mRNA_Ecto-sp13_S_contig1787.5439.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp13_S_contig1787.5439.1
Unique NamemRNA_Ecto-sp13_S_contig1787.5439.1
TypemRNA
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Homology
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BLAST of mRNA_Ecto-sp13_S_contig1787.5439.1 vs. uniprot
Match: A0A6H5KYV0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KYV0_9PHAE)

HSP 1 Score: 937 bits (2421), Expect = 0.000e+0
Identity = 559/614 (91.04%), Postives = 569/614 (92.67%), Query Frame = 1 
Query:  664 EDENSLEEIQASIEELLGMQGLGSGSWNNEPGGGVPAAVEREQRTLVREIKALGRRGRWGDVLEVVARARYQGTQLNSIIYGCAINAVGRSGRYKECMILLDWSIEDIEPDEYCYKAAIIACSAANQWGHALDLFRRFQRATDGTGGASPPAAAGAAGDKAEGIAPGTAIYNAVITACARGLFTEEALAFILEMGERGVRRDEGTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDAMRGNNAQDDDHDLTQILLLLGEERPDTSPSSPPASAEERQEPL----EPL------GSPDGVEFRVAAPFSSLFSPPAPDVRSYNSCIAACRRGGQSGLAKLFFHDMLSRGLRPDVWTFKSAVLDRLQAQPPTXXXXXXXXXXXXTKAGIRQDQEISSRPDFSGGQERLPPSRAPQQARSPWRALLVLLEEVDGEGLGPDTPCINLALTECARAGRWEESRNLLEDLREASPPGGSLRPSVSRYNSVLRTLRNAPARDRRTTFGAPATPPLGGEITPAGGDDSRVDGDSVYLEAAGGRWSGAEGWAEGHVFGFLEDMRAAGVTPDRDTYQCAIRCATDAALLDIAKAEKAA 2475
            EDENSLEEIQASIEELLGMQGLGSGSWNNEPGGGVPAAVEREQRTLVREIKALGRRGRWGDVLEVVARARYQGT+LNSIIYGCA+NAVGRSGRYKECMILLDWS EDIEPDEYCYKAAIIACSAANQWG ALDLFRRFQRATDG GGASPPAAAGAAGDKA+G+ PGTAIYNAVITACARGLFTEEALAF LEMG+RG+RRDEGTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDAMRGNNAQDDDHDL QILLLLGEE PDT        AEERQEPL     P       GSPD VEFRVA P SSL SPPAPDVRSYNSCIAACRRGGQSGLAKLFFHDMLSRGLRPDVWTFKSAVLDRLQAQPPTXXXXXXXXXX  TKAG R+DQE+SSRPDFSGGQERLPPSRAPQQARSPWRALLVLLEEVDGEGLGPD PCINLALTECARAGRWEESRNLLEDLREASPPGGSLRP VSRYNSVLRTLRNAPAR  RTTFGAP TPPLGGE+TPAGGD  RVDGD V LEAAGGRWSGAEGW +GHV GFLEDMRAAGVTPDRDTYQCAIRCATDAALLDIAKAEKAA
Sbjct:  150 EDENSLEEIQASIEELLGMQGLGSGSWNNEPGGGVPAAVEREQRTLVREIKALGRRGRWGDVLEVVARARYQGTELNSIIYGCAMNAVGRSGRYKECMILLDWSTEDIEPDEYCYKAAIIACSAANQWGRALDLFRRFQRATDGVGGASPPAAAGAAGDKAKGVTPGTAIYNAVITACARGLFTEEALAFFLEMGDRGIRRDEGTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDAMRGNNAQDDDHDLVQILLLLGEELPDTPXXXXXXXAEERQEPLASNHSPTTATAKGGSPDDVEFRVAVPSSSLSSPPAPDVRSYNSCIAACRRGGQSGLAKLFFHDMLSRGLRPDVWTFKSAVLDRLQAQPPTXXXXXXXXXX--TKAGTRRDQEVSSRPDFSGGQERLPPSRAPQQARSPWRALLVLLEEVDGEGLGPDPPCINLALTECARAGRWEESRNLLEDLREASPPGGSLRPGVSRYNSVLRTLRNAPARKCRTTFGAPTTPPLGGEVTPAGGDGIRVDGDFVDLEAAGGRWSGAEGWVQGHVSGFLEDMRAAGVTPDRDTYQCAIRCATDAALLDIAKAEKAA 761
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BLAST of mRNA_Ecto-sp13_S_contig1787.5439.1 vs. uniprot
Match: D8LDQ5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LDQ5_ECTSI)

HSP 1 Score: 927 bits (2395), Expect = 0.000e+0
Identity = 565/656 (86.13%), Postives = 586/656 (89.33%), Query Frame = 1 
Query:  649 SSKGGEDENSLEEIQASIEELLGMQGLGSGSWNNEPGGGVPAAVEREQRTLVREIKALGRRGRWGDVLEVVARARYQGTQLNSIIYGCAINAVGRSGRYKECMILLDWSIEDIEPDEYCYKAAIIACSAANQWGHALDLFRRFQRATDGTGGASPPAAAGAAGDKAEGIAPGTAIYNAVITACARGLFTEEALAFILEMGERGVRRDEGTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDAMRGNNAQ-DDDHDLTQILLLLGEERPDTSPSSPPASAEERQEPL----EPL------GSPDGVEFRVAAPFSSLFSPPAPDVRSYNSCIAACRRGGQSGLAKLFFHDMLSRGLRPDVWTFKSAVLDRLQAQPPTXXXXXXXXXXXXTKAGIRQDQEISSRPDFSGGQERLPPSRAPQQARSPWRALLVLLEEVDGEGLGPDTPCINLALTECARAGRWEESRNLLEDLREASPPGGSLRPSVSRYNSVLRTLRNAPARDRRTTFGAPATPPLGGEITPAGGDDSRVDGDSVYLEAAGGRWSGAEGWAEGHVFGFLEDMRAAGVTPDRDTYQCAIRCATDAALLDIAKAEKAAEEEEAVGKGGTVARGSDEGALSRGGGGGIVVDVDPM 2583
            SS+GGEDENSLEEIQASIEELLGMQGLGSGSWNNEPGGGVPAAVEREQRTLVREIKALGRRGRWGDVLEVVARAR+QGT+LNSIIYGCA+NAVGRSGRYKECMILL+WS EDIEPDEYCYKAAIIACSAANQWG ALDLFRRFQRATDG GGASPPAAAGAAGD A+G APGTAIYNAVITACARGLFTEEALAF LEMGERGVRRDE TXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX   RGN+AQ DDDHDL +I                       QEPL     P       GSPDGVEFRVAA  SSLFSPP+PDVRSYNSCIAACRRGGQSGLA+LFFHDMLSRGLRPDVWTFK AVL RLQAQPPT XXXXXXXXXX TKAG RQD EISSRP FSGGQERLPPSRAPQQARSPWRALLVLLE+VDGEGLGPD PCINLALTECARAGRWEESR+LLEDLREASPPGGSL P VSRYNSVLRTLRNAPARDRRTT GAP  PPLGGE+TPAGG  SR+D + V LEAAGGRWSGAEGWA+GHV GFLEDMRAAGVTPDRDTYQCAIRCATDAALLDIAKAEKAA EE AVGKGGTVARGSD+GAL+RGGGGG+V+DVDP+
Sbjct:   23 SSRGGEDENSLEEIQASIEELLGMQGLGSGSWNNEPGGGVPAAVEREQRTLVREIKALGRRGRWGDVLEVVARARHQGTELNSIIYGCAMNAVGRSGRYKECMILLEWSTEDIEPDEYCYKAAIIACSAANQWGRALDLFRRFQRATDGIGGASPPAAAGAAGDNAKGFAPGTAIYNAVITACARGLFTEEALAFFLEMGERGVRRDEVTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRGNDAQEDDDHDLAEIXXXXXXXXXXXXXXXXXXXXXXXQEPLASNHSPTTATAKGGSPDGVEFRVAA-LSSLFSPPSPDVRSYNSCIAACRRGGQSGLARLFFHDMLSRGLRPDVWTFKCAVLGRLQAQPPTPXXXXXXXXXX-TKAGTRQDPEISSRPGFSGGQERLPPSRAPQQARSPWRALLVLLEDVDGEGLGPDPPCINLALTECARAGRWEESRSLLEDLREASPPGGSLLPGVSRYNSVLRTLRNAPARDRRTTLGAPTAPPLGGEVTPAGGGGSRIDEEFVDLEAAGGRWSGAEGWADGHVSGFLEDMRAAGVTPDRDTYQCAIRCATDAALLDIAKAEKAAAEEAAVGKGGTVARGSDKGALNRGGGGGVVMDVDPV 676
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BLAST of mRNA_Ecto-sp13_S_contig1787.5439.1 vs. uniprot
Match: A0A6H5L8D4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L8D4_9PHAE)

HSP 1 Score: 79.0 bits (193), Expect = 3.340e-11
Identity = 40/111 (36.04%), Postives = 63/111 (56.76%), Query Frame = 1 
Query:  763 GVPAAVEREQRTLVREIKALGRRGRWGDVLEVVARARYQGTQLNSIIYGCAINAVGRSGRYKECMILLDWSIED---IEPDEYCYKAAIIACSAANQWGHALDLFRRFQRA 1086
            G  +   RE+  LV  +K +GRR  W   ++V  RAR +G  +++ +Y C I+ V +SGR+ E + LL  + ED   ++P++YCY AA+ AC+    W  AL L    + A
Sbjct:   66 GCESEAARERIELVLRLKDMGRRFEWRGAVKVFRRARARGMVMDNSVYSCIISVVAKSGRWSEAVELLQEAKEDPAGLDPNKYCYTAAVSACARGRNWELALALLDEMREA 176
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BLAST of mRNA_Ecto-sp13_S_contig1787.5439.1 vs. uniprot
Match: A0A835YLF2_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YLF2_9STRA)

HSP 1 Score: 74.3 bits (181), Expect = 1.100e-9
Identity = 39/103 (37.86%), Postives = 62/103 (60.19%), Query Frame = 1 
Query:  766 VPAAVEREQRTLVREIKALGRRGRWGDVLEVV--ARARYQGTQLNSIIYGCAINAVGRSGRYKECMILLDWSIE-DIEPDEYCYKAAIIACSAANQWGHALDL 1065
            + +AV   Q+TL+RE+ ALGR+GRW + L  +  AR       +N+ I+G AI+A+ RS ++++ + +L+   E  + PD  C  AAI AC++A  W  A  L
Sbjct:  155 IDSAVLERQKTLLRELNALGRQGRWSEALARLDAARGAEDPIPMNAYIFGAAISALARSRKWQQALGVLETMREAGVRPDTVCLNAAIAACASAGAWSEARHL 257
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig1787.5439.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
A0A6H5KYV0_9PHAE0.000e+091.04Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LDQ5_ECTSI0.000e+086.13Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5L8D4_9PHAE3.340e-1136.04Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A835YLF2_9STRA1.100e-937.86Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig1787contigEcto-sp13_S_contig1787:6276..13541 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop1
Start1
Seed ortholog score934.9
Seed ortholog evalue2.7e-269
Seed eggNOG ortholog2880.D8LDQ5
Model size3234
Hectar predicted targeting categoryother localisation
Exons8
EggNOG free text desc.endonuclease activity
EggNOG OGsKOG4197@1,KOG4197@2759
Ec32 ortholog descriptionPentatricopeptide repeat
Ec32 orthologEc-19_001550.1
Cds size2511
COG Functional cat.S
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig1787.5439.1prot_Ecto-sp13_S_contig1787.5439.1Ectocarpus species13 EcNAP12_S_4_19mpolypeptideEcto-sp13_S_contig1787 6354..12896 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681462925.4250953-UTR-Ecto-sp13_S_contig1787:6275..63531681462925.4250953-UTR-Ecto-sp13_S_contig1787:6275..6353Ectocarpus species13 EcNAP12_S_4_19mUTREcto-sp13_S_contig1787 6276..6353 +
1681462925.5114534-UTR-Ecto-sp13_S_contig1787:12896..135411681462925.5114534-UTR-Ecto-sp13_S_contig1787:12896..13541Ectocarpus species13 EcNAP12_S_4_19mUTREcto-sp13_S_contig1787 12897..13541 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681462925.4353063-CDS-Ecto-sp13_S_contig1787:6353..64391681462925.4353063-CDS-Ecto-sp13_S_contig1787:6353..6439Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig1787 6354..6439 +
1681462925.443213-CDS-Ecto-sp13_S_contig1787:7208..78601681462925.443213-CDS-Ecto-sp13_S_contig1787:7208..7860Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig1787 7209..7860 +
1681462925.4512324-CDS-Ecto-sp13_S_contig1787:8343..84351681462925.4512324-CDS-Ecto-sp13_S_contig1787:8343..8435Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig1787 8344..8435 +
1681462925.4591813-CDS-Ecto-sp13_S_contig1787:8855..89371681462925.4591813-CDS-Ecto-sp13_S_contig1787:8855..8937Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig1787 8856..8937 +
1681462925.4691346-CDS-Ecto-sp13_S_contig1787:9275..95571681462925.4691346-CDS-Ecto-sp13_S_contig1787:9275..9557Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig1787 9276..9557 +
1681462925.4791658-CDS-Ecto-sp13_S_contig1787:9824..99731681462925.4791658-CDS-Ecto-sp13_S_contig1787:9824..9973Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig1787 9825..9973 +
1681462925.489034-CDS-Ecto-sp13_S_contig1787:11084..117391681462925.489034-CDS-Ecto-sp13_S_contig1787:11084..11739Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig1787 11085..11739 +
1681462925.5006294-CDS-Ecto-sp13_S_contig1787:12383..128961681462925.5006294-CDS-Ecto-sp13_S_contig1787:12383..12896Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig1787 12384..12896 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp13_S_contig1787.5439.1

>prot_Ecto-sp13_S_contig1787.5439.1 ID=prot_Ecto-sp13_S_contig1787.5439.1|Name=mRNA_Ecto-sp13_S_contig1787.5439.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=837bp
MNLPTSCCNVNVMAFVVQPSFPAVLPASRQPNVRRRRRPSWTTTITTSPP
TGGDAPHGPAASFSSLALLASKQPPPPRQAPQGGRPTNGDEDSPSTATSR
RRYPPRLQPSRENADKNKSGLAESFATPLPPPPPPQPRPPPNTKSTKRPR
IPVPPLQRAFGMGGASSSVNGSAERRGRGGAGAGAGAGGGSSKGGEDENS
LEEIQASIEELLGMQGLGSGSWNNEPGGGVPAAVEREQRTLVREIKALGR
RGRWGDVLEVVARARYQGTQLNSIIYGCAINAVGRSGRYKECMILLDWSI
EDIEPDEYCYKAAIIACSAANQWGHALDLFRRFQRATDGTGGASPPAAAG
AAGDKAEGIAPGTAIYNAVITACARGLFTEEALAFILEMGERGVRRDEGT
YTAAIDACARGGLWRRGLDLLSEMQTAGLRPSLASYNAALDGCGREGRWE
EAADLIDAMRGNNAQDDDHDLTQILLLLGEERPDTSPSSPPASAEERQEP
LEPLGSPDGVEFRVAAPFSSLFSPPAPDVRSYNSCIAACRRGGQSGLAKL
FFHDMLSRGLRPDVWTFKSAVLDRLQAQPPTPPAPAAAAAAAATKAGIRQ
DQEISSRPDFSGGQERLPPSRAPQQARSPWRALLVLLEEVDGEGLGPDTP
CINLALTECARAGRWEESRNLLEDLREASPPGGSLRPSVSRYNSVLRTLR
NAPARDRRTTFGAPATPPLGGEITPAGGDDSRVDGDSVYLEAAGGRWSGA
EGWAEGHVFGFLEDMRAAGVTPDRDTYQCAIRCATDAALLDIAKAEKAAE
EEEAVGKGGTVARGSDEGALSRGGGGGIVVDVDPMR*
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mRNA from alignment at Ecto-sp13_S_contig1787:6276..13541+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp13_S_contig1787.5439.1 ID=mRNA_Ecto-sp13_S_contig1787.5439.1|Name=mRNA_Ecto-sp13_S_contig1787.5439.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=7266bp|location=Sequence derived from alignment at Ecto-sp13_S_contig1787:6276..13541+ (Ectocarpus species13 EcNAP12_S_4_19m)
CAGCCAGAGTGAGATTTGGCACAACGTGCGACGTGACAGCAGTGCCGCTT
TACACATGCCGTGCAAAACAACGTGGACATGAACCTTCCGACGTCGTGTT
GCAATGTCAATGTCATGGCCTTCGTGGTCCAGCCGTCATTTCCGGCCGTC
CTCCCGGCTAGCAGGTGAGGTGAACTTGCCGCCCGCGTTACTGCAATACA
GCAGTAACAGCCGTCGCGCACAGCAGTTGTCGCGGGAGGTTTTCCTGTAT
GACAAGTACACGGTTGTGGCTGCGTGACTGCGATCGGTTGCTTAGGCTCC
TTTTCCTAGCTTCGATGCACCAGCGTTTGTCTCTGGAACAAGTCTCCACA
TCCACGTCCACGCCAGCTGGTGTTGTTGACTCACAATATCTTAGTTTAAA
CGTTCAAACCTTCAAGAGACCAGGCCTATCGCCCTGCTGCCTCCTATTCT
ACGACGGCAGTTGTTCTTCAACACTCAATTGAAGTTTGCCCCCGTCTCAA
CAGTAAGGTGTTCCCTTTTCCTGTACCATCAGCAAGTCAGTGGATTCCCT
GCTGCTTCATGAAGTTGCTTTAGAGTAAAGAGAACTTCTCCTGGCTTTGC
GGACTATCTGTGAGTTTGACTCAGCAGCTTGACTCGACACGTGAGAGTGA
CCCTCTTCCCATTTGGATGTGCCCCATGTGTTCTGCATTGCGTTACGTGC
TGTGTGAGCCTCCACCATCTGCGTGTGCGCATCGTCTTCGAACAAGACCG
CCAGACTACTCCGCCAACATGCAGACAACAACACAGCTACAGCAGCACAC
ATACTGAAACTCAGCACCAAAAATATGCGCTTGGCGTTCGGCATTTTCTC
AGATATTTCTGATGGTTTCACCAGGCGCATGCTTCCCCCAGAGGAAACAA
TACGTCCCACCCCACCCCTTTGCCGCCACACAGGCAACCGAACGTGAGGC
GAAGACGACGTCCGTCATGGACTACGACGATAACAACGTCGCCGCCAACA
GGCGGAGACGCCCCGCACGGACCCGCCGCTTCCTTCTCCTCGCTGGCCCT
CCTAGCCTCCAAGCAGCCGCCGCCGCCCCGGCAAGCGCCACAGGGAGGAC
GTCCGACAAACGGCGACGAAGATTCTCCGTCGACAGCAACGTCACGGAGG
CGTTACCCCCCGAGACTACAACCCTCCCGTGAGAACGCGGACAAAAACAA
AAGTGGCCTTGCCGAATCGTTCGCGACCCCCCTCCCCCCTCCGCCACCAC
CGCAACCGCGGCCGCCACCGAATACCAAGAGCACGAAGCGGCCACGCATT
CCCGTGCCCCCCTTGCAGCGGGCCTTCGGGATGGGCGGAGCGTCGTCTTC
GGTCAATGGCTCCGCGGAGCGCCGCGGGCGCGGCGGTGCCGGCGCCGGCG
CCGGCGCCGGAGGGGGCAGCAGCAAGGGGGGCGAGGACGAAAATTCCTTG
GAGGAAATCCAGGCGTCCATCGAGGAGCTCCTGGGCATGCAGGGCTTGGG
GTCCGGGAGTTGGAACAACGAGCCCGGCGGAGGCGTTCCTGCGGCGGTGG
AGCGAGAGCAGCGGACTCTTGTCCGCGAGATCAAGGTGAAAGTGAAGAGG
GCGTGAGGGTTGTGGCTGCAAAGAAAGATATGCAGCAGAATGCCACGCGA
GGTACTGCCGTGTCCAGGCGCGTGGGTGGAGGGGTGTCGGGAGGTGTTTC
GAGCAAGTGCTCCACCCCGCGCGTTGGGTCAGTCGGGTCCGAATATCATC
TTCGATATTCGTGCGAATACTAAAAGGGGTGAAATAGGTTCGGCTCAGAC
GTTGGAGACGGCTTACGTCGAATCGTAGCGCGCGGCTTTCATTCGAAGCT
TCTCCACTTTTCGCGTTAGGCCAAGCCATAAATGACCTGAGTATGCGTGA
GCGCGCCGGCCGTTTTTTATCAGCTACGATACGATCTTGCCTTGTGGTCG
GTGGATCGATGCCGAGCGCACTTGCCTCGCAAGGGCAATACCACGGCTCC
CTTGCTTGGAAACCCAGACTAACCACAGCAGTGATGGCCCCGCACCTTCC
GACCTCAAAACACGGCAGGCGCTTGGGCGGAGGGGCCGATGGGGCGACGT
GCTGGAAGTGGTCGCACGGGCACGCTACCAAGGCACGCAGCTGAACTCGA
TTATCTACGGGTAGGTGCACGCTTCCTCCCTTCCTTCCTTCCGTGGCGTA
GCGTAGCAAGAGTTTTGCTTATCGCCAGTTTGGTTGAGTGCGCTTTTACG
TCTACGAGGTTTTCCTATTGGCTCCCGTTGACCGAAACAGTAGATAGCTA
ACTGGGGCAAGTGATCCCTCAGGGGTGGGCTCATGAAAGCACGGCGTCAC
CAAGGGGTGATGGCAAGATGGAAATTAAAGCCGACTGCGAGCTCCTGCTG
TGTGATGTTTCCCAAGCTCACACGGCTGACTTGTTTTGGACTCCAACCGT
CCAGCCAACCTCAACCTTACCAAAAAGAAAAATTTGAAATCCTGTGTTCA
GTCTTACAGCTTCCTCCCCTTCCTCCCCCCCCACCCCTCCGAATCCAATG
TTTTGCTCGGTACACGAACCTGCCCTCTAGGTGCGCCATAAACGCAGTTG
GAAGAAGTGGTCGCTACAAGGAGTGCATGATCCTACTCGACTGGTCGATA
GAGGATATCGAGGTGCGCTTACGGGGCACGCAAAGTGGAGCGGTCACGAT
AATCGTGGATGCTTGTTCGCTTTCGGCCCCTTCATTTGAAACGCAACCTC
GACGTCTAGAGAACGTCAAACTTATTGGGAAGTCTAGAGAAGTAAGCACT
TGTTCGACTGGTTGGTATATCGCGCCTTGCGACCTTAGGTGACAACGAAC
TGAACCGTGCGAGGTTTGCGATGAAGGGTCTTGCTGTCAAGCACGACAAG
CAGGTGGAGTCGGGTCAAGTACAAGTGATCCCCGTCTACATTTCCGCGTC
ATGAGTTCCGCCTTTGCCCTTCGTTTTTTTTTTTTTGTTCGTATTAGCAG
CCCGACGAGTACTGCTACAAGGCCGCCATCATCGCGTGCTCGGCGGCGAA
TCAGTGGGGACACGCGCTGGACCTATTCCGCCGCTTTCAGCGCGCCACCG
ATGGCACGGGGGGGGCGTCTCCGCCCGCCGCCGCCGGCGCTGCTGGCGAT
AAGGCCGAAGGGATTGCCCCTGGCACGGCGATCTACAACGCGGTCATCAC
AGCCTGCGCTCGGGGTTTGTTCACAGAGGAGGCGTTGGCGTTTATCCTCG
AGATGGGGGAGCGGGGAGTTCGCCGGGATGAGGTGGGAGCCGCCGCGCAG
CGACCTTTTGGGGGCTCCGTAGCTTGAATGGTTTCGAGGGTTTTGGTCGC
GCAAGCAGACTTGGAGAGCCGCTGCTATCGGTGAGGTTGCCTCGAACAAC
GAGGGTTGGTGGCGCAACTAGACTCGAGAGTCGCTGGGATTGGTGGGTTA
GTGGTGATGGGGTTGTCTTGGAACAACAACCACTCTCGACCCTCTCCCCC
CTCCCGTTTATATCGCGGCGAAATTCTCCGAACGCTGTTTTTTTGTTAGG
GCACGTATACCGCGGCCATCGACGCCTGCGCGAGGGGGGGGCTGTGGCGG
AGGGGGCTCGATCTCTTGTCTGAGATGCAGACGGCCGGGCTCCGGCCGTC
CCTGGCGAGCTATAACGCAGCTCTGGACGGCTGCGGGCGCGAGGGAAGGT
GCGTGTCTGCCGCCGCCTAGCCAAAGGCCAAAGAGAGGGCGGAGGTACGG
GTGTACAGCAAAGAGAAACTCCTGTACCAGGTACATAGTCACAAGCCGTC
GCTTCTTAATTTCCTTCCCCCGAGACGTCCGTGGCGAAAACGCCAAGCGT
CACGTGTCGACTTCACCATGATTGGAGAGGTCGACGTGTAGCGCGTGGCG
GTCTCGCTGTCGAGGGGTTGGGGGAAGGAACGAAAGAAGCGCTGCACGGG
AGAACACAAACACACAAAAACACACACAGGGGTGTGCTTTTGCAGCAACG
AAAGGGGACAACTGGCGGGCAGGCAGAGCGGTTCAGACCTTGCGAACTAC
CTAGAAGTCGAAATCAAACCATTGGACTAGTCAGCGGTTTATCTGCCACC
CCACGCCCCTGTGCGTTGTGTGTTCTCCCTTCCGTGGAACGAAAGAAGAA
TTGCACGGGAGAAGCACAACAACACGCAGTTAGGTGTGTGCCATGGCAGC
AGCAGCAGCAAGCGATAGAGAGGGGACAGCAAGCAGGCACAACAGTGCGG
TCCGGTGCGGACCCTTGCTTGGCGAACGCTTCGTTTGTTGCATCCCGATC
GATGATATGAATGATACGGGAACCATGTTTGTGTTGCGGCCGCCTCGATG
GAGGACCTCGTGAACGACTACATTGCCCGGCAGACACATCACGCGTACTG
CTGTAGCTGTCGTCAGCCTTTCTGCTGGCCGCGTTTCGGACCGTATCTTC
TTTTGGGTGTCTCAAGGTTGCTTATTCCTGGATACCGACGGTGTCGTAGA
CATCGTTTTCGCGTGGACTGCTTGCTGTGTTTCGAAGGCCGTGTTGGCCA
TAATTGTGGTGCCTCCGGGGGAAAGGATGTTACGCGGCATGCTGTTGAAG
AGGACAGACGGCCTTCCCAAGTCGTTTCCTCCATTGTGCTTGTGTGTGTG
TTTTCTTCTATATCGACCGCGCCATCCGGAAGACCAATGAGAAGACGCAA
GTCTCAGTGCGGATACAACATGTTGCCAAAGACCATGATCTGAGACCCCC
CCCCCCCCCCCGTGCGTGTGTATGTGTGTACATGTTCATGTTTTTACTTG
CATCGAAAGGTGGGAAGAAGCAGCCGATCTTATCGACGCCATGAGAGGAA
ACAATGCTCAAGATGACGACCACGACCTCACGCAGATCCTTCTCCTGCTG
GGTGAGGAACGACCTGACACGTCGCCATCTTCCCCTCCGGCATCAGCAGA
AGAACGACAAGAACCACTCGAACCACTCGGCTCTCCCGACGGCGTGGAAT
TTCGGGTGGCGGCGCCCTTTTCGTCGCTGTTCTCGCCCCCTGCGCCGGAC
GTCCGCTCGTACAACTCCTGCATCGCGGCGTGCCGTCGTGGCGGTCAGAG
CGGCCTCGCCAAACTCTTCTTCCACGACATGCTGTCCCGGGGACTGAGAC
CCGACGTCTGGACCTTCAAGTCCGCGGTATTGGACCGCCTGCAGGCGCAA
CCACCTACGCCCCCTGCCCCCGCCGCCGCCGCCGCCGCCGCCGCCACAAA
GGCGGGAATACGCCAGGATCAGGAAATTTCTTCGCGGCCGGATTTTTCTG
GCGGCCAGGAGCGTTTGCCGCCTTCCCGGGCTCCTCAGCAGGCGCGGTCC
CCCTGGCGGGCGTTGCTGGTGCTCCTTGAGGAAGTGGACGGGGAGGGGCT
GGGTCCCGACACGCCGTGCATCAACCTGGCGCTGACGGAGTGCGCGAGGG
CCGGGCGCTGGGAGGTGAGAGGCCCCCGTATCGTGTGGGCGTTTGTAGTA
GGAGATGTGGGACGACGGAGGTGTCGGGTTGTGGTGTTGCCGTTGCCGGG
TCTGTTGTTCCATGTTCACCTGTTCGTTCGGCGGGGGTCCCCAAACGAGG
TGGTGGTGGGGGCAGCTAATGACGACCGCCCTACAAGTGAAGCAGCCGCC
TTTTTCAATGTGTAGAACAGCTTTGGTTATTTCGTCCATGCTAGTCAGTT
CCACCGGCCTTATCTCTAGGGCGACCGCCTTGTTCGGGGACCCCTAATGT
ATGTGTTTTAGAGCGGGCTTTTTTTCCAGGTGGCCGTGGTGCCCTCTCTT
GCCTCTCTGTGGTTGGGGAAGCAGAATGCCGGAACAGCTCAGGAGTGCCC
GTCGATCCCGAAATCCTGCTCCCCCAGCTTCTTGGCAAGTGTGGTGTCAC
CTCTCTATTTGTCCCGCCTCTGCGCGCCCCGATGGCCAGCCTGTCCAAGA
TGTCCATCATTGCCTGTAGAATACGATAGACAGCAGCCATACCCTCCAAG
AAAACTAACTCTCTTGCTGCTGCTGTAGTGATATTTTTCCTTGCGTTATT
GCGACTTTCTTTGAAACAAGATTCCCGTCCCACCTCCTTCTCCCTCCCCA
ACTCCCAGGAGAGTCGCAACCTCCTAGAAGACCTGAGGGAAGCATCCCCG
CCCGGGGGGTCACTCCGCCCCAGTGTGTCGAGATACAACTCCGTGCTCAG
GACGCTGCGCAACGCGCCTGCACGCGACCGCCGAACAACCTTCGGCGCTC
CTGCTACTCCACCGCTGGGTGGGGAGATCACGCCGGCAGGAGGAGACGAC
AGTAGGGTCGACGGAGATTCCGTATATCTGGAGGCGGCGGGCGGGAGGTG
GTCGGGGGCGGAGGGTTGGGCGGAGGGTCACGTGTTCGGCTTCCTCGAAG
ACATGCGGGCTGCGGGGGTGACGCCGGACAGGGATACCTACCAGTGCGCC
ATCCGCTGTGCCACCGACGCCGCTCTGTTGGACATCGCCAAGGCCGAAAA
GGCGGCGGAGGAGGAGGAGGCGGTGGGGAAGGGCGGGACGGTAGCCAGGG
GCAGTGACGAGGGCGCCCTTAGCCGTGGTGGTGGTGGTGGCATCGTGGTG
GATGTCGACCCTATGAGATAGATTGGCGTTGCGGCGTTACTAGATGCTGT
GCTGCTCTTGCCGCCCGGCCGTGACGCCGGTGGCGTAGAGGCGTGGTTTA
TGGTACTGCTGAAGGTCGTTCAGATTGGTCTTTTGAGGGAAACATGATGT
GCCCCCCCCACCAAGGATGACTCCGTTCGTAATAGAGCTTGTTACTGTGA
ATATGAAACATAATATGTACATGAAATGCGTGAGTGAGTATTGATGGGAA
GTGTAAGTGTGATATGACACTCAATTGGCGTGCCCGCGGGTGTCCTGGGT
GGGTAGGTGGATGGTCTAGGGGTTGGTTGGAGGTGGGGATGGATGATGTC
TCCGGGGTGCTCGCTATTCGTCCATAGACAGCCTCAATCGTCCGGAATTG
GCTTGCGCGTGTGTGATTTCATGGGTTTGTGTGGTCGATGTCGTCGAACC
TGAAGTGTTGTGAATTTCACAAGGGTGCGTAAAACTTGAAGTAAGTGCGT
AGACCAATAATTGTAGCTCGCCTTCGGTTCGGTTCTGCTGTAGCGGGCAT
GGACATGAGACATACGTTTGTTCACGCTTGACTCGTCGTGTATTCGTGGT
TGATGTCTGGTTGTTCTTTGTTGAACTTGAAGGTGGCGGAAAAAAACAAC
GTCTTCTATGCCACCA
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Coding sequence (CDS) from alignment at Ecto-sp13_S_contig1787:6276..13541+

>mRNA_Ecto-sp13_S_contig1787.5439.1 ID=mRNA_Ecto-sp13_S_contig1787.5439.1|Name=mRNA_Ecto-sp13_S_contig1787.5439.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=2511bp|location=Sequence derived from alignment at Ecto-sp13_S_contig1787:6276..13541+ (Ectocarpus species13 EcNAP12_S_4_19m)
ATGAACCTTCCGACGTCGTGTTGCAATGTCAATGTCATGGCCTTCGTGGT
CCAGCCGTCATTTCCGGCCGTCCTCCCGGCTAGCAGGCAACCGAACGTGA
GGCGAAGACGACGTCCGTCATGGACTACGACGATAACAACGTCGCCGCCA
ACAGGCGGAGACGCCCCGCACGGACCCGCCGCTTCCTTCTCCTCGCTGGC
CCTCCTAGCCTCCAAGCAGCCGCCGCCGCCCCGGCAAGCGCCACAGGGAG
GACGTCCGACAAACGGCGACGAAGATTCTCCGTCGACAGCAACGTCACGG
AGGCGTTACCCCCCGAGACTACAACCCTCCCGTGAGAACGCGGACAAAAA
CAAAAGTGGCCTTGCCGAATCGTTCGCGACCCCCCTCCCCCCTCCGCCAC
CACCGCAACCGCGGCCGCCACCGAATACCAAGAGCACGAAGCGGCCACGC
ATTCCCGTGCCCCCCTTGCAGCGGGCCTTCGGGATGGGCGGAGCGTCGTC
TTCGGTCAATGGCTCCGCGGAGCGCCGCGGGCGCGGCGGTGCCGGCGCCG
GCGCCGGCGCCGGAGGGGGCAGCAGCAAGGGGGGCGAGGACGAAAATTCC
TTGGAGGAAATCCAGGCGTCCATCGAGGAGCTCCTGGGCATGCAGGGCTT
GGGGTCCGGGAGTTGGAACAACGAGCCCGGCGGAGGCGTTCCTGCGGCGG
TGGAGCGAGAGCAGCGGACTCTTGTCCGCGAGATCAAGGCGCTTGGGCGG
AGGGGCCGATGGGGCGACGTGCTGGAAGTGGTCGCACGGGCACGCTACCA
AGGCACGCAGCTGAACTCGATTATCTACGGGTGCGCCATAAACGCAGTTG
GAAGAAGTGGTCGCTACAAGGAGTGCATGATCCTACTCGACTGGTCGATA
GAGGATATCGAGCCCGACGAGTACTGCTACAAGGCCGCCATCATCGCGTG
CTCGGCGGCGAATCAGTGGGGACACGCGCTGGACCTATTCCGCCGCTTTC
AGCGCGCCACCGATGGCACGGGGGGGGCGTCTCCGCCCGCCGCCGCCGGC
GCTGCTGGCGATAAGGCCGAAGGGATTGCCCCTGGCACGGCGATCTACAA
CGCGGTCATCACAGCCTGCGCTCGGGGTTTGTTCACAGAGGAGGCGTTGG
CGTTTATCCTCGAGATGGGGGAGCGGGGAGTTCGCCGGGATGAGGGCACG
TATACCGCGGCCATCGACGCCTGCGCGAGGGGGGGGCTGTGGCGGAGGGG
GCTCGATCTCTTGTCTGAGATGCAGACGGCCGGGCTCCGGCCGTCCCTGG
CGAGCTATAACGCAGCTCTGGACGGCTGCGGGCGCGAGGGAAGGTGGGAA
GAAGCAGCCGATCTTATCGACGCCATGAGAGGAAACAATGCTCAAGATGA
CGACCACGACCTCACGCAGATCCTTCTCCTGCTGGGTGAGGAACGACCTG
ACACGTCGCCATCTTCCCCTCCGGCATCAGCAGAAGAACGACAAGAACCA
CTCGAACCACTCGGCTCTCCCGACGGCGTGGAATTTCGGGTGGCGGCGCC
CTTTTCGTCGCTGTTCTCGCCCCCTGCGCCGGACGTCCGCTCGTACAACT
CCTGCATCGCGGCGTGCCGTCGTGGCGGTCAGAGCGGCCTCGCCAAACTC
TTCTTCCACGACATGCTGTCCCGGGGACTGAGACCCGACGTCTGGACCTT
CAAGTCCGCGGTATTGGACCGCCTGCAGGCGCAACCACCTACGCCCCCTG
CCCCCGCCGCCGCCGCCGCCGCCGCCGCCACAAAGGCGGGAATACGCCAG
GATCAGGAAATTTCTTCGCGGCCGGATTTTTCTGGCGGCCAGGAGCGTTT
GCCGCCTTCCCGGGCTCCTCAGCAGGCGCGGTCCCCCTGGCGGGCGTTGC
TGGTGCTCCTTGAGGAAGTGGACGGGGAGGGGCTGGGTCCCGACACGCCG
TGCATCAACCTGGCGCTGACGGAGTGCGCGAGGGCCGGGCGCTGGGAGGA
GAGTCGCAACCTCCTAGAAGACCTGAGGGAAGCATCCCCGCCCGGGGGGT
CACTCCGCCCCAGTGTGTCGAGATACAACTCCGTGCTCAGGACGCTGCGC
AACGCGCCTGCACGCGACCGCCGAACAACCTTCGGCGCTCCTGCTACTCC
ACCGCTGGGTGGGGAGATCACGCCGGCAGGAGGAGACGACAGTAGGGTCG
ACGGAGATTCCGTATATCTGGAGGCGGCGGGCGGGAGGTGGTCGGGGGCG
GAGGGTTGGGCGGAGGGTCACGTGTTCGGCTTCCTCGAAGACATGCGGGC
TGCGGGGGTGACGCCGGACAGGGATACCTACCAGTGCGCCATCCGCTGTG
CCACCGACGCCGCTCTGTTGGACATCGCCAAGGCCGAAAAGGCGGCGGAG
GAGGAGGAGGCGGTGGGGAAGGGCGGGACGGTAGCCAGGGGCAGTGACGA
GGGCGCCCTTAGCCGTGGTGGTGGTGGTGGCATCGTGGTGGATGTCGACC
CTATGAGATAG
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