mRNA_Ecto-sp13_S_contig179.5451.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp13_S_contig179.5451.1
Unique NamemRNA_Ecto-sp13_S_contig179.5451.1
TypemRNA
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Homology
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BLAST of mRNA_Ecto-sp13_S_contig179.5451.1 vs. uniprot
Match: D7FVR6_ECTSI (Guanosine-3',5'-bis(Diphosphate) 3'-pyrophosphohydrolase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FVR6_ECTSI)

HSP 1 Score: 617 bits (1590), Expect = 5.910e-213
Identity = 383/397 (96.47%), Postives = 389/397 (97.98%), Query Frame = 3 
Query:  198 MGFNHVYLIGLLLCGSSSLGCHALQVGGRVRIVKGRRASTTVPSNGRPEVHISKARIKGGRSRAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX-MVKSNSTASMKLMARMRRKMKDARHVPDVSKMLRDGLPYLTEIEATEVQLALAVSIYAHSKTTPTGSDTSSSADGHPDDRVKAGVEVCLQLGRLGMGRDALLAAILGGVLRPETAKQHSTHPGFGRAPVTVVDIREGFGKNVARLVAGLEHVTCVEETAHAVLRGTPSSGSSVGDVSGATSLERARSSEGEGGGQDEEGEPLSPAMLIGARERLPAEPGGWGGRGRGRKTRSLKEASALEQGESLRNLIVSEAADWQVLTLRLAVQLQALKNSSPDGSSWKDKQV 1385
            MGFNHVYLIGLLLCGSSSLGCHALQ GGRVRIV+GRRASTTVPSNGRPE HISKARIKGGRSRAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX MVKSNSTASMKLMAR+RRKMKDARHVPDVSKMLRDGLPYLTEIEATEVQLALAVSIYAHSKTT TGSDTSSSADGHPDDRVKAGVEVCLQLGRLGMGRDALLAAILGGVLRPETAKQHSTHPGFGRAPVTVVDIREGFGKNVARLVAGLEHVTCVEETAHAVLRGTPSSGSSVGD+SGAT+ ERAR  EGEGGGQDEEG PLSPAMLIGARERLPAEPGGWGGRGRGRKTRSL+EASALEQGESLRNLIVSEAADWQVLTLRLAVQLQALKNSSPDGSSWKDKQ+
Sbjct:    1 MGFNHVYLIGLLLCGSSSLGCHALQAGGRVRIVEGRRASTTVPSNGRPEGHISKARIKGGRSRAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXMVKSNSTASMKLMARLRRKMKDARHVPDVSKMLRDGLPYLTEIEATEVQLALAVSIYAHSKTTATGSDTSSSADGHPDDRVKAGVEVCLQLGRLGMGRDALLAAILGGVLRPETAKQHSTHPGFGRAPVTVVDIREGFGKNVARLVAGLEHVTCVEETAHAVLRGTPSSGSSVGDMSGATASERARPLEGEGGGQDEEGAPLSPAMLIGARERLPAEPGGWGGRGRGRKTRSLREASALEQGESLRNLIVSEAADWQVLTLRLAVQLQALKNSSPDGSSWKDKQL 397
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BLAST of mRNA_Ecto-sp13_S_contig179.5451.1 vs. uniprot
Match: A0A6H5KUK5_9PHAE (RelA_SpoT domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KUK5_9PHAE)

HSP 1 Score: 594 bits (1532), Expect = 2.010e-204
Identity = 376/403 (93.30%), Postives = 385/403 (95.53%), Query Frame = 3 
Query:  198 MGFNHVYLIGLLLCGSSSLGCHALQVGGRVRIVKGRRASTTVPSNGRPEVHISKARIKGGRSRAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX-MVKSNSTASMKLMARMRRKMKDARHVPDVSKMLRDGLPYLTEIEATEVQLALAVSIYAHSKTTPTGSDTSSSADGHPDDRVKAGVEVCLQLGRLGMGRDALLAAILGGVLRPETAKQHSTHPGFGRAPVTVVDIREGFGKNVARLVAGLEHVTCVEETAHAVLRGTPSSGSSVGDVSGATSLERARSSEGEGGGQDEEGEPLSPAMLIGARERLPAEPGGWGGRGRGRKTRSLKEASALEQ------GESLRNLIVSEAADWQVLTLRLAVQLQALKNSSPDGSSWKDKQV 1385
            +GFNHVYLIGLLLCGSSSLGCHALQ GGRVRIVKGRRASTTVPSNG P+VHISKARIKGGRSRAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX MVKSNSTASMKLMAR+RRKMKDARHVPDVSKMLRDGLPYLTEIEATEVQLALAVSIYAHSKTT TGSDTSSSADGH DDRVKAGVEVCLQLGRLGMGRDALLAAILGGVLRPET KQHSTHPGFGRAPVTVVDIREGFGKNVARLVAGLEHVTCVEETAHAVLRGTPSSGSSVG+ SGAT+ ERAR  EGEGGGQ+EEGEPLSPAMLIGARER PAEPGGWGGRGRGRKTRSL+EASALEQ      GESLRNLIVSEAADWQVLTLRLAVQLQALKNS+ DGSSWKD+QV
Sbjct:    2 LGFNHVYLIGLLLCGSSSLGCHALQAGGRVRIVKGRRASTTVPSNGYPQVHISKARIKGGRSRAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXMVKSNSTASMKLMARLRRKMKDARHVPDVSKMLRDGLPYLTEIEATEVQLALAVSIYAHSKTTATGSDTSSSADGHLDDRVKAGVEVCLQLGRLGMGRDALLAAILGGVLRPETVKQHSTHPGFGRAPVTVVDIREGFGKNVARLVAGLEHVTCVEETAHAVLRGTPSSGSSVGNRSGATASERARPLEGEGGGQEEEGEPLSPAMLIGARERSPAEPGGWGGRGRGRKTRSLREASALEQKRSKIVGESLRNLIVSEAADWQVLTLRLAVQLQALKNSTSDGSSWKDQQV 404
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BLAST of mRNA_Ecto-sp13_S_contig179.5451.1 vs. uniprot
Match: A0A6H5JUF6_9PHAE (RelA_SpoT domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JUF6_9PHAE)

HSP 1 Score: 116 bits (290), Expect = 4.090e-24
Identity = 93/251 (37.05%), Postives = 114/251 (45.42%), Query Frame = 3 
Query:  609 PDVSKMLRDGLPYLTEIEATEVQLALAVSIYAHSKTTPTGSDTSSSADGHPDDRVKAGVEVCLQLGRLGMGRDALLAAILGGVLRPETAKQHSTHPGFGRAPVTVVDIREGFGKNVARLVAGLEHVTCVEETAHAVLRGTPSSGSSVGDVSGATSLERARSSEGEGGGQDEEGEPLSPAMLIGARERLPAEPGGWGGRGRGRKTRSLKEASALEQGES----LRNLIVSEAADWQVLTLRLAVQLQALKNS 1349
            PD+S+ L DGL YL   E  EVQ ALA+SIYAHS         +S   G     VK GVE CL LG L +G DALLAAIL GVLRP    +      FG+A VTV DI EGFG  VAR V   +HV  +EE                                                    AR R+             R    + + + L+ G+     LR LI+SEA+DWQVLTL LAV +Q L+++
Sbjct:   99 PDLSQKLSDGLSYLNADEMEEVQQALAMSIYAHS--------VNSRRAGSGYKAVKTGVEACLILGELQVGTDALLAAILSGVLRPRAQSKE-----FGQAAVTVADIEEGFGARVARSVENFDHVMRLEEM---------------------------------------------------ARRRMSR-----------RAAEDVDDEADLDTGKKQRHYLRELIISEASDWQVLTLYLAVHMQKLRSA 274
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BLAST of mRNA_Ecto-sp13_S_contig179.5451.1 vs. uniprot
Match: A0A836CJV0_9STRA (RelA_SpoT domain-containing protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CJV0_9STRA)

HSP 1 Score: 78.2 bits (191), Expect = 1.100e-11
Identity = 61/159 (38.36%), Postives = 81/159 (50.94%), Query Frame = 3 
Query:  612 DVSKMLRDGLPYLTEIEATEVQLALAVSIYAHSKTTPTGSDTSSSADGHPDDRVKAGVEVCLQLGRLGMGRDALLAAILGGVLRPETAKQHSTHPGFGRAPVTVVDIREGFGKNVARLVAGLEHVTCVEETAHAVLRGTPSSGSSVGDVSGATSLERAR 1088
            D+   LR+GLPYL ++E  E+Q ALAV++  H  T           +G   +RV   V +CL LG L M  DALLAAIL G L PE           G A  +  D++  FG+ V RLV   EHV  +E  A + LR   +S ++ G    A  L+R R
Sbjct:  119 DLVDKLREGLPYLGQVEHAELQRALAVALRVHGGT----------REGR--ERVAHSVSMCLILGELEMDVDALLAAILAGTLSPERGP-------VGVAGASSQDLQRRFGRRVVRLVESYEHVARLETLAQSYLR---ASSAAQGPEEAAEQLDRLR 255
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BLAST of mRNA_Ecto-sp13_S_contig179.5451.1 vs. uniprot
Match: A0A836CGU9_9STRA (RelA_SpoT domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CGU9_9STRA)

HSP 1 Score: 68.2 bits (165), Expect = 1.650e-8
Identity = 59/192 (30.73%), Postives = 80/192 (41.67%), Query Frame = 3 
Query:  768 RVKAGVEVCLQLGRLGMGRDALLAAILGGVLRPETAKQHSTHPGFGRAPVTVVDIREGFGKNVARLVAGLEHVTCVEETAHAVLRGTPSSGSSVGDVSGATSLERARSSEGEGGGQDEEGEPLSPAMLIGARERLPAEPGGWGGRGRGRKTRSLKEASALEQGESLRNLIVSEAADWQVLTLRLAVQLQALK 1343
            R +  V++CL LG L M  DALLAAIL G L PE   Q       G A  +V D++  FG+ V RLV   E VT +E+ A   +                   ERA  ++G+                                         +    A EQ + LRNLI+SE ADW+V+ LR+A  LQ ++
Sbjct:  149 RTENAVDMCLVLGELDMDVDALLAAILTGTLNPE---QGPLGKAMGVAGASVQDLQRRFGRRVVRLVQSYERVTRLEQLAQRYM------------------AERAAKAKGK-----------------------------------------VSSEEAAEQMDRLRNLILSETADWRVVILRVASHLQRMR 278
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig179.5451.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 5
Match NameE-valueIdentityDescription
D7FVR6_ECTSI5.910e-21396.47Guanosine-3',5'-bis(Diphosphate) 3'-pyrophosphohyd... [more]
A0A6H5KUK5_9PHAE2.010e-20493.30RelA_SpoT domain-containing protein n=1 Tax=Ectoca... [more]
A0A6H5JUF6_9PHAE4.090e-2437.05RelA_SpoT domain-containing protein n=1 Tax=Ectoca... [more]
A0A836CJV0_9STRA1.100e-1138.36RelA_SpoT domain-containing protein (Fragment) n=1... [more]
A0A836CGU9_9STRA1.650e-830.73RelA_SpoT domain-containing protein n=1 Tax=Tribon... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig179contigEcto-sp13_S_contig179:94..3418 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop1
Start1
Seed ortholog score627.5
Seed ortholog evalue4.3e-177
Seed eggNOG ortholog2880.D7FVR6
Model size1397
KEGG rclassRC00002,RC00078
KEGG koko:K00951
KEGG ReactionR00429
KEGG Pathwayko00230,map00230
Hectar predicted targeting categorysignal peptide
Exons5
EggNOG free text desc.HD domain containing 3
EggNOG OGsCOG0317@1,KOG1157@2759
EC2.7.6.5
Cds size1200
COG Functional cat.KT
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko01000
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig179.5451.1prot_Ecto-sp13_S_contig179.5451.1Ectocarpus species13 EcNAP12_S_4_19mpolypeptideEcto-sp13_S_contig179 94..3097 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681462926.205649-CDS-Ecto-sp13_S_contig179:93..2371681462926.205649-CDS-Ecto-sp13_S_contig179:93..237Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig179 94..237 -
1681462926.2162328-CDS-Ecto-sp13_S_contig179:795..12721681462926.2162328-CDS-Ecto-sp13_S_contig179:795..1272Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig179 796..1272 -
1681462926.224003-CDS-Ecto-sp13_S_contig179:1667..18561681462926.224003-CDS-Ecto-sp13_S_contig179:1667..1856Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig179 1668..1856 -
1681462926.231624-CDS-Ecto-sp13_S_contig179:2707..30971681462926.231624-CDS-Ecto-sp13_S_contig179:2707..3097Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig179 2708..3097 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681462926.239176-UTR-Ecto-sp13_S_contig179:3097..32611681462926.239176-UTR-Ecto-sp13_S_contig179:3097..3261Ectocarpus species13 EcNAP12_S_4_19mUTREcto-sp13_S_contig179 3098..3261 -
1681462926.2468328-UTR-Ecto-sp13_S_contig179:3385..34181681462926.2468328-UTR-Ecto-sp13_S_contig179:3385..3418Ectocarpus species13 EcNAP12_S_4_19mUTREcto-sp13_S_contig179 3386..3418 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp13_S_contig179.5451.1

>prot_Ecto-sp13_S_contig179.5451.1 ID=prot_Ecto-sp13_S_contig179.5451.1|Name=mRNA_Ecto-sp13_S_contig179.5451.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=400bp
MGFNHVYLIGLLLCGSSSLGCHALQVGGRVRIVKGRRASTTVPSNGRPEV
HISKARIKGGRSRAAAGGGRAGRRASLPTTTGQASHGGTNSSGGVSEGNS
RIAGGGGQRRKMVKSNSTASMKLMARMRRKMKDARHVPDVSKMLRDGLPY
LTEIEATEVQLALAVSIYAHSKTTPTGSDTSSSADGHPDDRVKAGVEVCL
QLGRLGMGRDALLAAILGGVLRPETAKQHSTHPGFGRAPVTVVDIREGFG
KNVARLVAGLEHVTCVEETAHAVLRGTPSSGSSVGDVSGATSLERARSSE
GEGGGQDEEGEPLSPAMLIGARERLPAEPGGWGGRGRGRKTRSLKEASAL
EQGESLRNLIVSEAADWQVLTLRLAVQLQALKNSSPDGSSWKDKQVNCV*
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mRNA from alignment at Ecto-sp13_S_contig179:94..3418-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp13_S_contig179.5451.1 ID=mRNA_Ecto-sp13_S_contig179.5451.1|Name=mRNA_Ecto-sp13_S_contig179.5451.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=3325bp|location=Sequence derived from alignment at Ecto-sp13_S_contig179:94..3418- (Ectocarpus species13 EcNAP12_S_4_19m)
GTGGTGGACAGGATCTCTGCTCCCTGACACAAGGTAGGCACGGCCTGGCA
GAATGACTGGCAGTTTTTTTCCTGTCGTCGGGTTCGGAAGCGGGGCATTT
AGCAATTTTTGTGTGTTGTTCCTCATCTGCCGTTTTCTCTCGCCGTTGTT
CTGGAAGGTACTTTCGGTCGGGAGACCGTGTCGTCGGAGAGGAGGAAGGC
GTCTAGAGATCTGTCTGCATAGTTTATCAGGAGCAGCTACATCGTCTCGT
ACAGCGGAGGTGCACAATCAGCCTGGGTCTAGAATAACGTGGTGCTGTTG
CTGTGCAGGAGAAGGTTCTCCATGGGCTTCAACCACGTCTATCTCATCGG
GTTGCTTCTCTGCGGATCCTCATCGTTGGGTTGCCATGCACTGCAAGTCG
GGGGGAGGGTGCGAATTGTCAAAGGGCGGAGGGCGTCAACCACTGTACCA
AGTAACGGACGCCCTGAGGTCCACATCAGCAAGGCGCGTATCAAGGGCGG
TAGGAGTAGAGCGGCGGCAGGGGGGGGAAGAGCAGGCAGACGAGCGAGCT
TGCCTACAACAACTGGCCAAGCATCACATGGCGGCACCAACTCGTCTGGT
GGTGTCTCGGAGGGCAACAGCAGGATAGCTGGCGGCGGTGGGCAGCGAAG
GAAGATGGTGAAGAGCAACTCGACAGCCAGCATGAAGCTCATGGCACGGA
TGCGCAGAAAGGTTGGTCTTGTGATTCTGCGCCAGGTCAGGTCGTGTCTT
GTGGTGGTTGTTGGCGTATGTCTTGGTTCCAGGGGTACGCAGCCATGCCA
GCGAAGTCAGTTGCGGCGCAAACACAAACAAGAAGAACGAGTTTCAACGC
CCCTCGTGCTGTTTCACGAAGGCCAGGAGGCTCGCAAGAGGCGTAAGGTG
CTACACAAAACGACCCTCCTGCTGTCCTTTGTAGTGCTGCCAAGAGGCTT
ACCTCGAACAGCGGTGCACGTGGGTTGTAGCAACTGTGGTCGGGGACCAG
ATGAGGATCGGCAGGGTCCCTTTCACATGAGCAGGCCTAGTGGGTGGGTA
CAAACGGACTTGGTTCAACTGGAGCTCAATAGAATCGCCCAGCCCATAGG
GAGCCAACACCCAAGTAACTCGATAGATTGTTTACCTGTCAAAATTGTTT
GAGTACCGGCGGCTAGCCTTGCAGCACTGGCACGTCGAATGTTCGTCCGA
GTTTTGGCTAGCCTTGCAGCACTGGCACGTCGAATGTTCGTCCGAGTTTT
GACGAAGTACTGGTGAGGACACACGCAATTTCCAACACTGATGTCGGCAC
TGCTGCCTACTGATGCTTCCTGATCCCGAACAGCAACGCTCTTCTGCACG
GACTGTATTGTAATTTGCGTAAGCAGATCGAGATAGGGCGTTGCCGCTAC
TACTGTGGAAACGATCTCCCACGGCAGCGCCTCTACACAGATGCGTTCTT
TCAGCAGTACAAATAATGACTCGCTGTATGCACCATCACCTTGCTTTAAC
TGCTTATACACCATGTCCTTCATGACCCAATGCATTTGTCAATATGCATA
TCGGTTGCGTAGATGAAAGATGCGAGACATGTCCCAGATGTGTCGAAGAT
GCTCCGAGACGGCCTGCCGTACCTGACGGAGATCGAAGCCACGGAGGTGC
AATTGGCCCTTGCCGTGTCCATCTACGCCCACTCCAAGACTACCCCTACC
GGAAGCGATACCAGCAGCAGCGCTGACGGGCATCCCGATGACCGTGTAAA
GGTCAGGCCTCCCAGATCTTTGGTAGGACGGATAACGATCTTGCTACTCT
TCATCGGTAAAAACCATATGTTGAAGGCTGCAAGGTTTTATGTGCAAGAG
TCAGAAAGGTATAAAACTGTTGCAGTGCGCTCGCGCGCCAAGCAATGCTA
GCATTTGTAGAGTGGGGGCAGTGCCGTGGGAGAGCCGGACGGCGGCGTAA
TTAAACATGATAAGCATACTCAGCGGAACGCAACCATCCTTCTCGGAGGG
GTGTTCAGTGCTCAAATCCATCATTCCACTGCCCGACTCCACGCACACCT
GCTATCGGAACACGCAAGGCGGGTGTCGTGCTGTAGGCGGCTCTCGGTTC
AGCGTCGTTGTCTTCTCGTACGTTCCGCTCGACCGATTCTCGACAGGCCG
GTGTAGAGGTGTGCCTCCAGCTCGGTCGGCTAGGCATGGGCAGGGACGCG
CTGCTTGCCGCTATCCTGGGGGGCGTCTTGAGACCAGAGACGGCCAAGCA
GCACTCTACGCACCCCGGGTTCGGCCGCGCACCGGTAACGGTGGTAGATA
TTCGGGAAGGCTTCGGCAAGAACGTGGCTCGCCTGGTCGCTGGGCTGGAG
CACGTGACGTGCGTCGAGGAAACCGCACACGCGGTTCTCAGGGGCACTCC
CAGCAGCGGCTCTTCCGTTGGGGATGTGTCAGGCGCGACGTCGTTAGAGC
GGGCAAGGTCATCGGAGGGGGAGGGGGGGGGACAGGACGAGGAGGGAGAG
CCGCTTTCTCCTGCTATGCTCATTGGGGCACGAGAGAGATTGCCTGCGGA
GCCCGGGGGGTGGGGGGGGAGGGGGAGGGGGAGGAAAACCCGCAGTTTGA
AGGAAGCATCAGCGTTGGAGCAGGTGAAGGAAGGGTTACGCGTTTCGTTT
CAATGTTTGGATGCTCTCTTTTGAGTTCTTTGTTCGATGGCTGCATTCGA
TGGCGCTGTCGTCCGTAGCGTCAACCGTGCATGTCTCTCTGGCACCAACT
ACTTTCGCGTAGACAACATTGACCCAAGCCTGGACAGCGGTGTTTTGCTT
TCCATGCGTTGTACGCAGAAACGAAGCGAGCTTTCAGGAAGCTAGTATGT
GGCCGTGTGTTGAGGAAGTGCAGGTCCGAGAAATGTTTTTGTAAATGGGG
GTGTTTGCGGCGTGGTCTATCTCCTCGCCAAGCTGGATATTCATCGCTGT
GGTGGGTCCACCCATCAGATGCTGTCAGGTGTCGCAAACCACGACATAGT
TCACCATCATCAAGTTCATGCTACAAAACAGAGTCAACGTGGGTATTTTC
AGAGCATTTGGGAATCGGTTTGTCAGTTGAGGCGCGAGATTACGCGCTCG
CGAATGATGGGGTCCACGCAAAAAGTTTACCGATGTCCGTTTTGCTGTGC
TTTCTCTGCACTTTTCTATGTTGTGCCTCAGGGTGAGAGTCTTCGCAACC
TCATCGTGTCGGAGGCTGCAGATTGGCAGGTGCTGACGCTCAGGCTAGCA
GTGCAGCTGCAGGCGCTTAAGAACTCCTCGCCGGATGGCAGCAGCTGGAA
GGACAAACAGGTAAATTGCGTGTGA
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Coding sequence (CDS) from alignment at Ecto-sp13_S_contig179:94..3418-

>mRNA_Ecto-sp13_S_contig179.5451.1 ID=mRNA_Ecto-sp13_S_contig179.5451.1|Name=mRNA_Ecto-sp13_S_contig179.5451.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=1200bp|location=Sequence derived from alignment at Ecto-sp13_S_contig179:94..3418- (Ectocarpus species13 EcNAP12_S_4_19m)
ATGGGCTTCAACCACGTCTATCTCATCGGGTTGCTTCTCTGCGGATCCTC
ATCGTTGGGTTGCCATGCACTGCAAGTCGGGGGGAGGGTGCGAATTGTCA
AAGGGCGGAGGGCGTCAACCACTGTACCAAGTAACGGACGCCCTGAGGTC
CACATCAGCAAGGCGCGTATCAAGGGCGGTAGGAGTAGAGCGGCGGCAGG
GGGGGGAAGAGCAGGCAGACGAGCGAGCTTGCCTACAACAACTGGCCAAG
CATCACATGGCGGCACCAACTCGTCTGGTGGTGTCTCGGAGGGCAACAGC
AGGATAGCTGGCGGCGGTGGGCAGCGAAGGAAGATGGTGAAGAGCAACTC
GACAGCCAGCATGAAGCTCATGGCACGGATGCGCAGAAAGATGAAAGATG
CGAGACATGTCCCAGATGTGTCGAAGATGCTCCGAGACGGCCTGCCGTAC
CTGACGGAGATCGAAGCCACGGAGGTGCAATTGGCCCTTGCCGTGTCCAT
CTACGCCCACTCCAAGACTACCCCTACCGGAAGCGATACCAGCAGCAGCG
CTGACGGGCATCCCGATGACCGTGTAAAGGCCGGTGTAGAGGTGTGCCTC
CAGCTCGGTCGGCTAGGCATGGGCAGGGACGCGCTGCTTGCCGCTATCCT
GGGGGGCGTCTTGAGACCAGAGACGGCCAAGCAGCACTCTACGCACCCCG
GGTTCGGCCGCGCACCGGTAACGGTGGTAGATATTCGGGAAGGCTTCGGC
AAGAACGTGGCTCGCCTGGTCGCTGGGCTGGAGCACGTGACGTGCGTCGA
GGAAACCGCACACGCGGTTCTCAGGGGCACTCCCAGCAGCGGCTCTTCCG
TTGGGGATGTGTCAGGCGCGACGTCGTTAGAGCGGGCAAGGTCATCGGAG
GGGGAGGGGGGGGGACAGGACGAGGAGGGAGAGCCGCTTTCTCCTGCTAT
GCTCATTGGGGCACGAGAGAGATTGCCTGCGGAGCCCGGGGGGTGGGGGG
GGAGGGGGAGGGGGAGGAAAACCCGCAGTTTGAAGGAAGCATCAGCGTTG
GAGCAGGGTGAGAGTCTTCGCAACCTCATCGTGTCGGAGGCTGCAGATTG
GCAGGTGCTGACGCTCAGGCTAGCAGTGCAGCTGCAGGCGCTTAAGAACT
CCTCGCCGGATGGCAGCAGCTGGAAGGACAAACAGGTAAATTGCGTGTGA
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