mRNA_Ecto-sp13_S_contig1789.5450.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig1789.5450.1 vs. uniprot
Match: D7FN52_ECTSI (Heat shock protein 40 n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FN52_ECTSI) HSP 1 Score: 734 bits (1896), Expect = 2.670e-261 Identity = 406/443 (91.65%), Postives = 412/443 (93.00%), Query Frame = 1
Query: 154 MAVLSSAADGGTAQKVASLTWSEETIEVETCGRTYWSFLQRARAIDNKQLGNVSAFTVDDEVDEEEVSEDVDFLLRDDLTPELVPELTHYEILGFEKYGNGVGDEGLKKAYRKAVLKYHPDKTGVQDGEEDEVFMAVQKAFDTLTDMTKRRAYDSSLEFDDN---ELEGKEVSGPTSFYKVYEPVFERNKRFAVILPAPSLGDDDTPIDEVNNFYEYWVNFESWRDFSLEGEHDVEDAHDRYEKRWMIKENDRKSKELKRKEVKRLALLVDRARSSSTSKEYERTEEHEVSDPRRNCEEREKREREQAKIQAVEDEXXXXXXXXXRLRAISRQAKAGREAHKKEMRRRKKVMKNLYSLAVAQLTVGGSGSEAGVTPVGEEDMEWLKENLLLDQLNAAIAALGTEEDIKVEGLDVMKVLMERRKAELKEEEEAAEAKQRADREA 1473
MAVLSSAADGGTAQKVASLTWSEETIEVETCGR+YWSFLQRARAIDNKQLGNVSAFTVDDEVDEEEVSEDVDFLLRDDLTPELVPELTHYEILGFEKYGNGVGDEGLKKAYRKAVLKYHPDKTGVQDGEEDEVFMAVQKAFDTLTDMTKRRAYDSSLEFDD+ ELEGKEVSGPTSFYKVYEPVFERNKRFAVILPAPSLGDDDTPIDEVNNFYEYWVNFESWRDFSLEGEHDVEDAHDRYEKRWMIKENDRKSKELKRKEVKRLALLVDRAR+ ER E E + +EREKREREQ XXXXXXXX RLRAISRQAKAGREAHKKEMRRRKKVMKNLYSLAVAQLTVGGSGSEAGVTPVGEEDMEWLKENLLLDQLNAAI+ALGTEEDIKVEGLDVMKVLMERRKAELKEEEEAAEAKQR DREA
Sbjct: 1 MAVLSSAADGGTAQKVASLTWSEETIEVETCGRSYWSFLQRARAIDNKQLGNVSAFTVDDEVDEEEVSEDVDFLLRDDLTPELVPELTHYEILGFEKYGNGVGDEGLKKAYRKAVLKYHPDKTGVQDGEEDEVFMAVQKAFDTLTDMTKRRAYDSSLEFDDSIPDELEGKEVSGPTSFYKVYEPVFERNKRFAVILPAPSLGDDDTPIDEVNNFYEYWVNFESWRDFSLEGEHDVEDAHDRYEKRWMIKENDRKSKELKRKEVKRLALLVDRARAVDPRIIRERVREREAKIAAKENKEREKREREQXXXXXXXXXXXXXXXXXERLRAISRQAKAGREAHKKEMRRRKKVMKNLYSLAVAQLTVGGSGSEAGVTPVGEEDMEWLKENLLLDQLNAAISALGTEEDIKVEGLDVMKVLMERRKAELKEEEEAAEAKQRTDREA 443
BLAST of mRNA_Ecto-sp13_S_contig1789.5450.1 vs. uniprot
Match: A0A835Z5V4_9STRA (J domain-containing protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z5V4_9STRA) HSP 1 Score: 288 bits (737), Expect = 2.100e-89 Identity = 152/288 (52.78%), Postives = 201/288 (69.79%), Query Frame = 1
Query: 145 VNTMAVLSSAADGGTAQKVASLTWSEET----IEVETCGRTYWSFLQRARAIDNKQLGNVSAFTVDDEVDE-------EEVSEDVDFLLRDDLTPELVPELTHYEILGFEKYGNGVGDEGLKKAYRKAVLKYHPDKTGVQ---DGEEDEVFMAVQKAFDTLTDMTKRRAYDSSLEFDDNELEGKEVSGPTSFYKVYEPVFERNKRFAVILPAPSLGDDDTPIDEVNNFYEYWVNFESWRDFSLEG-EHDVEDAHDRYEKRWMIKENDRKSKELKRKEVKRLALLVDRA 963
++ A L + A TA V+ + W+ + + V+ GR YW+F+ R R ID +++ NV+A + + D +E + F LRDDLT + V T+YE+LGF+KYG GV D+GLKKAYRKAVLKYHPDK G +GEEDEVF+ +QKA++TLTD+TK+RAYDSSLEFDD + + F++VY PVF RN+RFAV++PAP LG DD PI+EVN FYEYW NFESWRDF+L+ EH+++DA DRY KRWM KEN ++SK+LK+KE KRL+ LVD A
Sbjct: 9 IDAAAALPAGAPTATAA-VSQIQWTSQPALPPLPVQPAGRAYWAFVNRGRTIDARKIDNVTALATEQDKDGGGSGGKGDEADDAASFQLRDDLTADNVGNFTYYELLGFDKYGTGVTDDGLKKAYRKAVLKYHPDKVGASVADEGEEDEVFILMQKAYETLTDVTKKRAYDSSLEFDDT-IPADDAGKNGDFFEVYGPVFSRNERFAVVVPAPPLGGDDAPIEEVNKFYEYWANFESWRDFTLDSAEHNLDDAEDRYHKRWMEKENAKRSKDLKKKEYKRLSRLVDNA 294
BLAST of mRNA_Ecto-sp13_S_contig1789.5450.1 vs. uniprot
Match: W7TYH1_9STRA (Subfamily c member 2 protein n=3 Tax=Monodopsidaceae TaxID=425072 RepID=W7TYH1_9STRA) HSP 1 Score: 198 bits (504), Expect = 1.290e-52 Identity = 127/278 (45.68%), Postives = 177/278 (63.67%), Query Frame = 1
Query: 205 SLTWSEETI-----EVETCGRTYWSFLQRARAIDNKQLGNVS---AFTVDDEVD-EEEV-------SEDVDFLL-RDDLTPELVPELTHYEILGFEKYG-NGVGDEGLKKAYRKAVLKYHPDKTGVQDGEEDEVFMAVQKAFDTLTDMTKRRAYDSSLEFDDNELEGKEVSGPTSFYKVYEPVFERNKRFAVILPAPSLGDDDTPIDEVNNFYEYWVNFESWRDFSL----EGEHDVEDAHDRYEKRWMIKENDRKSKELKRKEVKRLALLVDRARSS 972
S+T E +I E+ETCG Y+ + + +AI+ + G+ + DE + EEE+ S+D F + LTP+ V ++ +YE+LG VG + LKKAYRKA+L YHPDKTG G+ DEVF+ VQKA++TL+D K+RAYDS + FD++ G+E F+KVY PVF+RN RFAV P P+LG +D+ I++V FY+YW FESWRDFSL E + VE A R EKRWM KEND+ ++ +K++E KRLA LV+RAR++
Sbjct: 38 SVTTEETSIDLPVREIETCGLAYFRYQLKRQAIEAGEAGSGGFDPCKRLRDEAEGEEEIGEGGEGGSDDTTFRFPKKTLTPKDVKKMDYYELLGLGHLSATEVGPDLLKKAYRKALLLYHPDKTG--RGDRDEVFIEVQKAYETLSDGRKKRAYDSEMNFDESIPTGREKG---DFFKVYGPVFDRNARFAVKRPVPNLGREDSKIEDVYRFYDYWGRFESWRDFSLKAAEENDFHVEAAGSREEKRWMQKENDKLARAMKKEEYKRLATLVERARTA 310
BLAST of mRNA_Ecto-sp13_S_contig1789.5450.1 vs. uniprot
Match: F0Y465_AURAN (J domain-containing protein (Fragment) n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0Y465_AURAN) HSP 1 Score: 183 bits (464), Expect = 1.760e-51 Identity = 103/195 (52.82%), Postives = 128/195 (65.64%), Query Frame = 1
Query: 418 HYEILGFEKYGNGVGDEGLKKAYRKAVLKYHPDKTGVQDG------EEDEVFMAVQKAFDTLTDMTKRRAYDSSLEFDDNELEGKEVSGPTS---FYKVYEPVFERNKRFAVILPAPSLGDDDTPIDEVNNFYEYWVNFESWRDFSLEG-EHDVEDAHDRYEKRWMIKENDRKSKELKRKEVKRLALLVDRARSS 972
+Y++LG EK G GV + +K+AY KA+L YHPDK G E D VF+AVQKA+D L+D TKRRAYDS+ FD+ GKE S F+ Y PVF N RFA LPAP LG D +V+ FY YWV FESWRDF LE EHD + A DRYEKRWM KEN++ +K+ KR+E+ R+ LVDRAR++
Sbjct: 8 YYQLLGLEKSGVGVDTDLVKRAYHKALLIYHPDKAGADANGKKKAKEGDAVFLAVQKAYDILSDKTKRRAYDSTNAFDETIPSGKEASEQGEAFDFFATYGPVFASNARFAEKLPAPELGGADALEADVDAFYAYWVRFESWRDFGLEAREHDPDAAEDRYEKRWMAKENEKLAKKRKREEMNRIVSLVDRARAN 202
BLAST of mRNA_Ecto-sp13_S_contig1789.5450.1 vs. uniprot
Match: A0A482SGN3_9ARCH (J domain-containing protein (Fragment) n=1 Tax=archaeon TaxID=1906665 RepID=A0A482SGN3_9ARCH) HSP 1 Score: 179 bits (453), Expect = 1.010e-46 Identity = 102/199 (51.26%), Postives = 137/199 (68.84%), Query Frame = 1
Query: 388 LTPELVPELTHYEILGFE-KYGNGVGDEGLKKAYRKAVLKYHPDKTGVQ--DGEEDE-VFMAVQKAFDTLTDMTKRRAYDSSLEFDDN-----ELEGKEVSGPTSFYKVYEPVFERNKRFAVILPAPSLGDDDTPIDEVNNFYEYWVNFESWRDFSLEG-EHDVEDAHDRYEKRWMIKENDRKSKELKRKEVKRLALLV 954
+TP+ + + YEILGF + G E L+KAY KAVL YHPDK + DG+ED VF+ +Q+AF+ L++ TKRRAYDS L FD++ ++ GP+ F+K++ VF RN RFAV P P LG+ +TP+DEV FYEYWVNFESWRDF+ G EH ++A R EKRWM+KEN+R +K+LK+KE++RL LV
Sbjct: 39 VTPDNLGKYNLYEILGFGGEIGAAADLEALRKAYHKAVLLYHPDKAQFKTADGKEDRTVFLKIQEAFNVLSNETKRRAYDSQLPFDESIPTEERVQKALAKGPSKFFKLFGSVFARNARFAVHKPVPELGNMETPLDEVYKFYEYWVNFESWRDFTGVGAEHKPDEATSREEKRWMMKENERIAKKLKKKEMERLIALV 237
BLAST of mRNA_Ecto-sp13_S_contig1789.5450.1 vs. uniprot
Match: A0A6T5VWA1_9STRA (Hypothetical protein n=1 Tax=Chromulina nebulosa TaxID=96789 RepID=A0A6T5VWA1_9STRA) HSP 1 Score: 178 bits (452), Expect = 2.910e-46 Identity = 144/412 (34.95%), Postives = 213/412 (51.70%), Query Frame = 1
Query: 247 GRTYWSFLQRARAIDNKQLGNVSAFTVDDEVDEEEVSEDVDFLLRDDLTPELVPELTHYEILGFE-KYGNGVGDEGLKKAYRKAVLKYHPDKTGV----QDGEEDE-VFMAVQKAFDTLTDMTKRRAYDSSLEFDDNE-----LEGKEVSGPTSFYKVYEPVFERNKRFAVILPAPSLGDDDTPIDEVNNFYEYWVNFESWRDFS-LEGEHDVEDAHDRYEKRWMIKENDRKSKELKRKEVKRLALLVDRARSSSTSKEYERTEEHEVSDPRRNCEEREKREREQAKIQAVEDEXXXXXXXXXR-----------LRAISRQAKAGREAHKKEMRRRKKVMKNLYS-LAVAQLTVGGSGSEAGVTPVGEEDMEWLKENLLLDQLNAAIAALGTEEDIK------VEGLDVMK 1392
GRT L R I + + N +DD D+ ++ D+TPE + + T+YE+LG + + + ++KAYRKAVL YHPDKT DG ED VF+ +Q+ F+ LT+ KRR YDS L FDD+ L+ K FY + +PVF+RN RFAV P P++GD TPI EV FY+YW+NFESWRDF+ + EH+ ++A R EKRWM KEN+R +K+LK+KE+ R+ LV A+ DPR ++ K+++++A+ QA E E ++ ++ KA RE KK++ + +++ L V +L G G + E +ME L N L+ L + ALG + K V G+D++K
Sbjct: 51 GRTALDLLSGGRKIVD-ETNNNKTNNIDDLADDR-------IVIPTDVTPENLHKYTYYELLGLSNEIVDTIDINDIRKAYRKAVLVYHPDKTKDLNKDADGVEDNAVFLKLQEGFNVLTNEQKRRTYDSQLPFDDSVPTESILDKKMKKDINKFYSILDPVFKRNARFAVKKPVPTIGDASTPISEVAKFYDYWINFESWRDFTGKDSEHNPDEASSREEKRWMQKENERIAKKLKKKEMDRIIDLVMLAQKK---------------DPRVIADKESKKQQKEAEKQAREYELNKKAIDEANAKKEAERIESEMKEFAQATKADREKLKKKLSGARNILRKLLRHTGVLKLGDGAYGI------LSEAEMEILCANADLNDLTSLNEALGGDAATKDTSLFNVNGIDIVK 433
BLAST of mRNA_Ecto-sp13_S_contig1789.5450.1 vs. uniprot
Match: A0A7S3M6I1_9STRA (Hypothetical protein (Fragment) n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3M6I1_9STRA) HSP 1 Score: 171 bits (433), Expect = 6.490e-46 Identity = 98/204 (48.04%), Postives = 135/204 (66.18%), Query Frame = 1
Query: 373 LLRDDLTPELVPELTHYEILGFE-KYGNGVGDEGLKKAYRKAVLKYHPDKTGVQ--DGEEDE-VFMAVQKAFDTLTDMTKRRAYDSSLEFDDN-----ELEGKEVSGPTSFYKVYEPVFERNKRFAVILPAPSLGDDDTPIDEVNNFYEYWVNFESWRDFSLEG-EHDVEDAHDRYEKRWMIKENDRKSKELKRKEVKRLALLV 954
++ + +TP+ + T Y++LGF + G + +K+AY KAVLKYHPDK + DG+ED VF+ +Q+AF L+ TKRRAYDS L FD++ ++ GP F+K++ PVF+RN RFA P P LGD DTP+ +V FYEYWV FESWRDF+ G E+ +DA R EKR+M KEN+R +K+LK KE++RL LV
Sbjct: 75 VIPEGVTPQNLKNFTLYDMLGFAGELGAAADADVIKRAYHKAVLKYHPDKAQYKTADGKEDRTVFLKIQEAFTVLSSETKRRAYDSQLPFDESIPTEDRIQKGLAKGPQKFFKIFAPVFQRNARFAQQKPVPDLGDMDTPLPQVYKFYEYWVKFESWRDFTGVGAEYKPDDAGSREEKRYMQKENERLAKKLKTKEMQRLIELV 278
BLAST of mRNA_Ecto-sp13_S_contig1789.5450.1 vs. uniprot
Match: A0A8K1C4T7_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1C4T7_PYTOL) HSP 1 Score: 175 bits (444), Expect = 7.320e-46 Identity = 108/263 (41.06%), Postives = 158/263 (60.08%), Query Frame = 1
Query: 223 ETIEVETCGRTYWSFLQRARAIDNKQLGNVSAFTVDDEVDEEEVSEDVDFLL---RDDLTPELVPELTHYEILGFEKYGNGVGDEGLKKAYRKAVLKYHPDKTGVQDGEEDEVFMAVQKAFDTLTDMTKRRAYDSSLEFDD-----------NELEGKEVSGPTSFYKVYEPVFERNKRFAVILPAPSLGDDDTPIDEVNNFYEYWVNFESWRDFSLEGEHDVEDAHDRYEKRWMIKENDRKSKELKRKEVKRLALLVDRARS 969
+T E CGR +F +RA+ + + + + +DE+ E V + + +L R + + ELT Y+ LG G V ++ +KKAY + ++++HPDKTG E D ++AVQKAF+TLTD K+RAYDS +FD+ NE +GK FY++Y PVF+ N RF+ P P LGDD TPI+ V +FY++W+ FESWRDFS EHDV+ A R +KRWM K+N+ +K+ K+ E +RL LVDRA++
Sbjct: 52 KTKRFEACGR---AFHRRAKNVARGRSASCESID-EDEIKRESVRKQEEAILKKYRKSIRGKNFLELTMYQQLGLADIGFDVTEDQIKKAYHRVLIEHHPDKTGKT--ENDPNYLAVQKAFETLTDPQKKRAYDSQCDFDEWIPTGAEKIAQNEKDGK----GKDFYELYGPVFKANARFSEKTPVPELGDDSTPIETVYDFYDFWLKFESWRDFSHGLEHDVDSAEHRDQKRWMAKKNEVVAKKKKKDEYRRLTNLVDRAQA 304
BLAST of mRNA_Ecto-sp13_S_contig1789.5450.1 vs. uniprot
Match: A0A024TU57_9STRA (J domain-containing protein n=12 Tax=Aphanomyces TaxID=100860 RepID=A0A024TU57_9STRA) HSP 1 Score: 173 bits (438), Expect = 3.310e-45 Identity = 93/194 (47.94%), Postives = 130/194 (67.01%), Query Frame = 1
Query: 409 ELTHYEILGFEKYGNGVGDEGLKKAYRKAVLKYHPDKTGVQDGEEDEVFMAVQKAFDTLTDMTKRRAYDSSLEFDD------NELEGKEVSGPTSFYKVYEPVFERNKRFAVILPAPSLGDDDTPIDEVNNFYEYWVNFESWRDFSLEGEHDVEDAHDRYEKRWMIKENDRKSKELKRKEVKRLALLVDRARSS 972
+LT Y+ LG E +KKAY + ++++HPDKT ++D E D ++AVQKAF+TL D K+RAYDS EFDD +++ + G FY +Y PVFERN RF+ I P P LGDD TP+D+V FY +W F+SWRDF+ EHDV+ A R EKR+++K+N+ +K+LK+KE RLA LVDRA+++
Sbjct: 86 QLTMYQQLGLTDVMFDATPEQIKKAYHRVLIEHHPDKT-LKD-ENDPNYLAVQKAFNTLMDPQKKRAYDSQCEFDDWIPLGTEKIKQDDGKGTVDFYALYGPVFERNARFSEIKPVPLLGDDSTPLDDVTAFYNFWFKFDSWRDFTHNAEHDVDSAEHRDEKRFLMKKNEAAAKKLKKKEYARLATLVDRAQAN 277
BLAST of mRNA_Ecto-sp13_S_contig1789.5450.1 vs. uniprot
Match: A0A3R7MV45_9STRA (J domain-containing protein n=3 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3R7MV45_9STRA) HSP 1 Score: 173 bits (439), Expect = 3.960e-45 Identity = 95/192 (49.48%), Postives = 125/192 (65.10%), Query Frame = 1
Query: 409 ELTHYEILGFEKYGNGVGDEGLKKAYRKAVLKYHPDKTGVQDGEEDEVFMAVQKAFDTLTDMTKRRAYDSSLEFDD------NELEGKEVSGP-TSFYKVYEPVFERNKRFAVILPAPSLGDDDTPIDEVNNFYEYWVNFESWRDFSLEGEHDVEDAHDRYEKRWMIKENDRKSKELKRKEVKRLALLVDRA 963
+LT Y+ LG G V D+ +KKAY + ++++HPDKTG E D ++AVQKAF TL D K+RAYDS +FDD +++ E SG SFY +Y+PVF+ N RF+ P P LG DD PIDEV FY++W F+SWRDF+ + EHDV+ A R KRWM K+N+ K+ K+KE RLA LVDRA
Sbjct: 115 DLTMYQQLGVSDIGFDVTDDQVKKAYHRVLIEHHPDKTGKT--ENDPNYLAVQKAFATLMDPQKKRAYDSQCDFDDWIPTGSEKIKENETSGEGKSFYDLYDPVFKANARFSENKPVPQLGGDDLPIDEVYAFYDFWNKFDSWRDFTHDSEHDVDSAEHRDHKRWMAKKNEAAGKKKKKKEYARLASLVDRA 304 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig1789.5450.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig1789.5450.1 >prot_Ecto-sp13_S_contig1789.5450.1 ID=prot_Ecto-sp13_S_contig1789.5450.1|Name=mRNA_Ecto-sp13_S_contig1789.5450.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=493bp MPPPYPPFSELFLSPSRGLGLLLAFGSECGCRREVERTSFHHLLKKIGVNback to top mRNA from alignment at Ecto-sp13_S_contig1789:6029..11894- Legend: polypeptideCDSUTR Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig1789.5450.1 ID=mRNA_Ecto-sp13_S_contig1789.5450.1|Name=mRNA_Ecto-sp13_S_contig1789.5450.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=5866bp|location=Sequence derived from alignment at Ecto-sp13_S_contig1789:6029..11894- (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig1789:6029..11894- >mRNA_Ecto-sp13_S_contig1789.5450.1 ID=mRNA_Ecto-sp13_S_contig1789.5450.1|Name=mRNA_Ecto-sp13_S_contig1789.5450.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=1479bp|location=Sequence derived from alignment at Ecto-sp13_S_contig1789:6029..11894- (Ectocarpus species13 EcNAP12_S_4_19m)back to top |