019637,GO:0034641,GO:0034654,GO:0036172,GO:0042357,GO:0042364,GO:0042723,GO:0042724,GO:0043094,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044272,GO:0044281,GO:0044283,GO:0044715,GO:0046483,GO:0051186,GO:0051188,GO:0071704,GO:0072527,GO:0072528,GO:0090407,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576
Exons5
EggNOG free text desc.8-oxo-dGDP phosphatase activity
EggNOG OGsCOG0494@1,COG0563@1,KOG3078@2759,KOG4313@2759
EC2.7.4.3,2.7.6.2
Cds size669
COG Functional cat.L
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko01000,ko03009,ko03036,ko04147
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681462926.9942033-CDS-Ecto-sp13_S_contig17900:384..4921681462926.9942033-CDS-Ecto-sp13_S_contig17900:384..492Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig17900 385..492 -
1681462927.0074742-CDS-Ecto-sp13_S_contig17900:1323..14081681462927.0074742-CDS-Ecto-sp13_S_contig17900:1323..1408Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig17900 1324..1408 -
1681462927.0187345-CDS-Ecto-sp13_S_contig17900:1733..18391681462927.0187345-CDS-Ecto-sp13_S_contig17900:1733..1839Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig17900 1734..1839 -
1681462927.027451-CDS-Ecto-sp13_S_contig17900:2584..27141681462927.027451-CDS-Ecto-sp13_S_contig17900:2584..2714Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig17900 2585..2714 -
1681462927.0364368-CDS-Ecto-sp13_S_contig17900:3169..34091681462927.0364368-CDS-Ecto-sp13_S_contig17900:3169..3409Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig17900 3170..3409 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig17900.5456.1prot_Ecto-sp13_S_contig17900.5456.1Ectocarpus species13 EcNAP12_S_4_19mpolypeptideEcto-sp13_S_contig17900 385..3409 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp13_S_contig17900.5456.1

>prot_Ecto-sp13_S_contig17900.5456.1 ID=prot_Ecto-sp13_S_contig17900.5456.1|Name=mRNA_Ecto-sp13_S_contig17900.5456.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=223bp
KVGAVSSQFASELNLFSSGDAVMFRASVPGAGPVGMEGPAYVLAPYAASV
EERTRVVSGLVQGLVDTGAIPKGALRNELQDVRSATGKLSVTGDVLFRLE
RAAMIHFGVPSYGVHLNGYVEATDTEPMRVWIGVRSVSKATYPGMWDQMV
AGGQPAGMGFKENMQKECEEEASLPSSLSCKIRPTGQVSYRYGTRKGLST
KFLCVFDLEVPEDFVPYNGDGEV
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mRNA from alignment at Ecto-sp13_S_contig17900:385..3409-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp13_S_contig17900.5456.1 ID=mRNA_Ecto-sp13_S_contig17900.5456.1|Name=mRNA_Ecto-sp13_S_contig17900.5456.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=3025bp|location=Sequence derived from alignment at Ecto-sp13_S_contig17900:385..3409- (Ectocarpus species13 EcNAP12_S_4_19m)
AAGGTGGGAGCGGTCTCCAGCCAGTTCGCCAGCGAGCTTAACCTCTTCTC CAGCGGCGACGCCGTCATGTTCAGGGCGAGCGTCCCGGGGGCCGGGCCCG TGGGCATGGAGGGTCCCGCCTACGTGCTTGCGCCTTACGCCGCTAGCGTG GAGGAGAGGACTCGCGTCGTGAGCGGTCTTGTGCAGGGTTTGGTTGACAC CGGCGCCATTCCGAAGGGGGCCCTGAGAAACGAACTCCAGGTAGGTGTCT GTTTGTCGATACAGTAGTATAACAGCTTTCTGAGTGGGGTGGATGTTGCA CTTGCGGTGCCTTTAACCTCGCAATACGAAAACAAGGGCAATGTTCTTGC GTTTGTGATACCCTCTGCATGATGAACATCGGCTTCAAAACACGCACGGA AATGTGTAGACTGGCGCCACAACAGAAAGAAAGAGCGAGATACCCACATC GTAACACCCATATAGGATATGATAAAGTAGTTTCTGACGTAGCGTTGGGC GCGTGACTTCGAAACAAGCCTCGACCCTATCCCATTCCCTTTCCTGTGTT TTTGAACGTATCGTCGTCGCCCCCCTGCCACTCCGCCAATTCCACGATTC TGCTGTGCCCCTGATTCGCGGGTGGTCCCCTGTGTGCGTGCGACCACATG CACTTGCATATCGTATGCATACTGTTATGCACATTTTATGCATAGGACGT GCGGTCGGCGACCGGAAAGCTGAGCGTGACAGGAGACGTGCTGTTTCGGC TAGAAAGAGCGGCGATGATCCACTTCGGTGTGCCGTCGTACGGCGTACAC CTCAACGGCTACGTCGAAGCCACCGGTGAGCGATGCGGGATTGAAGTCGA AAACCCGCAAAAAAAGTTTTGGAAAACCGGTCAAAAGCCAATGGAACAAC CCGCGCTTTCGTGTGGTCCTGTCGCGTACTATTATTAGTACAATTTATTT AGCACCGGTCGTGCTACATTGTCAAAGAAAAGCCCCGACCGTAAGAGTAC CGTGATATCAAAGCTACTTGGAGCTGTGCCACACCTATCACGTCAACTGG TTCGAGCGAGTGGTAAATAACTAACGTCGCTACATGGGACTCAAAGTGTT GTTGTCTGGCAAGAGTTGGCCCGAAGATGGCTCGCGGGAAGACAAGCAGT CGGGGTGCAAATAGTTGTAGAGTGAGATCGATGCAGCTTCAACTCTGCGA CCTGCAAATGTTCCAACCTTTCAGTGCCTTTTTTGGCCTTCTTCATCAGT GATTTGACCACCCCATGATGTGGCTTTTCTCTACGTGTGCGAGTTCACAC GATCGAGACAGAATTGACGGAAGCTTCCCGGGAAGACAAGCCCGTCAACG AATGAAGCTTGCTCCGGACGACTCTGCTCCCGCGACAAAAGAACCGGGAG CAGCAGTAGCGTAGAGGCGTGATTGGTCACTTGGTTGCAGTGACTCCCTC CCCGTCTTGCTTCTTCCATCAATCGTGTCATGCATATTTCTTGGAACCTT TTTTTTTTCCAATTTTTTGTACCGACATGGCCCCTTTGCTCTCGCCCTGC TCCCCATAACGCCACTCTAGATACCGAGCCAATGAGGGTGTGGATTGGCG TGAGGAGCGTCAGCAAAGCAACCTACCCAGGCATGTGGGACCAGATGGTC GCCGGGGGGCAGCCGGCTGGGATGGGGTGAGTCCCCTTTATTGGTGTTCA TGTAGCCGCCGATTAGCCCTACATTTCGGGCAGCAAGAATGGGGTGCGTG CGTCTCTTATTTGTAAGTCTTATTCTTGTTGACGTTGAAATATTGGCAAG ATGTCGGGATCGGGCTCTTTCGACCACGTAATGCCCACGTACTAGCACGC ACCTCCCAAGGGGAACATACTGCGGCGGCGTACCGGCAGCGGTTTCGCTG CGTTTTTTTTTGCGATTTTTTGTCTTTGATGTTCTGTGTCTTTGTCTTGA GCATTGTTTACCGTTACTGAGAGTTTTATTTTTGTTATTATCTGTGTACA GGTTCAAGGAGAACATGCAGAAGGAGTGCGAGGAAGAGGCGAGTCTCCCT TCCAGCCTGTCCTGCAAGATACGGCCTACCGGTCAGGTACGTAAACTTCG ACTATTCAAAAGGTTTCGCGTCGTGCGAAGTAGGGAGATGATAAGAACCA GTTCTCCGTCTACCCTCGGACAAGCAATGCAAAAACGCTTGGTGTTGGTT GTTCATTATTAAGAAGATACACAGAAAAGGTACAGGTAATTTCACTTGTA CATACTAGTATCCTCGGACAAAGGCAGGTTGCGGTTCATGTTTATCGCGA AAAAAAAGAACGAGGTTCATTAGACGTTGAAATCTGCCGGGTAGCGAACG AGCGAATCACACGTGTATCTCTCTCATCTGCATATGTATCTCTCCTGTAT CAAGAACACCGGCCTGGGAAGGGCAGGAAACGTGGACGGTGTAGAGTAGT TGGGTTGGCAAAACAATCGCGACCGGAAAGCTCGCGTGTGTCAACTCAAA GAACGCGTTCGCTAGCAGTGCAAGTAGAGTCTACCGCGGATTGAACTCTC TTGTGGTTATGGTGGTGGTTGTGGTGGTGCAAGAGTTCAATGACGAACAG CATTGTTCAAAGCGTACCGACGTTCAAAATGAAACTACCGGCAACTACCC AAACACATAAAACATCAGTACGCGTCATGGAAGCTGTTAGACTGTTTGGA TGAAGTGCAGCAGCGTGGCCTTTGCTTACGTCCTTCCACACGGTATACTA CACGCTTGTTTCCCTTTTTGCTTCATTACCTCTTCCTCTTTAGCTGTCGT TTCTTGTCGTTTTTCTCTCGTCAGATTGTCTCTTGTGTGTCCACCTTGGA TATTTCCTTGTCTCAGGCCCTCTTTTCGTTTCTTTTTCTCCGTTTGTTGT ATGGATTGTTTCGAAAGGTTTCGTACCGTTACGGCACGAGGAAAGGGTTG AGCACCAAGTTCTTGTGCGTCTTCGACCTCGAGGTTCCGGAGGACTTCGT ACCGTACAACGGGGATGGCGAGGTA
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Coding sequence (CDS) from alignment at Ecto-sp13_S_contig17900:385..3409-

>mRNA_Ecto-sp13_S_contig17900.5456.1 ID=mRNA_Ecto-sp13_S_contig17900.5456.1|Name=mRNA_Ecto-sp13_S_contig17900.5456.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=669bp|location=Sequence derived from alignment at Ecto-sp13_S_contig17900:385..3409- (Ectocarpus species13 EcNAP12_S_4_19m)
AAGGTGGGAGCGGTCTCCAGCCAGTTCGCCAGCGAGCTTAACCTCTTCTC
CAGCGGCGACGCCGTCATGTTCAGGGCGAGCGTCCCGGGGGCCGGGCCCG
TGGGCATGGAGGGTCCCGCCTACGTGCTTGCGCCTTACGCCGCTAGCGTG
GAGGAGAGGACTCGCGTCGTGAGCGGTCTTGTGCAGGGTTTGGTTGACAC
CGGCGCCATTCCGAAGGGGGCCCTGAGAAACGAACTCCAGGACGTGCGGT
CGGCGACCGGAAAGCTGAGCGTGACAGGAGACGTGCTGTTTCGGCTAGAA
AGAGCGGCGATGATCCACTTCGGTGTGCCGTCGTACGGCGTACACCTCAA
CGGCTACGTCGAAGCCACCGATACCGAGCCAATGAGGGTGTGGATTGGCG
TGAGGAGCGTCAGCAAAGCAACCTACCCAGGCATGTGGGACCAGATGGTC
GCCGGGGGGCAGCCGGCTGGGATGGGGTTCAAGGAGAACATGCAGAAGGA
GTGCGAGGAAGAGGCGAGTCTCCCTTCCAGCCTGTCCTGCAAGATACGGC
CTACCGGTCAGGTTTCGTACCGTTACGGCACGAGGAAAGGGTTGAGCACC
AAGTTCTTGTGCGTCTTCGACCTCGAGGTTCCGGAGGACTTCGTACCGTA
CAACGGGGATGGCGAGGTA
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