mRNA_Ecto-sp13_S_contig179.5453.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig179.5453.1 vs. uniprot
Match: A0A6H5KG92_9PHAE (Rieske domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KG92_9PHAE) HSP 1 Score: 1081 bits (2795), Expect = 0.000e+0 Identity = 536/574 (93.38%), Postives = 547/574 (95.30%), Query Frame = 2
Query: 230 MRHPVPGRAVVLLFGAISLAEGFSLVRLPPTACSSSXXXXXXSIASSTSNLSAVKTSWETAPAVSSRESKANEESFNWHKQWYPVLSEKDSDPGKAHAVQLLGKDLVVWRNTEGRWSAFDDRCPHRAAPLSEGRVEKDSSLLCAYHAWRFDADGKCLSIPQSDRGGKDETNPRACAKLYPTQQAAQDMVWVWGENGPDAVLESLLTKPALVSALEDKEGIKSGRVVPGVVTQRDLAYSWETFWENVMDPAHVVVSHHGLMGKRSMAKPLDLEATPQPAMTKEGFVVDNNSPQFGAKQGVATFVPPALVEIATELDDGKTISLVQYNIPTRPGWSRMFNRQLTITPEVVGEIKGDDEKDKKKRTPSLLQLVARISPVKLKLAPNEQRAWIQHMFSHMFVHQDMPLLYHQEKIMASSGHTGAKWSDGIYTPTTSDKGIHTLRKWIKKFGSGGPPWPKGYDTSLPSRHDNPDVMWDIYEQHTKHCTTCLGALKRVEQCITAAKVSTVASLTWAVLRAASAISTSILASPGTPPSNFVAAKAMLPGVMLMLASLKAAKMLGSLRQMFYVYKYIHQEHD 1951
MRHP P R VVLL GAISLAEGFSLVRLPPTAC + SSTSNLSAVKTS ETAPAVSSRESKANEESF+WHKQWYPVLSEKDSDPGKAHAVQLLGKDLVVWRNTEGRWSAFDDRCPHRAAPLSEGRVEKD SLLCAYHAWRFD DGKCLSIPQSDRGGKDETNPRACAKLYPTQ AQDMVWVWG+NGPDAVL+S+LTKPALVSALEDK+GIKSGRVVPGVVTQRDLAYSWETFWENVMDPAHVVVSHHGLMGKRSMAKPLDLEATPQPAMTKEGFVVDNNSPQFGAKQGVATFVPPALVEIATEL+DGKTISLVQYNIPTRPGWSRMFNRQLTITPEVVGE KGDD KDKK R PSLLQLVARISPVKLKLAPNEQRAWIQH+FSHMFVHQDMPLLYHQEKIMASSGHTGAKWSDGIYTPTTSDKGIHTLRKWIKKFGSGGPPWPKGYDTSLPSRHDNPDVMWDIYEQHTKHCT CLGALKRVEQCITAAKVSTVASLTWAVLRAASAISTSILASPGTPPSNFVAAKAMLPGV+LMLASLK KMLGSLR+MFYVYKY+HQEHD
Sbjct: 1 MRHPAPRRTVVLLIGAISLAEGFSLVRLPPTACGKTST-------SSTSNLSAVKTSSETAPAVSSRESKANEESFDWHKQWYPVLSEKDSDPGKAHAVQLLGKDLVVWRNTEGRWSAFDDRCPHRAAPLSEGRVEKDGSLLCAYHAWRFDTDGKCLSIPQSDRGGKDETNPRACAKLYPTQ-VAQDMVWVWGKNGPDAVLDSVLTKPALVSALEDKKGIKSGRVVPGVVTQRDLAYSWETFWENVMDPAHVVVSHHGLMGKRSMAKPLDLEATPQPAMTKEGFVVDNNSPQFGAKQGVATFVPPALVEIATELEDGKTISLVQYNIPTRPGWSRMFNRQLTITPEVVGENKGDDNKDKK-RAPSLLQLVARISPVKLKLAPNEQRAWIQHIFSHMFVHQDMPLLYHQEKIMASSGHTGAKWSDGIYTPTTSDKGIHTLRKWIKKFGSGGPPWPKGYDTSLPSRHDNPDVMWDIYEQHTKHCTACLGALKRVEQCITAAKVSTVASLTWAVLRAASAISTSILASPGTPPSNFVAAKAMLPGVLLMLASLKTTKMLGSLRRMFYVYKYVHQEHD 565
BLAST of mRNA_Ecto-sp13_S_contig179.5453.1 vs. uniprot
Match: A0A6H5JY02_9PHAE (Rieske domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JY02_9PHAE) HSP 1 Score: 517 bits (1331), Expect = 8.080e-167 Identity = 278/569 (48.86%), Postives = 358/569 (62.92%), Query Frame = 2
Query: 248 GRAVVLLFGAISLAEGFSLVRLPPTACSSSXXXXXXSIASSTSNLSAVKTSWETAPAVSSRESKANEESFNWHKQWYPVLSEKDSDPGKAHAVQLLGKDLVVWRNTEGRWSAFDDRCPHRAAPLSEGRVEKDSSLLCAYHAWRFDADGKCLSIPQSDRGGKDETNPRACAKLYPTQQAAQDMVWVWGENGPDAVLESLLTKPALVSALEDKEGIKSGRVVPGVVTQRDLAYSWETFWENVMDPAHVVVSHHGLMGKRSMA-KPLDLEATPQ-PAMTKEGFVVDNNSPQFGAKQGVATFVPPALVEIATELDDGKTISLVQYNIPTRPGWSRMFNRQLTITPEVVGEIKGDDEKDKKKRTPSLLQLVARISPVKLKLAPNEQRAWIQHMFSHMFVHQDMPLLYHQEKIMASSGHTGAKWSDGIYTPTTSDKGIHTLRKWIKKFGSGGPPWPKGYDTSLPSRHDNPDVMWDIYEQHTKHCTTCLGALKRVEQCITAAKVSTVASLTWAVLRAASAISTSILA-SPGTPPSNFVAAKAMLPGVMLMLASLKAAKMLGSLRQMFYVYKYIHQE 1945
GR LL +S+A GF L +S + S+ LSAV + +++P V + E+ F+W+KQWYPVLS KD+DPG+AH VQLLGK+LVVWRN EGRWS FDDRCPHRAAPL+EGR+E D SLLCAYHAWRFDADGKCLSIPQSDRGGKDE P+ACAK+ AQ MVWVWGENGPDA LES LT L+ L+DKEGI+SGRV+ V Q DLAY W+TF ENV+DP+HV VSHHG+ G R P+DL+ + + P TK+GF + + V TF PP LV I D + L+ Y IPTRPGW R+ R + K ++ + KR + + V KL +W+QH+ +F+HQD+ L+HQEKI+AS+G+ + + ++ P +D+ + LR+WI K GSGGP W K D +LP R N + ++++YE HTK CT+C GALK V++ +T AK + V S TWAVLR A A+ T+ A SP N V A+AMLP V L AS+ A K+L LR MFY Y + HQ+
Sbjct: 35 GRCARLLAAGLSVASGFHLP--------ASSGAPRRVVPSAARGLSAVDS--DSSPGVVAASPAGKEDLFDWNKQWYPVLSLKDTDPGRAHPVQLLGKELVVWRNKEGRWSCFDDRCPHRAAPLTEGRIEDDGSLLCAYHAWRFDADGKCLSIPQSDRGGKDEAQPKACAKV------AQGMVWVWGENGPDAGLESALTPAQLIPDLDDKEGIESGRVMLARVGQNDLAYGWDTFMENVVDPSHVTVSHHGVAGDRYTGPSPIDLKPSARWPVPTKDGFEFEFRDDSVSSDSTV-TFQPPCLV-INEAKDSAGKLLLILYGIPTRPGWVRLLGRSAYVHTFAPNSKKAKEQAKEDKRNGVKKSRLQATANVVTKLP-----SWLQHVTGSLFLHQDLVFLHHQEKILASAGYDSSNYGQAVFVPAAADRAVLALRQWITKHGSGGPAWDKNCDRTLPPRERNREDLFNVYENHTKSCTSCQGALKNVKKMLTTAKTAAVISFTWAVLRGARAVGTAAAAGSPSARVINTVTARAMLPAVALTFASVGAIKILEKLRGMFYTYSFHHQD 580
BLAST of mRNA_Ecto-sp13_S_contig179.5453.1 vs. uniprot
Match: A0A6H5KEF5_9PHAE (Rieske domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KEF5_9PHAE) HSP 1 Score: 496 bits (1276), Expect = 5.830e-159 Identity = 263/511 (51.47%), Postives = 336/511 (65.75%), Query Frame = 2
Query: 449 ESFNWHKQWYPVLSEKDSDPGKAHAVQLLGKDLVVWRNTEGRWSAFDDRCPHRAAPLSEGRVEKDSSLLCAYHAWRFDADGKCLSIPQSDRGGKDETNPRACAKLYPTQQAAQDMVWVWGENGPDAVLESLLTKPALVSALEDKEGIKSGRVVPGVVTQRDLAYSWETFWENVMDPAHVVVSHHGLMGKRSM-AKPLDLEATPQ-PAMTKEGFVVDNNSPQFGAKQGVATFVPPALVEIATELDDGKTISLVQYNIPTRPGWSRMFNRQLTI---TPEVVGEIKGDDEKDKK--KRTPSLLQLVARISPVKLKLAPNEQRAWIQHMFSHMFVHQDMPLLYHQEKIMASSGHTGAKWSD---GIYTPTTSDKGIHTLRKWIKKFGSGGPPWPKGYDTSLPSRHDNPDVMWDIYEQHTKHCTTCLGALKRVEQCITAAKVSTVASLTWAVLRAASAIST-SILASPGTPPSNFVAAKAMLPGVMLMLASLKAAKMLGSLRQMFYVYKYIHQEH 1948
E F+W+KQWYP+L+ DPG+AH VQLLGK+LVVWRN EGRWS FDDRCPHRAAPL+EGR+E D SLLCAYHAWRFDADGKCLSIPQSDRGGKDE NP+ACAK+YPTQ AQ ++WVW ENGPDA LES LT P L+ L+D+EG+ SGRVVP V DLAY W+T EN +DPAHV +HHG+ G R +P+DLE + P GF + G + TFVPP LV + D+ T+ L+ Y IPT+PGWSR+ RQ + P+ E K +K+K+ K+T LL + ARI+ ++ W+ H S +F++QDM L+HQEK +AS G+ G + S +YTP +D+ + +RKWI GSGGP W K D +LP R N +V++D YE HTK C+TCL ALK V + + A+K +TV TW +LR A A+ST + + S N V A+AMLP V LMLASL A K L R ++Y Y + HQ++
Sbjct: 66 EVFDWNKQWYPLLAADHVDPGRAHPVQLLGKNLVVWRNKEGRWSCFDDRCPHRAAPLTEGRIEDDGSLLCAYHAWRFDADGKCLSIPQSDRGGKDEANPKACAKVYPTQ-VAQGIIWVWAENGPDAGLESALTPPHLIPELDDEEGLASGRVVPQGVQHTDLAYGWDTMIENFVDPAHVPSAHHGVAGDRYKDVRPIDLEPDEEWPVTATSGFRFKFDDEVAGTHNKI-TFVPPCLV-LVENADNSGTLKLMLYGIPTKPGWSRLVGRQAYVHKYAPKSK-EAKALHKKNKRLGKKTSGLL-VAARIT--------SKFPQWLIHATSGLFLYQDMVFLHHQEKTLASVGYDGTRSSSYGRAVYTPAPADRAVMAVRKWIATHGSGGPAWDKDCDPTLPEREQNREVLFDYYEGHTKTCSTCLRALKNVNRLLAASKTATVVFFTWGLLRGARAVSTPAAVGSRSAGVINAVTARAMLPAVALMLASLGAVKALEKFRSLYYTYSFHHQDN 563
BLAST of mRNA_Ecto-sp13_S_contig179.5453.1 vs. uniprot
Match: D8LGA1_ECTSI (Rieske (2Fe-2S) region n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LGA1_ECTSI) HSP 1 Score: 461 bits (1186), Expect = 5.410e-147 Identity = 245/501 (48.90%), Postives = 315/501 (62.87%), Query Frame = 2
Query: 470 QWYPVLSEKDSDPGKAHAVQLLGKDLVVWRNTEGRWSAFDDRCPHRAAPLSEGRVEKDSSLLCAYHAWRFDADGKCLSIPQSDRGGKDETNPRACAKLYPTQQAAQDMVWVWGENGPDAVLESLLTKPALVSALEDKEGIKSGRVVPGVVTQRDLAYSWETFWENVMDPAHVVVSHHGLMGKRSM-AKPLDLEATPQPAMTKEGFVVDNNSPQFGAKQGVATFVPPALVEIATELDDGKTISLVQYNIPTRPGWSRMFNRQLTITPEVVGEIKGDDEKDKKKRT---PSLLQLVARISPVKLKLAPNEQRAWIQHMFSHMFVHQDMPLLYHQEKIMASSGHTG---AKWSDGIYTPTTSDKGIHTLRKWIKKFGSGGPPWPKGYDTSLPSRHDNPDVMWDIYEQHTKHCTTCLGALKRVEQCITAAKVSTVASLTWAVLRAASAIST-SILASPGTPPSNFVAAKAMLPGVMLMLASLKAAKMLGSLRQMFYVYKYIHQEH 1948
QWYPVL K DPG+AH VQLLGK+LVVWRN EGRWS FDDRCPHRAAPL+EGR+E D SLLCAYHAWRFDADGKCLSIPQSDRGGKDE P+ACAK+YPTQ AQD++WVW ENGPDA LES LT P L+ L+D+EG+ SGRVVP V DLAY W+T EN++DP+HV +HHG+ G R +P+DLE + +T AT LVE A DD + + Y +PT+PGW R+ RQ + + + + KR PS L + A I + P W+ H + +F++QDM LL+HQ+K +AS GH G + + +YTP +D+ + +RKWI GSGGP W K D +LP R +V++D YE HTK C+TCL ALK + + + A+K +T S TW +LR A A+ST + + S N V A+A+LP V L LASL A K+L LR ++Y Y + HQ++
Sbjct: 10 QWYPVLGVKHVDPGRAHPVQLLGKNLVVWRNKEGRWSCFDDRCPHRAAPLTEGRIEDDGSLLCAYHAWRFDADGKCLSIPQSDRGGKDEAQPKACAKVYPTQ-VAQDIIWVWAENGPDAGLESALTPPHLLPELDDEEGLASGRVVPQGVQHTDLAYGWDTMIENLVDPSHVPCAHHGVAGDRYKDVRPIDLEPDKEWPVT-------------------AT----VLVENA---DDAGELKMTLYGVPTKPGWCRLVGRQAYVHKYAPKSKEAKALRKENKRLGKKPSELMVAASI----MSKIPQ----WLMHASAGIFLYQDMVLLHHQDKTLASVGHDGNSTSSYGKAVYTPAPADRAVMAVRKWIATHGSGGPAWDKDCDPTLPEREHKREVLFDYYEGHTKTCSTCLRALKNINKLLAASKTATAVSCTWGLLRGARAVSTPTAVGSRSASVVNAVTARAILPAVALTLASLGAVKVLEKLRGLYYTYSFHHQDN 475
BLAST of mRNA_Ecto-sp13_S_contig179.5453.1 vs. uniprot
Match: A0A1Z4IU02_9CYAN (Cell death suppressor protein n=5 Tax=Nostocales TaxID=1161 RepID=A0A1Z4IU02_9CYAN) HSP 1 Score: 353 bits (906), Expect = 4.090e-106 Identity = 197/506 (38.93%), Postives = 274/506 (54.15%), Query Frame = 2
Query: 455 FNWHKQWYPVLSEKDSDPGKAHAVQLLGKDLVVWRNTEGRWSAFDDRCPHRAAPLSEGRVEKDSSLLCAYHAWRFDADGKCLSIPQS---DRGGKDETNPRACAKLYPTQQAAQDMVWVWGENGPDAVLESLLTKPALVSALEDKEGIKSGRVVPGVVTQRDLAYSWETFWENVMDPAHVVVSHHGLMGKRSM-AKPLDLEATPQPAMTKEGFVVDNNSPQFGAKQGVATFVPPALVEIATELDDGKTISLVQYNIPTRPGWSRMFNRQLTITPEVVGEIKGDDEKDKKKRTPSLLQLVARISPVKLKLAPNEQRAWIQHMFSHMFVHQDMPLLYHQEKIMASSGHTGAKWSDGIYTPTTSDKGIHTLRKWIKKFGSGGPPWPKGYDTSLPSRHDNPDVMWDIYEQHTKHCTTCLGALKRVEQCITAAKVSTVASLTWAVLRAASAISTSILASPG---TPPSNFVAAKAMLPGVMLMLASLKAAKMLGSLRQMFYVYKYIHQEHD 1951
F W K WYPV + + DP + HA+QLLGKD+V+WR+ G+W F+D CPHR PLSEGRVE D +LLCAYHAWRFDA G C+S+PQS + K + ++CA +YPTQ+ Q ++WVW +G A +ES L P +V+ LED SGRVV RDL Y WE F ENV DPAHV VSHHG+ G R AK D+ Q T+EGF ++ Q Q + F PP + IAT DG + L Y PTRPGW R Q+ + K+ + + P L P W+ H+ + +F+HQDM L++QEKI+A KW D ++TP DK + T R+W++K G GG PW +GY +PS + ++D++ HT+HCT C ALK + + A V+ V L AV+ A I+ + + PP+ F A G++ + + L ++FY+Y++ H +D
Sbjct: 27 FQWTKHWYPVAAVEYLDPKRPHAMQLLGKDIVLWRDGCGKWRCFEDFCPHRLVPLSEGRVESDGTLLCAYHAWRFDAQGNCVSMPQSKDEETAAKHCESQKSCAVVYPTQER-QGLLWVWASSGEQAKVESQLVTPRIVAELEDH----SGRVVKSFWNFRDLPYGWEYFMENVSDPAHVPVSHHGITGDRYKDAKYYDMIPVRQ-ISTQEGFALEIQPTQGNIVQAIHDFQPPCYMRIATTSKDGGQLILALYATPTRPGWCRHIGCQVFV-------------KNPEGKMPQGLSFFGLPLPT-----------WLGHVLASLFLHQDMVFLHYQEKIIAH--RRKGKWLDAVFTPNPQDKMVITFRQWLEKRGGGGIPWVEGYSHDVPSAEKDKQKLFDVWTTHTQHCTVCQNALKNINRLTVLAYVAAVVCLFVAVILDARTIAMQVASGTSIFTVPPTGFWLTLA--GGILFAVVGYQ----LKKFSRLFYIYEFEHARND 494
BLAST of mRNA_Ecto-sp13_S_contig179.5453.1 vs. uniprot
Match: Q3MEA6_TRIV2 (Rieske (2Fe-2S) region n=6 Tax=Nostocaceae TaxID=1162 RepID=Q3MEA6_TRIV2) HSP 1 Score: 352 bits (902), Expect = 1.780e-105 Identity = 201/518 (38.80%), Postives = 283/518 (54.63%), Query Frame = 2
Query: 419 VSSRESKANEESFNWHKQWYPVLSEKDSDPGKAHAVQLLGKDLVVWRNTEGRWSAFDDRCPHRAAPLSEGRVEKDSSLLCAYHAWRFDADGKCLSIPQSD---RGGKDETNPRACAKLYPTQQAAQDMVWVWGENGPDAVLESLLTKPALVSALEDKEGIKSGRVVPGVVTQRDLAYSWETFWENVMDPAHVVVSHHGLMGKRSM-AKPLDLEATPQPAMTKEGFVVDNNSPQFGAKQGVATFVPPALVEIATELDDGKTISLVQYNIPTRPGWSRMFNRQLTITPEVVGEIKGDDEKDKKKRTPSLLQLVARISPVKLKLAPNEQRAWIQHMFSHMFVHQDMPLLYHQEKIMASSGHTGAKWSDGIYTPTTSDKGIHTLRKWIKKFGSGGPPWPKGYDTSLPSRHDNPDVMWDIYEQHTKHCTTCLGALKRVEQCITAAKVSTVASLTWAVLRAAS--AISTSILASPGT-PPSNFVAAKAMLPGVMLMLASLKAAKMLGSLRQMFYVYKYIHQEHD 1951
++ +S E +F W KQWYP+ + DP + HA+QLLGKD+V+WR+ +W F+D CPHR APLSEGRVE D +LLCAYHAWRFDA G C+SIPQS K+ + ++CA +YPTQ+ Q ++WVW E G A +ES L P +V LED SG+V+ RDL Y W+ F ENV DPAHV VSHHG++G R AK D+ +P T++GF + Q QG+ F PP + I + +DG + L Y PTRPGW R Q+ + K+ + + P L PV W+ H+ + +F+HQDM L++QEKI+A + KW + +YTP DK + TLR+W+K GG PW +GY + +P + ++D++ HT+HCT C ALK + + A +S L AV+ A A+ ++ AS T PP F A L G +L+ L ++FYVY++ H +D
Sbjct: 20 ATNEQSSKEENTFQWTKQWYPLAVVEFLDPSRPHAMQLLGKDIVLWRDGSSQWRCFEDFCPHRLAPLSEGRVEADGTLLCAYHAWRFDAQGNCVSIPQSKDEKTAAKNCESQKSCAVVYPTQER-QGLLWVWAEAGEQAKVESQLQTPRIVPELEDN----SGKVIKSPWNFRDLPYGWDYFMENVSDPAHVPVSHHGIIGDRYKDAKFYDMIPV-RPISTQDGFAFEIQPTQGKTVQGIHDFQPPCHMRIVSTSEDGGQLILALYATPTRPGWCRHIGCQVFV-------------KNPQGKKPQGLSFFGLPLPV-----------WLVHVLASLFLHQDMVFLHYQEKIIAQKKN--GKWLNAVYTPNPQDKMVITLRQWLKNRAGGGIPWAEGYSSDIPPAEKDKQKLFDVWTTHTQHCTVCQDALKNINRLTVLAYISAAICLFLAVILDARTVAMQAALGASIFTLPPVGFWLA---LGGAILLAV---VGYQLKRFSRLFYVYEFEHARND 499
BLAST of mRNA_Ecto-sp13_S_contig179.5453.1 vs. uniprot
Match: K9QN36_NOSS7 (Rieske (2Fe-2S) domain-containing protein n=1 Tax=Nostoc sp. (strain ATCC 29411 / PCC 7524) TaxID=28072 RepID=K9QN36_NOSS7) HSP 1 Score: 349 bits (896), Expect = 1.130e-104 Identity = 199/513 (38.79%), Postives = 276/513 (53.80%), Query Frame = 2
Query: 449 ESFNWHKQWYPVLSEKDSDPGKAHAVQLLGKDLVVWRNTEGRWSAFDDRCPHRAAPLSEGRVEKDSSLLCAYHAWRFDADGKCLSIPQSDRGGKDET-------NPRACAKLYPTQQAAQDMVWVWGENGPDAVLESLLTKPALVSALEDKEGIKSGRVVPGVVTQRDLAYSWETFWENVMDPAHVVVSHHGLMGKRSM-AKPLDLEATPQPAMTKEGFVVDNNSPQFGAKQGVATFVPPALVEIATELDDGKTISLVQYNIPTRPGWSRMFNRQLTITPEVVGEIKGDDEKDKKKRTPSLLQLVARISPVKLKLAPNEQRAWIQHMFSHMFVHQDMPLLYHQEKIMASSGHTGAKWSDGIYTPTTSDKGIHTLRKWIKKFGSGGPPWPKGYDTSLPSRHDNPDVMWDIYEQHTKHCTTCLGALKRVEQCITAAKVSTVASLTWAVLRAASAISTSILASPGT----PPSNFVAAKAMLPGVMLMLASLKAAKMLGSLRQMFYVYKYIHQEHD 1951
E F+W KQWYPV + DP + H +QLLG+D+V+WR+ G+W F+D CPHR APLSEGRVE D +LLCAYHAWRFDA GKC+SIPQS +DE NP++CA +YPTQ+ Q ++WVW E+G A +ES L P L++ LED SG+V RDL Y W+ F ENV DPAHV VSHHG++G R AK D+ + T+EGF +Q V F PP + IAT DG + L Y PTRPGW R Q+ + K+ + + P L P W+ H+ + +F+HQDM L++QEK +A KW D ++TP DK + TLR+W++K GG PW +GY LP+ + ++D++ HT+HCT C ALK +++ +A V V L A++ A ++ PP F G++L + + L L ++FYVY++ H +D
Sbjct: 25 EIFSWTKQWYPVAVVEFLDPARPHGMQLLGQDIVLWRDGTGKWRCFEDFCPHRLAPLSEGRVESDGTLLCAYHAWRFDAQGKCVSIPQS----QDEQTAAHHCENPKSCAVVYPTQEC-QGLLWVWAESGEQAQIESQLRTPRLIAELEDS----SGKVEKSPWNFRDLPYGWDYFMENVADPAHVPVSHHGIVGDRYKDAKYYDMIPV-RKMSTEEGFAFALQPTTGNIEQAVHDFQPPCYMRIATTTKDGGQLILALYATPTRPGWCRHIGCQVFV-------------KNSQGKKPQGLSFFGLPLPT-----------WLIHVLASLFLHQDMVFLHYQEKTIAQ--RRKGKWLDAVFTPNPQDKMVITLRQWLEKRAGGGIPWAEGYSHDLPTAETDKQKLFDVWTTHTQHCTVCQKALKNIKRLSVSAYVVAVVCLFLAIMLDARVVAMQAALGKSMFAIFPPIGFWLTLGS--GILLAIIGYQ----LKRLSRLFYVYEFEHARND 495
BLAST of mRNA_Ecto-sp13_S_contig179.5453.1 vs. uniprot
Match: A0A563VJP5_9CYAN (Ring-hydroxylating dioxygenase, large terminal subunit n=1 Tax=Hyella patelloides LEGE 07179 TaxID=945734 RepID=A0A563VJP5_9CYAN) HSP 1 Score: 346 bits (888), Expect = 1.650e-103 Identity = 194/516 (37.60%), Postives = 275/516 (53.29%), Query Frame = 2
Query: 437 KANEESFNWHKQWYPVLSEKDSDPGKAHAVQLLGKDLVVWRNTEGRWSAFDDRCPHRAAPLSEGRVEKDSSLLCAYHAWRFDADGKCLSIPQS---DRGGKDETNPRACAKLYPTQQAAQDMVWVWGENGPDAVLESLLTKPALVSALEDKEGIKSGRVVPGVVTQRDLAYSWETFWENVMDPAHVVVSHHGLMGKR-SMAKPLDLEATPQPAMTKEGFVVDNNSPQFGAKQGVATFVPPALVEIATELDDGKTISLVQYNIPTRPGWSRMFNRQLTITPEVVGEIKGDDEKDKKKRTPSLLQLVARISPVKLKLAPNEQRAWIQHMFSHMFVHQDMPLLYHQEKIMASSGHTGAKWSDGIYTPTTSDKGIHTLRKWIKKFGSGGPPWPKGYDTSLPSRHDNPDVMWDIYEQHTKHCTTCLGALKRVEQCITAAKVSTVASLTWAVLRAASAISTSILASPGT-------PPSNFVAAKAMLPGVMLMLASLKAAKMLGSLRQMFYVYKYIHQEHD 1951
K E +F W KQWYPV + D + H++QLLGKDLV+W++ G+W F+D CPHR APLSEGR+E D +LLCAYHAWRFD DG C+SIPQS + ++ N ++CA +YPTQ+ Q ++WVW E+G +A +ES L P V L++++ +++ RDL Y W+ F ENV DPAHV VSHHG+MG R AK D+ + T+EGF +Q F PP + IAT DG + LV Y IPTRPGW R RQ+ I K D K TP L A P W+ H+ + +F+HQD+ L+HQEKI+A G KW + +YTP DK + R+W+ K GG PW + L + + ++D++ HT+HC C ALK + + + + +A L A+ ++ + P PP F A++ ++L A +L L ++FYVYK+ H ++D
Sbjct: 20 KEAESTFQWTKQWYPVAVAEFLDSSRPHSIQLLGKDLVLWQDNSGQWHCFEDSCPHRLAPLSEGRIESDGTLLCAYHAWRFDGDGNCVSIPQSQDKETESRNCANEKSCAVVYPTQEL-QGLIWVWAESGAEAQVESQLRPPRTVPELDNQDK----KIIKAFWNVRDLPYGWDFFMENVADPAHVSVSHHGIMGSRYEDAKYYDMPRLRE-ISTQEGFAFGVTPTASNIEQAFNDFQPPCHMRIATNYKDGGKLILVLYAIPTRPGWCRHIGRQILI--------KSDAGK-----TPPGLGFFALPMP-----------KWLGHILASLFLHQDLVFLHHQEKIVAKRGQ--GKWLEKVYTPNPQDKAVIAFRQWLAKRAGGGVPWDADCNHQLLNTELEKEKLFDVWTTHTQHCQVCQDALKNINRLTVLSYLGAIACLFLALFLDGRYVAMQAVTEPANVSIWHTLPPLGF--GLAIIGAIILA----TAGYLLKKLSRLFYVYKFSHADND 497
BLAST of mRNA_Ecto-sp13_S_contig179.5453.1 vs. uniprot
Match: UPI001680105C (Rieske 2Fe-2S domain-containing protein n=1 Tax=Anabaena subtropica TaxID=425380 RepID=UPI001680105C) HSP 1 Score: 343 bits (879), Expect = 3.350e-102 Identity = 193/506 (38.14%), Postives = 277/506 (54.74%), Query Frame = 2
Query: 455 FNWHKQWYPVLSEKDSDPGKAHAVQLLGKDLVVWRNTEGRWSAFDDRCPHRAAPLSEGRVEKDSSLLCAYHAWRFDADGKCLSIPQSDRG---GKDETNPRACAKLYPTQQAAQDMVWVWGENGPDAVLESLLTKPALVSALEDKEGIKSGRVVPGVVTQRDLAYSWETFWENVMDPAHVVVSHHGLMGKRSM-AKPLDLEATPQPAMTKEGFVVDNNSPQFGAKQGVATFVPPALVEIATELDDGKTISLVQYNIPTRPGWSRMFNRQLTITPEVVGEIKGDDEKDKKKRTPSLLQLVARISPVKLKLAPNEQRAWIQHMFSHMFVHQDMPLLYHQEKIMASSGHTGAKWSDGIYTPTTSDKGIHTLRKWIKKFGSGGPPWPKGYDTSLPSRHDNPDVMWDIYEQHTKHCTTCLGALKRVEQCITAAKVSTVASLTWAVLRAAS--AISTSILASPGT-PPSNFVAAKAMLPGVMLMLASLKAAKMLGSLRQMFYVYKYIHQEHD 1951
F W KQWYPV + DP + HA+QLLGKD+V+WR+ +W F+D CPHR PLSEGRVE D ++LCAYHAWRFDA G C+S+PQS+ K+ N ++CA +YPTQ+ Q ++WVW E G +A +ES L P LV+ LED S +VV RD+ Y W+ F ENV DPAHV VSHHG++G R AK D+ + T++GF + Q + + F PP ++I + DG + L Y PTRPGW R Q+ + K+ + + P L P W+ H+ + +F+HQD+ L++QEKI+A KW D +YTP DK + TLRKW++K GG PW +GY + +P + ++D++ HT++CT C ALK + + +A V+ L AV+ A A+ ++ AS T PP F A G++L + + L ++FYVY++ H +D
Sbjct: 32 FQWTKQWYPVAVVEYLDPSRPHAMQLLGKDIVLWRDASAQWRCFEDFCPHRLVPLSEGRVEADGTILCAYHAWRFDAQGNCVSMPQSENEQTMAKNCENQKSCAVVYPTQER-QGLLWVWAEAGEEAKVESQLQTPRLVTELEDN----SDKVVKSFWNFRDVPYGWDYFMENVSDPAHVPVSHHGIIGDRYKDAKYYDMIPV-RNISTQDGFAFEIQPTQGNIVKAIHDFQPPCYMKIVSTSQDGGQLILALYATPTRPGWCRHIGCQVFV-------------KNSQGKKPQGLSFFGLPLPT-----------WLGHVLASLFLHQDVVFLHYQEKIIAQ--RRKGKWLDAVYTPNPQDKMVITLRKWLEKRAGGGIPWAEGYSSDIPQAEADKQKLFDVWTTHTQNCTVCQNALKNINRLTVSAYVAAAMCLFLAVILDARTVAVQAALGASVFTIPPMEFWLALG--GGILLAVVGYQ----LKRFSRLFYVYEFEHARND 499
BLAST of mRNA_Ecto-sp13_S_contig179.5453.1 vs. uniprot
Match: A0A1J1LET3_9CYAN (Rieske (2Fe-2S) region n=3 Tax=Planktothrix TaxID=54304 RepID=A0A1J1LET3_9CYAN) HSP 1 Score: 342 bits (876), Expect = 5.510e-102 Identity = 195/506 (38.54%), Postives = 275/506 (54.35%), Query Frame = 2
Query: 449 ESFNWHKQWYPVLSEKDSDPGKAHAVQLLGKDLVVWRNTEGRWSAFDDRCPHRAAPLSEGRVEKDSSLLCAYHAWRFDADGKCLSIPQS---DRGGKDETNPRACAKLYPTQQAAQDMVWVWGENGPDAVLESLLTKPALVSALEDKEGIKSGRVVPGVVTQRDLAYSWETFWENVMDPAHVVVSHHGLMGKRSM-AKPLDLEATPQPAMTKEGFVVDNNSPQFGAKQGVATFVPPALVEI-ATELDDGKTISLVQYNIPTRPGWSRMFNRQLTITPEVVGEIKGDDEKDKKKRTPSLLQLVARISPVKLKLAPNEQRAWIQHMFSHMFVHQDMPLLYHQEKIMASSGHTGAKWSDGIYTPTTSDKGIHTLRKWIKKFGSGGPPWPKGYDTSLPSRHDNPDVMWDIYEQHTKHCTTCLGALKRVEQCITAAKVSTVASLTWAVLRAASAISTSILASPGTPPSNFVAAKAMLPGVMLMLASLKAAKMLGSLRQMFYVYKYIHQEHD 1951
E F W KQWYPV + + DP + H VQLLGKD+V+WR+ G+W F D CPHR PLSEGRVE D +LLCAYHAWRFD +G C+SIPQS + K +NP++CA +YPTQ+ Q ++WVWGE+G +A ESLL P L+ LE+ S ++V + RD+ Y W+ F EN+ DPAHV VSHHG++G R AK D+ + + T+EGF Q + V F PP +I AT +D GK I L Y PTRPGW R F RQ+ I K K+ +TP + A P+ W+ H+ + +F+HQD+ L++QEKI+A +W + ++TP DK + T R+WI+K GG PW + D LP N ++D++ HT+HC C ALK + + + + + V+ A + PP F +L G + A+ A L ++FY+Y++ H +D
Sbjct: 21 EQFQWTKQWYPVAAVEFIDPTRPHPVQLLGKDVVLWRDASGQWRCFADACPHRLVPLSEGRVESDGTLLCAYHAWRFDGEGNCVSIPQSQDSETEAKHCSNPKSCAVVYPTQER-QGLLWVWGESGSEAQQESLLKSPRLIPELEEN----SDQIVKLPWSFRDIPYGWDFFMENISDPAHVPVSHHGIIGNRYKDAKYYDMISL-RKISTQEGFAFKIIPTQPHVVEAVHDFQPPCHQKIYATNVDGGKMI-LALYATPTRPGWCRTFGRQILI-------------KSKQGKTPGGIGFFALPMPI-----------WLNHVLAPLFMHQDLVFLHYQEKILAK--RKNKRWLEEVFTPNPQDKMVITFRQWIEKRAGGGIPWSEECDPHLPLPELNKQQLFDVWSTHTQHCQVCQNALKNINRLTVFSYIMAIVCFGLGVMVDARTVGQ----LTAFPPIGFW----VLLGCAIAFAT--AGYYLKKFSRLFYIYEFEHTHND 483 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig179.5453.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig179.5453.1 >prot_Ecto-sp13_S_contig179.5453.1 ID=prot_Ecto-sp13_S_contig179.5453.1|Name=mRNA_Ecto-sp13_S_contig179.5453.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=584bp MQLSWRCRKMRHPVPGRAVVLLFGAISLAEGFSLVRLPPTACSSSSSSSSback to top mRNA from alignment at Ecto-sp13_S_contig179:7995..19376- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig179.5453.1 ID=mRNA_Ecto-sp13_S_contig179.5453.1|Name=mRNA_Ecto-sp13_S_contig179.5453.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=11382bp|location=Sequence derived from alignment at Ecto-sp13_S_contig179:7995..19376- (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig179:7995..19376- >mRNA_Ecto-sp13_S_contig179.5453.1 ID=mRNA_Ecto-sp13_S_contig179.5453.1|Name=mRNA_Ecto-sp13_S_contig179.5453.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=1752bp|location=Sequence derived from alignment at Ecto-sp13_S_contig179:7995..19376- (Ectocarpus species13 EcNAP12_S_4_19m)back to top |