mRNA_Ecto-sp13_S_contig17882.5446.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig17882.5446.1 vs. uniprot
Match: D7FQ72_ECTSI (AAA domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FQ72_ECTSI) HSP 1 Score: 427 bits (1097), Expect = 1.130e-144 Identity = 208/225 (92.44%), Postives = 217/225 (96.44%), Query Frame = 1
Query: 1 IYSLQTKDVEKLPETEASSKSSSRGAPPTIIDYTFRCAGPEGHEKVKNFITNAYAWYTKEMESTEDNARYMYSLVAAKEPPKKKGASARYPDGMADAEGHPKKKEESSPIIYKRYMLGDVKDFDSLFFPEKEKLLRALENFQAKRGRYAIRGYPHKLGFLLHGPPGTGKTSLIKALACRTGRHIIQVPLGRVKTNEDLMNIMFDQSFRVATQELPVPLKHENVIY 675
++ QTKDVEKLPETEASSKS SRG PPTI+DYTFRCAGPEG+EKVKNFIT+AYAWYTKEMESTEDNARYMYSLVAAKEPPKKKGASARYPDGM D EGHP KKE+SSPIIYKRY LGDVKDFDSLFFPEKE+LLRALENF+AKRGRYAIRGYPHKLGFLLHGPPGTGKTSLIKALACRTGRHIIQVPLGR+KTNEDLMNIMFDQSFRVATQELPVPLKHENVIY
Sbjct: 150 VWFKQTKDVEKLPETEASSKSYSRGPPPTIVDYTFRCAGPEGNEKVKNFITDAYAWYTKEMESTEDNARYMYSLVAAKEPPKKKGASARYPDGMEDEEGHPVKKEDSSPIIYKRYKLGDVKDFDSLFFPEKEQLLRALENFEAKRGRYAIRGYPHKLGFLLHGPPGTGKTSLIKALACRTGRHIIQVPLGRIKTNEDLMNIMFDQSFRVATQELPVPLKHENVIY 374
BLAST of mRNA_Ecto-sp13_S_contig17882.5446.1 vs. uniprot
Match: D7FQ71_ECTSI (AAA domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FQ71_ECTSI) HSP 1 Score: 300 bits (767), Expect = 8.650e-98 Identity = 145/155 (93.55%), Postives = 151/155 (97.42%), Query Frame = 1
Query: 211 MYSLVAAKEPPKKKGASARYPDGMADAEGHPKKKEESSPIIYKRYMLGDVKDFDSLFFPEKEKLLRALENFQAKRGRYAIRGYPHKLGFLLHGPPGTGKTSLIKALACRTGRHIIQVPLGRVKTNEDLMNIMFDQSFRVATQELPVPLKHENVIY 675
MYSLVAAKEPPKKKGASARYPDGM + EGHP KKE+SSPIIYKRY LGDVKDFDSLFFPEKE+LLRALENF+AKRGRYAIRGYPHKLGFLLHGPPGTGKTSLIKALACRTGRHIIQVPLGR+KTNEDLMN+MFDQSFRVATQELPVPLKHENVIY
Sbjct: 8 MYSLVAAKEPPKKKGASARYPDGMVNVEGHPVKKEDSSPIIYKRYKLGDVKDFDSLFFPEKEQLLRALENFEAKRGRYAIRGYPHKLGFLLHGPPGTGKTSLIKALACRTGRHIIQVPLGRIKTNEDLMNVMFDQSFRVATQELPVPLKHENVIY 162
BLAST of mRNA_Ecto-sp13_S_contig17882.5446.1 vs. uniprot
Match: A0A6H5K8D9_9PHAE (AAA domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5K8D9_9PHAE) HSP 1 Score: 268 bits (686), Expect = 3.260e-81 Identity = 136/198 (68.69%), Postives = 156/198 (78.79%), Query Frame = 1
Query: 85 TIIDYTFRCAGPEGHEKVKNFITNAYAWYTKEMESTEDNARYMYSLVAAKEPPKKK-GASARYPDGMADAEGHPKKKEESSPIIYKRYMLGDVKDFDSLFFPEKEKLLRALENFQAKRGRYAIRGYPHKLGFLLHGPPGTGKTSLIKALACRTGRHIIQVPLGRVKTNEDLMNIMFDQSFRVATQELPVPLKHENVIY 675
T I Y FRC G+ KVK+FI AY WYT EM+STED++RYMYSL+A EP + + G GM + +G + + SP+ YKRY LGDVKDFDSLFFPEKE+LLR LENF+AKRGRYAIRGYPHKLG LLHGPPGTGKTSLIKALACRTGRHIIQVPLGRV TN+DLMNIM D+SF VA QELP+ L H+NVI+
Sbjct: 240 TTIVYDFRCDRQGGNIKVKDFIQKAYEWYTDEMKSTEDHSRYMYSLIAQPEPARSRLGIGGVEFPGM-NGDGRGRNPLDPSPLRYKRYRLGDVKDFDSLFFPEKEQLLRVLENFEAKRGRYAIRGYPHKLGLLLHGPPGTGKTSLIKALACRTGRHIIQVPLGRVNTNQDLMNIMLDESFPVAKQELPISLTHDNVIF 436
BLAST of mRNA_Ecto-sp13_S_contig17882.5446.1 vs. uniprot
Match: A0A6H5K675_9PHAE (ATPase_AAA_core domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K675_9PHAE) HSP 1 Score: 224 bits (570), Expect = 2.590e-69 Identity = 108/116 (93.10%), Postives = 110/116 (94.83%), Query Frame = 1
Query: 328 IIYKRYMLGDVKDFDSLFFPEKEKLLRALENFQAKRGRYAIRGYPHKLGFLLHGPPGTGKTSLIKALACRTGRHIIQVPLGRVKTNEDLMNIMFDQSFRVATQELPVPLKHENVIY 675
I YKRY LGDVKDFDSLFFPEKEKLLR LENF+AKRGRYAIRGYPHKLGFLLHGPPGTGKTSLIKALACRT RHIIQVPLGR+KTNEDLM IMFDQSFRVATQ LPVPLKHENVIY
Sbjct: 24 ISYKRYKLGDVKDFDSLFFPEKEKLLRVLENFEAKRGRYAIRGYPHKLGFLLHGPPGTGKTSLIKALACRTRRHIIQVPLGRIKTNEDLMKIMFDQSFRVATQALPVPLKHENVIY 139
BLAST of mRNA_Ecto-sp13_S_contig17882.5446.1 vs. uniprot
Match: D8LH94_ECTSI (AAA domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LH94_ECTSI) HSP 1 Score: 218 bits (555), Expect = 6.300e-63 Identity = 114/225 (50.67%), Postives = 149/225 (66.22%), Query Frame = 1
Query: 1 IYSLQTKDVEKLPETEASSKSSSRGAPPTIIDYTFRCAGPEGHEKVKNFITNAYAWYTKEMESTEDNARYMYSLVAAKEPPKKKGASARYPDGMADAEGHPKKKEESSPIIYKRYMLGDVKDFDSLFFPEKEKLLRALENFQAKRGRYAIRGYPHKLGFLLHGPPGTGKTSLIKALACRTGRHIIQVPLGRVKTNEDLMNIMFDQSFRVATQELPVPLKHENVIY 675
+Y Q V++ E + K+SS Y FRC+ +G E++ F+ A+ WY +EM+STED RY+Y+L+A +E A + G K K E YKRY L D KDFDSLFFPEK+ LLR L++F+ K G+YAI+GYPHKLG LLHGPPGTGKTS+IKALAC TGR+++ VPLGR+KTN++LM+I+FDQ F V +ELPV L ENVI+
Sbjct: 157 VYFQQVTGVQE--EGGSDKKNSSTKDVKKKTTYHFRCSERDGDERIDEFVQKAFRWYCEEMKSTEDQGRYLYTLIANEE--------------FASSAG--KDKGEGPVRKYKRYRLSDGKDFDSLFFPEKDALLRILQHFEDKSGKYAIKGYPHKLGLLLHGPPGTGKTSMIKALACHTGRNVVNVPLGRIKTNQELMDIVFDQRFAVVGEELPVTLGFENVIF 363
BLAST of mRNA_Ecto-sp13_S_contig17882.5446.1 vs. uniprot
Match: A0A8J5Y1R3_DIALT (AAA domain-containing protein n=2 Tax=Diacronema lutheri TaxID=2081491 RepID=A0A8J5Y1R3_DIALT) HSP 1 Score: 189 bits (479), Expect = 2.930e-52 Identity = 98/205 (47.80%), Postives = 125/205 (60.98%), Query Frame = 1
Query: 61 SSSRGAPPTIIDYTFRCAGPEGHEKVKNFITNAYAWYTKEMESTEDNARYMYSLVAAKEPPKKKGASARYPDGMADAEGHPKKKEESSPIIYKRYMLGDVKDFDSLFFPEKEKLLRALENFQAKRGRYAIRGYPHKLGFLLHGPPGTGKTSLIKALACRTGRHIIQVPLGRVKTNEDLMNIMFDQSFRVATQELPVPLKHENVIY 675
+SS G ++ +T RC GP ++V FI Y WY E+ D +RYMY L+ K S R D D++ K YKRY L D K FDSLFF +KE LL L NF K GRYAI GYPHKLG LLHGPPGTGKTSLIKALA T R I+ VPL R+ TN++LM+++FDQ + V +++P+ LK ++V+Y
Sbjct: 203 ASSFGGSKKVVAFTIRCEGPNAVQRVNGFIERCYTWYKGELSKKVDKSRYMYVLMT-------KTFSTRSNDNDGDSDAPDKS--------YKRYRLSDEKTFDSLFFAQKETLLHILANFAKKSGRYAISGYPHKLGLLLHGPPGTGKTSLIKALAHHTQRSIVNVPLSRISTNQELMDVVFDQRYSVKGEDVPIRLKFKDVVY 392
BLAST of mRNA_Ecto-sp13_S_contig17882.5446.1 vs. uniprot
Match: A0A7R9U422_9STRA (Hypothetical protein n=2 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9U422_9STRA) HSP 1 Score: 184 bits (467), Expect = 6.610e-51 Identity = 93/195 (47.69%), Postives = 126/195 (64.62%), Query Frame = 1
Query: 91 IDYTFRCAGPEGHEKVKNFITNAYAWYTKEMESTEDNARYMYSLVAAKEPPKKKGASARYPDGMADAEGHPKKKEESSPIIYKRYMLGDVKDFDSLFFPEKEKLLRALENFQAKRGRYAIRGYPHKLGFLLHGPPGTGKTSLIKALACRTGRHIIQVPLGRVKTNEDLMNIMFDQSFRVATQELPVPLKHENVIY 675
I + FR A P G E + +I A+ WY EME +DN+RYMY L PD + + ++ + YKRY L + K F +LFFPEKE+LL+ +E+FQAK G+Y I GYPHKLG LLHGPPGTGKTSLIKA+A T R+I+ V L R+KTN++LM+I+FDQSF V +++PV L +++I+
Sbjct: 214 ICFHFRTALPNGDEVINAWIEKAFEWYVDEMEKLQDNSRYMYVLA---------------PDATSLSNND---SQDDNQRKYKRYKLSEEKTFSALFFPEKEQLLKLMEHFQAKTGKYEIEGYPHKLGLLLHGPPGTGKTSLIKAMAIHTRRNIVSVNLSRIKTNQELMDIVFDQSFAVGGEDMPVKLSFKDIIF 390
BLAST of mRNA_Ecto-sp13_S_contig17882.5446.1 vs. uniprot
Match: A0A812US84_SYMMI (Hypothetical protein (Fragment) n=1 Tax=Symbiodinium microadriaticum TaxID=2951 RepID=A0A812US84_SYMMI) HSP 1 Score: 174 bits (442), Expect = 1.940e-49 Identity = 83/195 (42.56%), Postives = 125/195 (64.10%), Query Frame = 1
Query: 91 IDYTFRCAGPEGHEKVKNFITNAYAWYTKEMESTEDNARYMYSLVAAKEPPKKKGASARYPDGMADAEGHPKKKEESSPIIYKRYMLGDVKDFDSLFFPEKEKLLRALENFQAKRGRYAIRGYPHKLGFLLHGPPGTGKTSLIKALACRTGRHIIQVPLGRVKTNEDLMNIMFDQSFRVATQELPVPLKHENVIY 675
I + FR P+G +K+ +F+ A+ WY ++M++ D++RY+Y LV + D +YKRY L D K F LFF EK+ LL+ L +F+ K G+YAI+G+PHKLG LLHGPPGTGKTSLIKA+A TGR+++ +PL R++TN++LM+I+FDQSF V +++P+ L +++I+
Sbjct: 138 IRFEFRGDNPDGEKKINDFVQEAFDWYVEKMKALADHSRYLYMLVKSPXXXXXXXXXXXXXDAPTR--------------VYKRYKLSDEKSFACLFFREKQMLLKLLSHFKDKSGKYAIQGFPHKLGLLLHGPPGTGKTSLIKAMAQHTGRNVVSIPLARIETNQELMDIVFDQSFAVKGEDMPIKLSFKDIIF 318
BLAST of mRNA_Ecto-sp13_S_contig17882.5446.1 vs. uniprot
Match: A0A7S1U3S3_9STRA (Hypothetical protein (Fragment) n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1U3S3_9STRA) HSP 1 Score: 173 bits (439), Expect = 2.280e-48 Identity = 89/195 (45.64%), Postives = 124/195 (63.59%), Query Frame = 1
Query: 91 IDYTFRCAGPEGHEKVKNFITNAYAWYTKEMESTEDNARYMYSLVAAKEPPKKKGASARYPDGMADAEGHPKKKEESSPIIYKRYMLGDVKDFDSLFFPEKEKLLRALENFQAKRGRYAIRGYPHKLGFLLHGPPGTGKTSLIKALACRTGRHIIQVPLGRVKTNEDLMNIMFDQSFRVATQELPVPLKHENVIY 675
I + FR G E + +I A+ WY +EME +D++RYMY L A S D D + YKRY L + K F++LFFPEK++LL+ LE+FQAK G+Y I GYPHKLG LLHGPPGTGKTSLIKA+A T R+I+ + L R+KTN++LM+I+FDQ+F V +++P+ L +++I+
Sbjct: 219 ICFHFRTKLRNGDEVINAWIDKAFQWYIQEMEKLQDDSRYMYVLCAD-------ATSISNNDEGNDGQRK-----------YKRYKLSEEKTFNALFFPEKDQLLKLLEHFQAKTGKYEIEGYPHKLGLLLHGPPGTGKTSLIKAMAIHTRRNIVSINLSRIKTNQELMDIVFDQTFSVGGEDMPIKLSFKDIIF 395
BLAST of mRNA_Ecto-sp13_S_contig17882.5446.1 vs. uniprot
Match: A0A7S2HPD5_9STRA (Hypothetical protein (Fragment) n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2HPD5_9STRA) HSP 1 Score: 173 bits (438), Expect = 2.010e-47 Identity = 94/195 (48.21%), Postives = 118/195 (60.51%), Query Frame = 1
Query: 91 IDYTFRCAGPEGHEKVKNFITNAYAWYTKEMESTEDNARYMYSLVAAKEPPKKKGASARYPDGMADAEGHPKKKEESSPIIYKRYMLGDVKDFDSLFFPEKEKLLRALENFQAKRGRYAIRGYPHKLGFLLHGPPGTGKTSLIKALACRTGRHIIQVPLGRVKTNEDLMNIMFDQSFRVATQELPVPLKHENVIY 675
+ YTFR + E + +FI AY WY E+ EDN+RY+Y + G +KK S IYKRY L D K F SLFF EK+ L+ L +FQ K G+YAI+GYPHKLG LLHGPPGTGKTSLIKALA T R II VPL R+ TN++LM+IMFDQ + V E+P+ L ++VI+
Sbjct: 198 LQYTFRS---KSKESIDSFIETAYQWYLGELRKLEDNSRYLYEMQT----------------GXXXXXXXXEKK---SVKIYKRYKLSDEKCFQSLFFDEKDSLINVLGHFQKKTGKYAIKGYPHKLGLLLHGPPGTGKTSLIKALAQHTQRSIINVPLARIGTNQELMDIMFDQQYAVQGDEVPIKLGFKDVIF 370 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig17882.5446.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig17882.5446.1 >prot_Ecto-sp13_S_contig17882.5446.1 ID=prot_Ecto-sp13_S_contig17882.5446.1|Name=mRNA_Ecto-sp13_S_contig17882.5446.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=225bp IYSLQTKDVEKLPETEASSKSSSRGAPPTIIDYTFRCAGPEGHEKVKNFIback to top mRNA from alignment at Ecto-sp13_S_contig17882:531..3590+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig17882.5446.1 ID=mRNA_Ecto-sp13_S_contig17882.5446.1|Name=mRNA_Ecto-sp13_S_contig17882.5446.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=3060bp|location=Sequence derived from alignment at Ecto-sp13_S_contig17882:531..3590+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig17882:531..3590+ >mRNA_Ecto-sp13_S_contig17882.5446.1 ID=mRNA_Ecto-sp13_S_contig17882.5446.1|Name=mRNA_Ecto-sp13_S_contig17882.5446.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=675bp|location=Sequence derived from alignment at Ecto-sp13_S_contig17882:531..3590+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top |