prot_Ecto-sp13_S_contig1789.5448.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig1789.5448.1
Unique Nameprot_Ecto-sp13_S_contig1789.5448.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length305
Homology
BLAST of mRNA_Ecto-sp13_S_contig1789.5448.1 vs. uniprot
Match: D7FN51_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FN51_ECTSI)

HSP 1 Score: 544 bits (1402), Expect = 1.070e-190
Identity = 287/304 (94.41%), Postives = 290/304 (95.39%), Query Frame = 0
Query:    1 VQNNQLWVPDSVAAGCMVCSRPFNLVLRRHHCRRCGTCMCGFCSHTAVSDKVLSVNQTTGAVIRLSSGEPVRCCTPCTRVLDQQLAHALQRKGWGARHGTPAAIDAIRQRFPGPSSSSTPFVAAGGAGYAATLPILSAAAKEGYDGGGFVPPLSTSRSNAEEEEYEGQXXXXXXXXXXXNGYYHGGGDGRGNDSESPIRRMKHGVEDPLASVQEHSPPPPPRRWQEPQPTAGEVPSWLGKSSLGSSRLPAATPKSAVTASAGRAPLPDAEQYYEEGLEEEGGVWGEESAGMEETTDWSNSGAVV 304
            VQNNQLWVPDSVAAGCMVCSRPFNLVLRRHHCRRCGTCMCGFCSHTAVSDKVLSVNQTTGAVIRLSSGEPVRCCTPCTRVLDQQLAHALQRKGWGARHGTPAAI+AIR+RFPGPSSSSTPFVAAGGAGYAATLPILSAAA EGYDGGGFVPP STSR NAEE      XXXXXXXXXXX   YHGGGDGRG DSESP+RRMKHGVEDPLASVQEHSPPPPPRRWQEPQPTAGEVPSWLGKSSLGSSRLPAATPKSAVT SAGRAPLPDAEQYYEEGLEEEGGVWGEESAGMEETTDWSNSGAVV
Sbjct:  255 VQNNQLWVPDSVAAGCMVCSRPFNLVLRRHHCRRCGTCMCGFCSHTAVSDKVLSVNQTTGAVIRLSSGEPVRCCTPCTRVLDQQLAHALQRKGWGARHGTPAAINAIRKRFPGPSSSSTPFVAAGGAGYAATLPILSAAATEGYDGGGFVPPPSTSRPNAEEXXXXXXXXXXXXXXXXXXXXYHGGGDGRGYDSESPVRRMKHGVEDPLASVQEHSPPPPPRRWQEPQPTAGEVPSWLGKSSLGSSRLPAATPKSAVTTSAGRAPLPDAEQYYEEGLEEEGGVWGEESAGMEETTDWSNSGAVV 558          
BLAST of mRNA_Ecto-sp13_S_contig1789.5448.1 vs. uniprot
Match: A0A835YKQ1_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YKQ1_9STRA)

HSP 1 Score: 108 bits (269), Expect = 1.060e-22
Identity = 53/99 (53.54%), Postives = 66/99 (66.67%), Query Frame = 0
Query:    5 QLWVPDSVAAGCMVCSRPFNLVLRRHHCRRCGTCMCGFCSHTAVSDKVLSVNQTTGAVIRLSSGEPVRCCTPCTRVLDQQLAHALQRK-GWGARHGTPA 102
            ++ VPD  A  CMVCS  FN+V RRHHCRRCG C+CG CS   VSDKV+  + + G V  +   EPVR CT CTRV+D+ LA AL ++ G G +HG  A
Sbjct:  356 EMRVPDRTALACMVCSAMFNIVRRRHHCRRCGACVCGACSAVKVSDKVMVQDFSGGPVRYVKETEPVRTCTRCTRVVDEALARALSKRVGGGRKHGPGA 454          
BLAST of mRNA_Ecto-sp13_S_contig1789.5448.1 vs. uniprot
Match: A0A7S2XYB4_9STRA (Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2XYB4_9STRA)

HSP 1 Score: 87.4 bits (215), Expect = 8.340e-18
Identity = 42/102 (41.18%), Postives = 59/102 (57.84%), Query Frame = 0
Query:    1 VQNNQLWVPDSVAAGCMVCSRPFNLVLRRHHCRRCGTCMCGFCSHTAVSDKVLSVNQTTGAVIRL-------------SSGEPVRCCTPCTRVLDQQLAHAL 89
            V+  Q WVPDSVA  CMVC   F ++ RRHHCRRCG C+CG+CS   +++KVL  +     +I L             +S   VR C  CT ++D+++A +L
Sbjct:   21 VKRRQEWVPDSVAPCCMVCGSVFGMLRRRHHCRRCGACVCGYCSSATITEKVLRTDPRNDEIISLMTVAGPTPDGGAAASEALVRVCAKCTVLIDRRIATSL 122          
BLAST of mRNA_Ecto-sp13_S_contig1789.5448.1 vs. uniprot
Match: A0A1D2MG42_ORCCI (Pleckstrin y domain-containing family F member 2 n=1 Tax=Orchesella cincta TaxID=48709 RepID=A0A1D2MG42_ORCCI)

HSP 1 Score: 73.2 bits (178), Expect = 2.310e-11
Identity = 43/119 (36.13%), Postives = 57/119 (47.90%), Query Frame = 0
Query:    2 QNNQLWVPDSVAAGCMVCSRPFNLVLRRHHCRRCGTCMCGFCSHTAVSDKVLSVNQTTGAVIRLSSGEPVRCCTPCTRVLDQQLAHALQRKGWGARHGTPAAIDAIRQRFPGPSSSSTP 120
            Q+  +WVPDS AA C VC  PF  V RRHHCR+CG+ +CG CS     ++ L  NQ         S +P+R C PC   +  +     Q   W     +    D+  +    PS SS P
Sbjct:  144 QHAAVWVPDSEAAACQVCRNPFTFVNRRHHCRKCGSVICGPCS----KNRALLPNQ---------SKKPLRVCNPCHNSVSGKNQDGNQNS-WAGNADSSGEDDSDDEGEENPSWSSAP 248          
BLAST of mRNA_Ecto-sp13_S_contig1789.5448.1 vs. uniprot
Match: A0A7S3XR58_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XR58_HETAK)

HSP 1 Score: 69.7 bits (169), Expect = 1.100e-9
Identity = 29/49 (59.18%), Postives = 33/49 (67.35%), Query Frame = 0
Query:    5 QLWVPDSVAAGCMVCSRPFNLVLRRHHCRRCGTCMCGFCSHTAVSDKVL 53
            + WVPDSVA  CMVC   F L  RRHHCRRCG C+C  CS + V+D  L
Sbjct:  380 EAWVPDSVAPACMVCGAAFGLFTRRHHCRRCGACVCAGCSASRVTDPAL 428          
BLAST of mRNA_Ecto-sp13_S_contig1789.5448.1 vs. uniprot
Match: A0A418B4W1_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A418B4W1_9STRA)

HSP 1 Score: 68.9 bits (167), Expect = 2.410e-9
Identity = 34/84 (40.48%), Postives = 44/84 (52.38%), Query Frame = 0
Query:    6 LWVPDSVAAGCMVCSRPFNLVLRRHHCRRCGTCMCGFCSHTAVSDKVLSVNQTTGAVIRLSSGEPVRCCTPCTRVLDQQLAHAL 89
            +W+PDSV+  C  C + F L+LRRHHCRRCG  +CG CS                +++  +   PVR C  C RVLD     AL
Sbjct:  350 VWIPDSVSEECSQCRKAFRLLLRRHHCRRCGFVVCGLCSEHR-------------SILFDNDMRPVRVCNKCNRVLDLVKQSAL 420          
BLAST of mRNA_Ecto-sp13_S_contig1789.5448.1 vs. uniprot
Match: A0A024UQR4_9STRA (Uncharacterized protein n=2 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024UQR4_9STRA)

HSP 1 Score: 68.9 bits (167), Expect = 3.000e-9
Identity = 34/84 (40.48%), Postives = 44/84 (52.38%), Query Frame = 0
Query:    6 LWVPDSVAAGCMVCSRPFNLVLRRHHCRRCGTCMCGFCSHTAVSDKVLSVNQTTGAVIRLSSGEPVRCCTPCTRVLDQQLAHAL 89
            +W+PDSV+  C  C + F L+LRRHHCRRCG  +CG CS                +++  +   PVR C  C RVLD     AL
Sbjct:  422 VWIPDSVSEECSQCRKAFRLLLRRHHCRRCGFVVCGLCSEHR-------------SILFDNDMRPVRVCNKCNRVLDLVKQSAL 492          
BLAST of mRNA_Ecto-sp13_S_contig1789.5448.1 vs. uniprot
Match: A0A7S0MGZ5_9CRYP (Hypothetical protein (Fragment) n=1 Tax=Cryptomonas curvata TaxID=233186 RepID=A0A7S0MGZ5_9CRYP)

HSP 1 Score: 66.2 bits (160), Expect = 3.520e-9
Identity = 46/152 (30.26%), Postives = 68/152 (44.74%), Query Frame = 0
Query:    7 WVPDSVAAGCMVCSRPFNLVLRRHHCRRCGTCMCGFCSHTAVSDKVLSVNQTTGAVIRLSSGEPVRCCTPCTRVLDQ--QLAHALQRKGWGARHGTPAAIDAIRQRFPGPSSSS---TPFVAAGGAGYAATLPILSAAAKEGYDGGGFVPPL 153
            W PD     C  CS+ FN++ RRHHCR CG  +CG C            N+   ++++    EPVR C  C     Q  +L  A+   G+        A++A+      P+ S+   TPF+ A   G+   + +L    + G D    VPPL
Sbjct:    9 WQPDKSTKTCSTCSKRFNVLQRRHHCRHCGRVICGSCGK----------NKHRVSLLKFGYHEPVRVCVSCHERCTQAEELMAAISGNGF-------VALEALLDAGADPNFSTLVFTPFMHAAAKGHTKLMQLLG---ERGADTAYHVPPL 140          
BLAST of mRNA_Ecto-sp13_S_contig1789.5448.1 vs. uniprot
Match: A0A3R7B1W5_9STRA (FYVE-type domain-containing protein (Fragment) n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A3R7B1W5_9STRA)

HSP 1 Score: 68.2 bits (165), Expect = 4.100e-9
Identity = 34/84 (40.48%), Postives = 44/84 (52.38%), Query Frame = 0
Query:    6 LWVPDSVAAGCMVCSRPFNLVLRRHHCRRCGTCMCGFCSHTAVSDKVLSVNQTTGAVIRLSSGEPVRCCTPCTRVLDQQLAHAL 89
            +W+PDSVA  C  C +PF L+ RRHHCRRCG  +CG CS                +++  +   PVR CT C  VL +    AL
Sbjct:  460 VWIPDSVAEECSQCGKPFRLLWRRHHCRRCGFVVCGHCSEHR-------------SILFDNDPRPVRVCTTCHNVLTKVKECAL 530          
BLAST of mRNA_Ecto-sp13_S_contig1789.5448.1 vs. uniprot
Match: A0A6A5ASZ2_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A6A5ASZ2_9STRA)

HSP 1 Score: 68.2 bits (165), Expect = 4.260e-9
Identity = 34/84 (40.48%), Postives = 44/84 (52.38%), Query Frame = 0
Query:    6 LWVPDSVAAGCMVCSRPFNLVLRRHHCRRCGTCMCGFCSHTAVSDKVLSVNQTTGAVIRLSSGEPVRCCTPCTRVLDQQLAHAL 89
            +W+PDSVA  C  C +PF L+ RRHHCRRCG  +CG CS                +++  +   PVR CT C  VL +    AL
Sbjct:  424 VWIPDSVAEECSQCGKPFRLLWRRHHCRRCGFVVCGHCSEHR-------------SILFDNDPRPVRVCTTCHNVLTKVKECAL 494          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig1789.5448.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FN51_ECTSI1.070e-19094.41Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A835YKQ1_9STRA1.060e-2253.54Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A7S2XYB4_9STRA8.340e-1841.18Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa... [more]
A0A1D2MG42_ORCCI2.310e-1136.13Pleckstrin y domain-containing family F member 2 n... [more]
A0A7S3XR58_HETAK1.100e-959.18Hypothetical protein (Fragment) n=1 Tax=Heterosigm... [more]
A0A418B4W1_9STRA2.410e-940.48Uncharacterized protein n=1 Tax=Aphanomyces invada... [more]
A0A024UQR4_9STRA3.000e-940.48Uncharacterized protein n=2 Tax=Aphanomyces invada... [more]
A0A7S0MGZ5_9CRYP3.520e-930.26Hypothetical protein (Fragment) n=1 Tax=Cryptomona... [more]
A0A3R7B1W5_9STRA4.100e-940.48FYVE-type domain-containing protein (Fragment) n=1... [more]
A0A6A5ASZ2_9STRA4.260e-940.48Uncharacterized protein (Fragment) n=1 Tax=Aphanom... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000306FYVE zinc fingerSMARTSM00064fyve_4coord: 2..83
e-value: 2.0E-12
score: 57.2
IPR000306FYVE zinc fingerPFAMPF01363FYVEcoord: 7..81
e-value: 2.8E-15
score: 56.2
IPR013083Zinc finger, RING/FYVE/PHD-typeGENE3D3.30.40.10coord: 1..94
e-value: 3.0E-17
score: 64.1
NoneNo IPR availablePANTHERPTHR23164:SF6PLECKSTRIN HOMOLOGY DOMAIN-CONTAINING FAMILY F MEMBER 2coord: 4..80
NoneNo IPR availablePANTHERPTHR23164EARLY ENDOSOME ANTIGEN 1coord: 4..80
IPR017455Zinc finger, FYVE-relatedPROSITEPS50178ZF_FYVEcoord: 10..82
score: 11.374
IPR011011Zinc finger, FYVE/PHD-typeSUPERFAMILY57903FYVE/PHD zinc fingercoord: 6..86

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig1789contigEcto-sp13_S_contig1789:11..2109 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig1789.5448.1mRNA_Ecto-sp13_S_contig1789.5448.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig1789 11..2109 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig1789.5448.1 ID=prot_Ecto-sp13_S_contig1789.5448.1|Name=mRNA_Ecto-sp13_S_contig1789.5448.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=305bp
VQNNQLWVPDSVAAGCMVCSRPFNLVLRRHHCRRCGTCMCGFCSHTAVSD
KVLSVNQTTGAVIRLSSGEPVRCCTPCTRVLDQQLAHALQRKGWGARHGT
PAAIDAIRQRFPGPSSSSTPFVAAGGAGYAATLPILSAAAKEGYDGGGFV
PPLSTSRSNAEEEEYEGQEKQEGMGGLGGNGYYHGGGDGRGNDSESPIRR
MKHGVEDPLASVQEHSPPPPPRRWQEPQPTAGEVPSWLGKSSLGSSRLPA
ATPKSAVTASAGRAPLPDAEQYYEEGLEEEGGVWGEESAGMEETTDWSNS
GAVV*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000306Znf_FYVE
IPR013083Znf_RING/FYVE/PHD
IPR017455Znf_FYVE-rel
IPR011011Znf_FYVE_PHD