prot_Ecto-sp13_S_contig179.5451.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig179.5451.1
Unique Nameprot_Ecto-sp13_S_contig179.5451.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length400
Homology
BLAST of mRNA_Ecto-sp13_S_contig179.5451.1 vs. uniprot
Match: D7FVR6_ECTSI (Guanosine-3',5'-bis(Diphosphate) 3'-pyrophosphohydrolase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FVR6_ECTSI)

HSP 1 Score: 617 bits (1592), Expect = 2.380e-214
Identity = 383/397 (96.47%), Postives = 389/397 (97.98%), Query Frame = 0
Query:    1 MGFNHVYLIGLLLCGSSSLGCHALQVGGRVRIVKGRRASTTVPSNGRPEVHISKARIKGGRSRAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX-MVKSNSTASMKLMARMRRKMKDARHVPDVSKMLRDGLPYLTEIEATEVQLALAVSIYAHSKTTPTGSDTSSSADGHPDDRVKAGVEVCLQLGRLGMGRDALLAAILGGVLRPETAKQHSTHPGFGRAPVTVVDIREGFGKNVARLVAGLEHVTCVEETAHAVLRGTPSSGSSVGDVSGATSLERARSSEGEGGGQDEEGEPLSPAMLIGARERLPAEPGGWGGRGRGRKTRSLKEASALEQGESLRNLIVSEAADWQVLTLRLAVQLQALKNSSPDGSSWKDKQV 396
            MGFNHVYLIGLLLCGSSSLGCHALQ GGRVRIV+GRRASTTVPSNGRPE HISKARIKGGRSRAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX MVKSNSTASMKLMAR+RRKMKDARHVPDVSKMLRDGLPYLTEIEATEVQLALAVSIYAHSKTT TGSDTSSSADGHPDDRVKAGVEVCLQLGRLGMGRDALLAAILGGVLRPETAKQHSTHPGFGRAPVTVVDIREGFGKNVARLVAGLEHVTCVEETAHAVLRGTPSSGSSVGD+SGAT+ ERAR  EGEGGGQDEEG PLSPAMLIGARERLPAEPGGWGGRGRGRKTRSL+EASALEQGESLRNLIVSEAADWQVLTLRLAVQLQALKNSSPDGSSWKDKQ+
Sbjct:    1 MGFNHVYLIGLLLCGSSSLGCHALQAGGRVRIVEGRRASTTVPSNGRPEGHISKARIKGGRSRAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXMVKSNSTASMKLMARLRRKMKDARHVPDVSKMLRDGLPYLTEIEATEVQLALAVSIYAHSKTTATGSDTSSSADGHPDDRVKAGVEVCLQLGRLGMGRDALLAAILGGVLRPETAKQHSTHPGFGRAPVTVVDIREGFGKNVARLVAGLEHVTCVEETAHAVLRGTPSSGSSVGDMSGATASERARPLEGEGGGQDEEGAPLSPAMLIGARERLPAEPGGWGGRGRGRKTRSLREASALEQGESLRNLIVSEAADWQVLTLRLAVQLQALKNSSPDGSSWKDKQL 397          
BLAST of mRNA_Ecto-sp13_S_contig179.5451.1 vs. uniprot
Match: A0A6H5KUK5_9PHAE (RelA_SpoT domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KUK5_9PHAE)

HSP 1 Score: 595 bits (1534), Expect = 8.200e-206
Identity = 376/403 (93.30%), Postives = 385/403 (95.53%), Query Frame = 0
Query:    1 MGFNHVYLIGLLLCGSSSLGCHALQVGGRVRIVKGRRASTTVPSNGRPEVHISKARIKGGRSRAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX-MVKSNSTASMKLMARMRRKMKDARHVPDVSKMLRDGLPYLTEIEATEVQLALAVSIYAHSKTTPTGSDTSSSADGHPDDRVKAGVEVCLQLGRLGMGRDALLAAILGGVLRPETAKQHSTHPGFGRAPVTVVDIREGFGKNVARLVAGLEHVTCVEETAHAVLRGTPSSGSSVGDVSGATSLERARSSEGEGGGQDEEGEPLSPAMLIGARERLPAEPGGWGGRGRGRKTRSLKEASALEQ------GESLRNLIVSEAADWQVLTLRLAVQLQALKNSSPDGSSWKDKQV 396
            +GFNHVYLIGLLLCGSSSLGCHALQ GGRVRIVKGRRASTTVPSNG P+VHISKARIKGGRSRAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX MVKSNSTASMKLMAR+RRKMKDARHVPDVSKMLRDGLPYLTEIEATEVQLALAVSIYAHSKTT TGSDTSSSADGH DDRVKAGVEVCLQLGRLGMGRDALLAAILGGVLRPET KQHSTHPGFGRAPVTVVDIREGFGKNVARLVAGLEHVTCVEETAHAVLRGTPSSGSSVG+ SGAT+ ERAR  EGEGGGQ+EEGEPLSPAMLIGARER PAEPGGWGGRGRGRKTRSL+EASALEQ      GESLRNLIVSEAADWQVLTLRLAVQLQALKNS+ DGSSWKD+QV
Sbjct:    2 LGFNHVYLIGLLLCGSSSLGCHALQAGGRVRIVKGRRASTTVPSNGYPQVHISKARIKGGRSRAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXMVKSNSTASMKLMARLRRKMKDARHVPDVSKMLRDGLPYLTEIEATEVQLALAVSIYAHSKTTATGSDTSSSADGHLDDRVKAGVEVCLQLGRLGMGRDALLAAILGGVLRPETVKQHSTHPGFGRAPVTVVDIREGFGKNVARLVAGLEHVTCVEETAHAVLRGTPSSGSSVGNRSGATASERARPLEGEGGGQEEEGEPLSPAMLIGARERSPAEPGGWGGRGRGRKTRSLREASALEQKRSKIVGESLRNLIVSEAADWQVLTLRLAVQLQALKNSTSDGSSWKDQQV 404          
BLAST of mRNA_Ecto-sp13_S_contig179.5451.1 vs. uniprot
Match: A0A6H5JUF6_9PHAE (RelA_SpoT domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JUF6_9PHAE)

HSP 1 Score: 116 bits (290), Expect = 1.570e-24
Identity = 93/251 (37.05%), Postives = 114/251 (45.42%), Query Frame = 0
Query:  138 PDVSKMLRDGLPYLTEIEATEVQLALAVSIYAHSKTTPTGSDTSSSADGHPDDRVKAGVEVCLQLGRLGMGRDALLAAILGGVLRPETAKQHSTHPGFGRAPVTVVDIREGFGKNVARLVAGLEHVTCVEETAHAVLRGTPSSGSSVGDVSGATSLERARSSEGEGGGQDEEGEPLSPAMLIGARERLPAEPGGWGGRGRGRKTRSLKEASALEQGES----LRNLIVSEAADWQVLTLRLAVQLQALKNS 384
            PD+S+ L DGL YL   E  EVQ ALA+SIYAHS         +S   G     VK GVE CL LG L +G DALLAAIL GVLRP    +      FG+A VTV DI EGFG  VAR V   +HV  +EE                                                    AR R+             R    + + + L+ G+     LR LI+SEA+DWQVLTL LAV +Q L+++
Sbjct:   99 PDLSQKLSDGLSYLNADEMEEVQQALAMSIYAHS--------VNSRRAGSGYKAVKTGVEACLILGELQVGTDALLAAILSGVLRPRAQSKE-----FGQAAVTVADIEEGFGARVARSVENFDHVMRLEEM---------------------------------------------------ARRRMSR-----------RAAEDVDDEADLDTGKKQRHYLRELIISEASDWQVLTLYLAVHMQKLRSA 274          
BLAST of mRNA_Ecto-sp13_S_contig179.5451.1 vs. uniprot
Match: A0A836CJV0_9STRA (RelA_SpoT domain-containing protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CJV0_9STRA)

HSP 1 Score: 78.2 bits (191), Expect = 6.700e-12
Identity = 61/159 (38.36%), Postives = 81/159 (50.94%), Query Frame = 0
Query:  139 DVSKMLRDGLPYLTEIEATEVQLALAVSIYAHSKTTPTGSDTSSSADGHPDDRVKAGVEVCLQLGRLGMGRDALLAAILGGVLRPETAKQHSTHPGFGRAPVTVVDIREGFGKNVARLVAGLEHVTCVEETAHAVLRGTPSSGSSVGDVSGATSLERAR 297
            D+   LR+GLPYL ++E  E+Q ALAV++  H  T           +G   +RV   V +CL LG L M  DALLAAIL G L PE           G A  +  D++  FG+ V RLV   EHV  +E  A + LR   +S ++ G    A  L+R R
Sbjct:  119 DLVDKLREGLPYLGQVEHAELQRALAVALRVHGGT----------REGR--ERVAHSVSMCLILGELEMDVDALLAAILAGTLSPERGP-------VGVAGASSQDLQRRFGRRVVRLVESYEHVARLETLAQSYLR---ASSAAQGPEEAAEQLDRLR 255          
BLAST of mRNA_Ecto-sp13_S_contig179.5451.1 vs. uniprot
Match: A0A836CGU9_9STRA (RelA_SpoT domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CGU9_9STRA)

HSP 1 Score: 68.2 bits (165), Expect = 1.120e-8
Identity = 59/192 (30.73%), Postives = 80/192 (41.67%), Query Frame = 0
Query:  191 RVKAGVEVCLQLGRLGMGRDALLAAILGGVLRPETAKQHSTHPGFGRAPVTVVDIREGFGKNVARLVAGLEHVTCVEETAHAVLRGTPSSGSSVGDVSGATSLERARSSEGEGGGQDEEGEPLSPAMLIGARERLPAEPGGWGGRGRGRKTRSLKEASALEQGESLRNLIVSEAADWQVLTLRLAVQLQALK 382
            R +  V++CL LG L M  DALLAAIL G L PE   Q       G A  +V D++  FG+ V RLV   E VT +E+ A   +                   ERA  ++G+                                         +    A EQ + LRNLI+SE ADW+V+ LR+A  LQ ++
Sbjct:  149 RTENAVDMCLVLGELDMDVDALLAAILTGTLNPE---QGPLGKAMGVAGASVQDLQRRFGRRVVRLVQSYERVTRLEQLAQRYM------------------AERAAKAKGK-----------------------------------------VSSEEAAEQMDRLRNLILSETADWRVVILRVASHLQRMR 278          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig179.5451.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 5
Match NameE-valueIdentityDescription
D7FVR6_ECTSI2.380e-21496.47Guanosine-3',5'-bis(Diphosphate) 3'-pyrophosphohyd... [more]
A0A6H5KUK5_9PHAE8.200e-20693.30RelA_SpoT domain-containing protein n=1 Tax=Ectoca... [more]
A0A6H5JUF6_9PHAE1.570e-2437.05RelA_SpoT domain-containing protein n=1 Tax=Ectoca... [more]
A0A836CJV0_9STRA6.700e-1238.36RelA_SpoT domain-containing protein (Fragment) n=1... [more]
A0A836CGU9_9STRA1.120e-830.73RelA_SpoT domain-containing protein n=1 Tax=Tribon... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..7
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..23
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 24..399
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 20..23
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 8..19
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..23
score: 0.752

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig179contigEcto-sp13_S_contig179:94..3097 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig179.5451.1mRNA_Ecto-sp13_S_contig179.5451.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig179 94..3418 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig179.5451.1 ID=prot_Ecto-sp13_S_contig179.5451.1|Name=mRNA_Ecto-sp13_S_contig179.5451.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=400bp
MGFNHVYLIGLLLCGSSSLGCHALQVGGRVRIVKGRRASTTVPSNGRPEV
HISKARIKGGRSRAAAGGGRAGRRASLPTTTGQASHGGTNSSGGVSEGNS
RIAGGGGQRRKMVKSNSTASMKLMARMRRKMKDARHVPDVSKMLRDGLPY
LTEIEATEVQLALAVSIYAHSKTTPTGSDTSSSADGHPDDRVKAGVEVCL
QLGRLGMGRDALLAAILGGVLRPETAKQHSTHPGFGRAPVTVVDIREGFG
KNVARLVAGLEHVTCVEETAHAVLRGTPSSGSSVGDVSGATSLERARSSE
GEGGGQDEEGEPLSPAMLIGARERLPAEPGGWGGRGRGRKTRSLKEASAL
EQGESLRNLIVSEAADWQVLTLRLAVQLQALKNSSPDGSSWKDKQVNCV*
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