prot_Ecto-sp13_S_contig17887.5447.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig17887.5447.1
Unique Nameprot_Ecto-sp13_S_contig17887.5447.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length86
Homology
BLAST of mRNA_Ecto-sp13_S_contig17887.5447.1 vs. uniprot
Match: E6ZES5_ECTSI (NADH dehydrogenase subunit 2 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=E6ZES5_ECTSI)

HSP 1 Score: 124 bits (311), Expect = 1.160e-31
Identity = 69/78 (88.46%), Postives = 71/78 (91.03%), Query Frame = 0
Query:    9 TCAKFIIFIGLIFCVSVSESYMFSARFRAYEFFAFILGIALSVCLFISSYDFLSIYLSMEFLSLIFYVLDNKKKNSYF 86
            T AKFIIFIGL+FCVSVSESYMFSARFRAYEFF FILGIALS+CL ISSYD LSIYLSMEFLSLIFYVL   KKNSYF
Sbjct:   86 TWAKFIIFIGLLFCVSVSESYMFSARFRAYEFFVFILGIALSLCLLISSYDLLSIYLSMEFLSLIFYVLAAWKKNSYF 163          
BLAST of mRNA_Ecto-sp13_S_contig17887.5447.1 vs. uniprot
Match: A0A089N305_PETFA (NADH dehydrogenase subunit 2 n=6 Tax=Ectocarpales TaxID=2877 RepID=A0A089N305_PETFA)

HSP 1 Score: 120 bits (300), Expect = 4.240e-30
Identity = 66/81 (81.48%), Postives = 70/81 (86.42%), Query Frame = 0
Query:    6 YSRTCAKFIIFIGLIFCVSVSESYMFSARFRAYEFFAFILGIALSVCLFISSYDFLSIYLSMEFLSLIFYVLDNKKKNSYF 86
            Y  T AKFII +GL+FCVS+SE YMFSARFRAYEFF FILGIALS+CL ISSYD LSIYLSMEFLSLIFYVL   KKNSYF
Sbjct:   83 YLSTWAKFIILVGLLFCVSISEVYMFSARFRAYEFFVFILGIALSLCLLISSYDLLSIYLSMEFLSLIFYVLACWKKNSYF 163          
BLAST of mRNA_Ecto-sp13_S_contig17887.5447.1 vs. uniprot
Match: Q94Z01_PYLLI (NADH dehydrogenase subunit 2 n=1 Tax=Pylaiella littoralis TaxID=2885 RepID=Q94Z01_PYLLI)

HSP 1 Score: 118 bits (296), Expect = 1.560e-29
Identity = 65/81 (80.25%), Postives = 70/81 (86.42%), Query Frame = 0
Query:    6 YSRTCAKFIIFIGLIFCVSVSESYMFSARFRAYEFFAFILGIALSVCLFISSYDFLSIYLSMEFLSLIFYVLDNKKKNSYF 86
            Y  T AK IIF+GL+FCVSVSE+YMFSARFR+YEFF FILGI LS+CL ISSYD LSIYLSMEFLSLIFYVL   KKNSYF
Sbjct:   83 YLGTWAKSIIFLGLLFCVSVSEAYMFSARFRSYEFFVFILGIGLSLCLLISSYDLLSIYLSMEFLSLIFYVLATWKKNSYF 163          
BLAST of mRNA_Ecto-sp13_S_contig17887.5447.1 vs. uniprot
Match: A0A1I9LW35_9PHAE (NADH dehydrogenase subunit 2 n=2 Tax=Pleurocladia lacustris TaxID=246121 RepID=A0A1I9LW35_9PHAE)

HSP 1 Score: 117 bits (293), Expect = 4.160e-29
Identity = 64/81 (79.01%), Postives = 69/81 (85.19%), Query Frame = 0
Query:    6 YSRTCAKFIIFIGLIFCVSVSESYMFSARFRAYEFFAFILGIALSVCLFISSYDFLSIYLSMEFLSLIFYVLDNKKKNSYF 86
            Y    AKFI+F+GL+FCVSVSESYMF ARFRAYEFF FILGI LS+CL ISSYD LSIYLSMEFLSLIFYVL   KK+SYF
Sbjct:   83 YLSNWAKFIVFVGLLFCVSVSESYMFLARFRAYEFFVFILGIGLSLCLLISSYDLLSIYLSMEFLSLIFYVLAAWKKDSYF 163          
BLAST of mRNA_Ecto-sp13_S_contig17887.5447.1 vs. uniprot
Match: Q2TUE9_9PHAE (NADH dehydrogenase subunit 2 n=2 Tax=Desmarestia TaxID=31339 RepID=Q2TUE9_9PHAE)

HSP 1 Score: 116 bits (291), Expect = 8.090e-29
Identity = 61/76 (80.26%), Postives = 69/76 (90.79%), Query Frame = 0
Query:   11 AKFIIFIGLIFCVSVSESYMFSARFRAYEFFAFILGIALSVCLFISSYDFLSIYLSMEFLSLIFYVLDNKKKNSYF 86
            AKFI+F+GL+FCVSVSE+YMFSARFRAYE + FI+GI LS+CL ISSYD LSIYLSMEFLSLIFYVL + KKNSYF
Sbjct:   88 AKFIVFLGLLFCVSVSEAYMFSARFRAYEIYVFIIGIGLSLCLLISSYDLLSIYLSMEFLSLIFYVLASWKKNSYF 163          
BLAST of mRNA_Ecto-sp13_S_contig17887.5447.1 vs. uniprot
Match: F8UWM7_9PHAE (NADH dehydrogenase subunit 2 n=61 Tax=Laminariales TaxID=2886 RepID=F8UWM7_9PHAE)

HSP 1 Score: 115 bits (289), Expect = 1.550e-28
Identity = 62/78 (79.49%), Postives = 69/78 (88.46%), Query Frame = 0
Query:    9 TCAKFIIFIGLIFCVSVSESYMFSARFRAYEFFAFILGIALSVCLFISSYDFLSIYLSMEFLSLIFYVLDNKKKNSYF 86
            T +K I+F+GLIFCV+VSESYMFSARFRAYEFF F++GI LS+CL ISSYD LSIYLSMEFLSLIFYVL   KKNSYF
Sbjct:   86 TWSKAIVFLGLIFCVAVSESYMFSARFRAYEFFVFVIGIGLSLCLLISSYDLLSIYLSMEFLSLIFYVLAAWKKNSYF 163          
BLAST of mRNA_Ecto-sp13_S_contig17887.5447.1 vs. uniprot
Match: A0A8F0FC15_9PHAE (NADH dehydrogenase subunit 2 n=1 Tax=Chorda asiatica TaxID=1281577 RepID=A0A8F0FC15_9PHAE)

HSP 1 Score: 115 bits (287), Expect = 2.990e-28
Identity = 63/81 (77.78%), Postives = 68/81 (83.95%), Query Frame = 0
Query:    6 YSRTCAKFIIFIGLIFCVSVSESYMFSARFRAYEFFAFILGIALSVCLFISSYDFLSIYLSMEFLSLIFYVLDNKKKNSYF 86
            Y  T AKFI+F+GL+F VSV E YMFSARFRAYEFF FI+GI LS+CL ISSYD LSIYLSMEFLSLIFYVL   KKNSYF
Sbjct:   83 YVGTWAKFIVFLGLLFSVSVCEPYMFSARFRAYEFFVFIIGIGLSLCLLISSYDLLSIYLSMEFLSLIFYVLATWKKNSYF 163          
BLAST of mRNA_Ecto-sp13_S_contig17887.5447.1 vs. uniprot
Match: A0A3G5FPS0_9PHAE (NADH dehydrogenase subunit 2 n=1 Tax=Cladosiphon okamuranus TaxID=309737 RepID=A0A3G5FPS0_9PHAE)

HSP 1 Score: 114 bits (286), Expect = 4.050e-28
Identity = 63/81 (77.78%), Postives = 70/81 (86.42%), Query Frame = 0
Query:    6 YSRTCAKFIIFIGLIFCVSVSESYMFSARFRAYEFFAFILGIALSVCLFISSYDFLSIYLSMEFLSLIFYVLDNKKKNSYF 86
            Y  + AK I+ +GLIFCVSVSE+YMFSARFRAYE F FILGIALS+CL ISSYD LSIYLSMEF+SLIFYVL + KKNSYF
Sbjct:   83 YIGSWAKSIVVLGLIFCVSVSEAYMFSARFRAYELFVFILGIALSLCLLISSYDLLSIYLSMEFISLIFYVLASWKKNSYF 163          
BLAST of mRNA_Ecto-sp13_S_contig17887.5447.1 vs. uniprot
Match: A0A8F0K0C6_9PHAE (NADH dehydrogenase subunit 2 n=2 Tax=Ecklonia TaxID=105406 RepID=A0A8F0K0C6_9PHAE)

HSP 1 Score: 112 bits (281), Expect = 2.080e-27
Identity = 60/78 (76.92%), Postives = 68/78 (87.18%), Query Frame = 0
Query:    9 TCAKFIIFIGLIFCVSVSESYMFSARFRAYEFFAFILGIALSVCLFISSYDFLSIYLSMEFLSLIFYVLDNKKKNSYF 86
            T +K I+ +GL+FCVSVS+SYMFSARFRAYEFF FI+GI LS+CL ISSYD LSIYL+MEFLSLIFYVL   KKNSYF
Sbjct:   86 TWSKLIVLLGLLFCVSVSQSYMFSARFRAYEFFVFIIGIGLSLCLLISSYDLLSIYLNMEFLSLIFYVLAAWKKNSYF 163          
BLAST of mRNA_Ecto-sp13_S_contig17887.5447.1 vs. uniprot
Match: A0A8F0K0T6_9PHAE (NADH dehydrogenase subunit 2 n=1 Tax=Analipus japonicus TaxID=31333 RepID=A0A8F0K0T6_9PHAE)

HSP 1 Score: 111 bits (277), Expect = 7.630e-27
Identity = 60/81 (74.07%), Postives = 67/81 (82.72%), Query Frame = 0
Query:    6 YSRTCAKFIIFIGLIFCVSVSESYMFSARFRAYEFFAFILGIALSVCLFISSYDFLSIYLSMEFLSLIFYVLDNKKKNSYF 86
            Y  T AKFII +GLIFCVS+ E+YMFS RFRA+EFF F++ I LS+CL ISSYD LSIYLSMEFLSLIFYVL   KKNSYF
Sbjct:   83 YLSTWAKFIILLGLIFCVSICEAYMFSVRFRAFEFFVFLISIGLSLCLLISSYDLLSIYLSMEFLSLIFYVLACWKKNSYF 163          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig17887.5447.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
E6ZES5_ECTSI1.160e-3188.46NADH dehydrogenase subunit 2 n=1 Tax=Ectocarpus si... [more]
A0A089N305_PETFA4.240e-3081.48NADH dehydrogenase subunit 2 n=6 Tax=Ectocarpales ... [more]
Q94Z01_PYLLI1.560e-2980.25NADH dehydrogenase subunit 2 n=1 Tax=Pylaiella lit... [more]
A0A1I9LW35_9PHAE4.160e-2979.01NADH dehydrogenase subunit 2 n=2 Tax=Pleurocladia ... [more]
Q2TUE9_9PHAE8.090e-2980.26NADH dehydrogenase subunit 2 n=2 Tax=Desmarestia T... [more]
F8UWM7_9PHAE1.550e-2879.49NADH dehydrogenase subunit 2 n=61 Tax=Laminariales... [more]
A0A8F0FC15_9PHAE2.990e-2877.78NADH dehydrogenase subunit 2 n=1 Tax=Chorda asiati... [more]
A0A3G5FPS0_9PHAE4.050e-2877.78NADH dehydrogenase subunit 2 n=1 Tax=Cladosiphon o... [more]
A0A8F0K0C6_9PHAE2.080e-2776.92NADH dehydrogenase subunit 2 n=2 Tax=Ecklonia TaxI... [more]
A0A8F0K0T6_9PHAE7.630e-2774.07NADH dehydrogenase subunit 2 n=1 Tax=Analipus japo... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 78..86
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 61..77
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 56..60
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 37..55
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..5
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 26..36
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 6..25
NoneNo IPR availableTMHMMTMhelixcoord: 13..35
NoneNo IPR availableTMHMMTMhelixcoord: 40..58
NoneNo IPR availableTMHMMTMhelixcoord: 60..77

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig17887contigEcto-sp13_S_contig17887:3..260 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig17887.5447.1mRNA_Ecto-sp13_S_contig17887.5447.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig17887 3..428 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig17887.5447.1 ID=prot_Ecto-sp13_S_contig17887.5447.1|Name=mRNA_Ecto-sp13_S_contig17887.5447.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=86bp
MECYFYSRTCAKFIIFIGLIFCVSVSESYMFSARFRAYEFFAFILGIALS
VCLFISSYDFLSIYLSMEFLSLIFYVLDNKKKNSYF
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