prot_Ecto-sp13_S_contig1787.5438.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig1787.5438.1
Unique Nameprot_Ecto-sp13_S_contig1787.5438.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length904
Homology
BLAST of mRNA_Ecto-sp13_S_contig1787.5438.1 vs. uniprot
Match: D8LDQ4_ECTSI (DEAD box helicase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LDQ4_ECTSI)

HSP 1 Score: 1072 bits (2773), Expect = 0.000e+0
Identity = 670/725 (92.41%), Postives = 672/725 (92.69%), Query Frame = 0
Query:  173 DKPNGTRNGDSGAATHGHTPFPVELMADGEEEGELVFEPKKPATPEASTNGGGGG-DADDGRATVASPESEPAXXXXXXXXXXXXXVNDEEAEEAARFARIAXXXXXXXXXXXXXXXXXXXXXXSPSSGNAQFGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXERGTSERQRQLEEDRRRQKARETEXXXXXXXXXXXXXXXLLREQYLGKKKVKKKIVKPSEKFSKIFQFDWDASEDTSRDANPLYNQRAQLNASFGRGYLAGIDMREQRKDSAFLTALMEKRQEEQRRAEAADHSLTAQDKADRERAREQQMAEVEAFSLAEADGMGDDPVLKGAHWSEKPLAEMAERDWRIFREDFDIRVKGGKAPLPLRFWEEGHLPSSVMEAIRELGYEKPSPIQRQAIPIGMERRDIIGIAETGSGKTAAFGIPMIAYILSLEAGMRDRVADQGPLALIMAPTRELAIQIEEECKKFCKFAGLNTVCVVGGQDIEAQAFTLRKGVEIIIGTPGRLNDCVEKHYLVLNQCNYVVLDEADRMIDMGFEDQVLAVLEAMGGTLKADDAELAYKQEKKAKQARSAADLVRVTAMFSATMPAAVEKMAKKYLRHPAIVQQIGDEDTGKNRRIEQRVLWMTEAQKKAKVTELLRGHDKEDRVLVFINTKKSADMLGRQLEQAGFSTGVLHGGKTQ 896
            DKPNGTRNGDSGAATHGHTPFPVELMADGEEEGELVFEPKKP TPEA TNGG    DADDGRATVASPESEPAXXXXXXXXXXXXX NDEEAEEAARFARIAXXXXXXXXXXXXXXXXXXXXXX PSSGNAQFGXXXXXXXXXXXXX                                 XXXXXXXXXXXXXXX        ERGTSERQRQLEEDRRRQKARET XXXXXXXXXXXXXXXLLREQYLGKKKVKKKIVKPSEKFSKIFQFDWDASEDTSRDANPLYN+RAQLNASFGRGYLAGIDMREQRK+SAFLTALMEKRQEEQRRAEAADHSLTAQDKADRERAREQQMAEVEAFSLAEADGMGDDPVLKGAHWSEKPLAEMAERDWRIFREDFDIRVKGGKAPLPLRFWEEGHLPSSVMEAIRELGYEKPSPIQRQAIPIGMERRDIIGIAETGSGKTAAFGIPMIAYILSLEAGMRDRVADQGPLALIMAPTRELAIQIEEECKKFCKFAGLNTVCVVGGQDIEAQAFTLRKGVEIIIGTPGRLNDCVEKHYLVLNQCNYVVLDEADRMIDMGFEDQVLAVLEAMGGTLKADDAELAYKQEKKAKQARSAADLVRVTAMFSATMPAAVEKMAKKYLRHPAIVQ IGDEDTGKNRRIEQRVLWMTEAQKK KVTELLRGHDKEDRVLVFINTKKSADMLGRQLEQAGF TGVLHGGKTQ
Sbjct:  172 DKPNGTRNGDSGAATHGHTPFPVELMADGEEEGELVFEPKKPTTPEAPTNGGXXXXDADDGRATVASPESEPAXXXXXXXXXXXXXXNDEEAEEAARFARIAXXXXXXXXXXXXXXXXXXXXXXXPSSGNAQFGXXXXXXXXXXXXXVVAGGMGAPEPPPGKLAFKTKKQREQEALQRLEXXXXXXXXXXXXXXX--------ERGTSERQRQLEEDRRRQKARETXXXXXXXXXXXXXXXXLLREQYLGKKKVKKKIVKPSEKFSKIFQFDWDASEDTSRDANPLYNERAQLNASFGRGYLAGIDMREQRKESAFLTALMEKRQEEQRRAEAADHSLTAQDKADRERAREQQMAEVEAFSLAEADGMGDDPVLKGAHWSEKPLAEMAERDWRIFREDFDIRVKGGKAPLPLRFWEEGHLPSSVMEAIRELGYEKPSPIQRQAIPIGMERRDIIGIAETGSGKTAAFGIPMIAYILSLEAGMRDRVADQGPLALIMAPTRELAIQIEEECKKFCKFAGLNTVCVVGGQDIEAQAFTLRKGVEIIIGTPGRLNDCVEKHYLVLNQCNYVVLDEADRMIDMGFEDQVLAVLEAMGGTLKADDAELAYKQEKKAKQARSAADLVRVTAMFSATMPAAVEKMAKKYLRHPAIVQ-IGDEDTGKNRRIEQRVLWMTEAQKKTKVTELLRGHDKEDRVLVFINTKKSADMLGRQLEQAGFPTGVLHGGKTQ 887          
BLAST of mRNA_Ecto-sp13_S_contig1787.5438.1 vs. uniprot
Match: A0A6H5KZB6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KZB6_9PHAE)

HSP 1 Score: 1002 bits (2591), Expect = 0.000e+0
Identity = 628/731 (85.91%), Postives = 632/731 (86.46%), Query Frame = 0
Query:  168 ATAGHDKPNGTRNGDSGAATHGHTPFPVELMADGEEEGELVFEPKKPATPEASTNGGGGGDADDGRATVASPESEPAXXXXXXXXXXXXX------------------VNDEEAEEAARFARIAXXXXXXXXXXXXXXXXXXXXXXSPSSGNAQFGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXERGTSERQRQLEEDRRRQKARETEXXXXXXXXXXXXXXXLLREQYLGKKKVKKKIVKPSEKFSKIFQFDWDASEDTSRDANPLYNQRAQLNASFGRGYLAGIDMREQRKDSAFLTALMEKRQEEQRRAEAADHSLTAQDKADRERAREQQMAEVEAFSLAEADGMGDDPVLKGAHWSEKPLAEMAERDWRIFREDFDIRVKGGKAPLPLRFWEEGHLPSSVMEAIRELGYEKPSPIQRQAIPIGMERRDIIGIAETGSGKTAAFGIPMIAYILSLEAGMRDRVADQGPLALIMAPTRELAIQ------------------IEEECKKFCKFAGLNTVCVVGGQDIEAQAFTLRKGVEIIIGTPGRLNDCVEKHYLVLNQCNYVVLDEADRMIDMGFEDQVLAVLEAMGGTLKADDAELAYKQEKKAKQARSAADLVRVTAMFSATMPAAVEKMAKKYLRHPAIVQQIGDEDTGKNRRIEQRVLWMTEAQKKAKVTELLRGHDKEDR 862
            A AGHDKP GTRNGDSGAATHG TPFPVELMADGEEEGELVFEPKKPATPEASTNGGG GDADDGRATVASPESEPA XXXXXXXXXXXX                  VNDEEAEEAARFARIA     XX        XXXXXXX PSSGNA FG XXXXXXXXXXXX                                    XXXXXXXXXXXXXXX     ERGTSERQRQLEEDRRRQKARETEXXXXXXXXXXXXXXXLLREQYLGKKKVKKKIVKPSEKFSKIFQFDWDASEDTSRDANPLYNQRAQLNASFGRGYLAGIDMREQRKDSAFLTALMEKRQEEQRRAEAADHSLTAQDKADRERAREQQMAEVEAFSLAEADGMGDDPVLKGAHWSEKPLAEMAERDWRIFREDFDIRVKGGKAPLPLRFWEEG+LPSSVMEAIRELGYEKPSPIQRQAIPIGMERRDIIGIAETGSGKTAAFGIPMIAYILSLEAGMRDRVADQGPLALIMAPTRELAIQ                  IEEECKKFCKFAGLNTVCVVGGQDIEAQAFTLRKGVEIIIGTPGRLNDCVEKHYLVLNQCNYVVLDEADRMIDMGFEDQVLAVLEAMGGTLKADDAELAYKQEKKAKQARSAADLVRVTAMFSATMPAAVE+MAKKYLRHPAIVQ IGDEDTGKNRRIEQRVLW+TEAQKKAKVTELLRGHDK+DR
Sbjct:  164 AAAGHDKPKGTRNGDSGAATHGQTPFPVELMADGEEEGELVFEPKKPATPEASTNGGGRGDADDGRATVASPESEPAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVNDEEAEEAARFARIAARAEEXXAERVKARAXXXXXXXXPSSGNAHFGGXXXXXXXXXXXXARGVVVGGMGAPEPPPGKLAFKTKKQREQEALQRLEXXXXXXXXXXXXXXX-----ERGTSERQRQLEEDRRRQKARETEXXXXXXXXXXXXXXXLLREQYLGKKKVKKKIVKPSEKFSKIFQFDWDASEDTSRDANPLYNQRAQLNASFGRGYLAGIDMREQRKDSAFLTALMEKRQEEQRRAEAADHSLTAQDKADRERAREQQMAEVEAFSLAEADGMGDDPVLKGAHWSEKPLAEMAERDWRIFREDFDIRVKGGKAPLPLRFWEEGNLPSSVMEAIRELGYEKPSPIQRQAIPIGMERRDIIGIAETGSGKTAAFGIPMIAYILSLEAGMRDRVADQGPLALIMAPTRELAIQQPLQCSHFLALFPPPSHQIEEECKKFCKFAGLNTVCVVGGQDIEAQAFTLRKGVEIIIGTPGRLNDCVEKHYLVLNQCNYVVLDEADRMIDMGFEDQVLAVLEAMGGTLKADDAELAYKQEKKAKQARSAADLVRVTAMFSATMPAAVERMAKKYLRHPAIVQ-IGDEDTGKNRRIEQRVLWLTEAQKKAKVTELLRGHDKDDR 888          
BLAST of mRNA_Ecto-sp13_S_contig1787.5438.1 vs. uniprot
Match: A0A835YKD8_9STRA (Putative DEAD box helicase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YKD8_9STRA)

HSP 1 Score: 635 bits (1638), Expect = 2.540e-213
Identity = 333/486 (68.52%), Postives = 397/486 (81.69%), Query Frame = 0
Query:  414 LLREQYLGKKKVKKKIVKPSEKFSKIFQFDWDASEDTSRDANPLYNQRAQLNASFGRGYLAGIDMREQRKDSAFLTALMEKRQEEQRRAEAADHSLTAQDKADRERAREQQMAEVEAFSLAEADGMGDDPV-LKGAHWSEKPLAEMAERDWRIFREDFDIRVKGGKAPLPLRFWEEGHLPSSVMEAIRELGYEKPSPIQRQAIPIGMERRDIIGIAETGSGKTAAFGIPMIAYILSLEAGMRDRVADQGPLALIMAPTRELAIQIEEECKKFCKFAGLNTVCVVGGQDIEAQAFTLRKGVEIIIGTPGRLNDCVEKHYLVLNQCNYVVLDEADRMIDMGFEDQVLAVLEAMGGTLKADDAELAYKQEKKAKQARSAADLVRVTAMFSATMPAAVEKMAKKYLRHPAIVQQIGDEDTGKNRRIEQRVLWMTEAQKKAKVTELLRGHDKEDRVLVFINTKKSADMLGRQLEQAGFS--TGVLHGGKTQ 896
            ++R+ YLG +K  K++VK ++KF  +FQFDW+A +DTS+D NPLY Q+AQ+NA +GRGY+AGIDMREQRKDSAFL ALM KRQEEQRR E  +  L+  D+ DRERAR +++      +  EA G     + L+GAHWSEKPL+EMAERDWRIFREDFDIRVKGGKAPLPLR WEEG L +++MEAI ELGY++PSPIQRQAIPIG++ RD+IGIAETGSGKTAAF IPM++YI+SL     +R  D GPLA++MAPTRELA QIEEECKKF KF GL T CVVGGQDIEAQ F LR+GVEI+IGTPGRLNDC+EKHYLVLNQC YVVLDEADRMID+GFE+QVLAVL+ MGG LK+ D   A +QE+ AK    A   VRVT+MFSATMP AVE+MAKKYLRHPAIVQ IGDEDTGKN+RI Q VL+M+EAQKKAK+ E LR    +++ L+F+NTKK+AD+L RQLEQ+GF+   GVLHGGKTQ
Sbjct:  209 MIRKSYLGGQKNTKRVVKAADKFKAVFQFDWEAGDDTSQDYNPLYQQKAQINALYGRGYIAGIDMREQRKDSAFLNALMAKRQEEQRRLEL-EQGLSEADRRDRERARARELQRARQQAATEAVGSERASIGLRGAHWSEKPLSEMAERDWRIFREDFDIRVKGGKAPLPLRNWEEGKLAATIMEAIEELGYKEPSPIQRQAIPIGLQFRDLIGIAETGSGKTAAFCIPMLSYIMSLPPERIERTPDDGPLAIVMAPTRELAQQIEEECKKFAKFTGLRTACVVGGQDIEAQGFELRRGVEIVIGTPGRLNDCLEKHYLVLNQCTYVVLDEADRMIDLGFEEQVLAVLDGMGGALKSTDETEALQQEEDAKSGSGA---VRVTSMFSATMPTAVERMAKKYLRHPAIVQ-IGDEDTGKNKRITQHVLFMSEAQKKAKLQEQLRSLKGDNKALIFVNTKKTADLLARQLEQSGFTGQVGVLHGGKTQ 689          
BLAST of mRNA_Ecto-sp13_S_contig1787.5438.1 vs. uniprot
Match: A0A7S3H980_9STRA (Hypothetical protein n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3H980_9STRA)

HSP 1 Score: 563 bits (1452), Expect = 5.120e-187
Identity = 297/484 (61.36%), Postives = 365/484 (75.41%), Query Frame = 0
Query:  415 LREQYLGKKKVKKKIVKPSEKFSKIFQFDWDASEDTSR-DANPLYNQRAQLNASFGRGYLAGIDMREQRKDSAFLTALMEKRQEEQRRAEAADHSLTAQDKADRERAREQQMAEVEAFSLAEADGMGDDPVLK-GAHWSEKPLAEMAERDWRIFREDFDIRVKGGKAPLPLRFWEEGHLPSSVMEAIRELGYEKPSPIQRQAIPIGMERRDIIGIAETGSGKTAAFGIPMIAYILSLEAGMRDRVADQGPLALIMAPTRELAIQIEEECKKFCKFAGLNTVCVVGGQDIEAQAFTLRKGVEIIIGTPGRLNDCVEKHYLVLNQCNYVVLDEADRMIDMGFEDQVLAVLEAMGGTLKADDAELAYKQEKKAKQARSAADLVRVTAMFSATMPAAVEKMAKKYLRHPAIVQQIGDEDTGKNRRIEQRVLWMTEAQKKAKVTELLRGHDKEDRVLVFINTKKSADMLGRQLEQAGFSTGVLHGGKTQ 896
            + E YLG  + KK+I KPS+KF+KIFQFDW+ ++DTSR D NPLYN R ++NA FGRGY+AG+D +EQRKDS FL +L EKR  E  R E     LT + K +R RARE+   E +   + E   +      K G+HWSEK LA+M ERDWRIFREDFDIR++GG+A LPLRFW E + P +V++AI   GYEKPSPIQRQA+PIG+  RDIIGIAETGSGKT AF +P++ Y+L L     DRV  QGPLA+IMAPTRELA QIEEEC K  KF    TV VVGGQ I+ Q FTLR GVEI+IGTPGR+ DC+E +YLVLNQCNYVVLDEADRMIDMGFE QV+AVLEAMGG LK +D E A  Q K+ + A +A  + RVTAMFSATMP AVE++A+ +LRHP +V+ IGDED+GKN+RIEQRVL++ EAQKK+KV E LR     D+V+VF+N+KK  D LGR L+  G+ +G+LHGG++Q
Sbjct:   94 IHEHYLGGGEKKKRITKPSDKFAKIFQFDWEETDDTSRNDVNPLYNNRVKINALFGRGYIAGVDQKEQRKDSNFLMSLSEKRINEANRYEDTSEILTEEQKRERARAREEAAQEFKRRRIQELSSLDKQVDSKMGSHWSEKALADMTERDWRIFREDFDIRIQGGRATLPLRFWNEANFPPAVVKAIEAAGYEKPSPIQRQAVPIGLSGRDIIGIAETGSGKTCAFLLPLVCYLLRLPKEYIDRVQAQGPLAVIMAPTRELAQQIEEECIKLLKFTNFRTVSVVGGQSIQDQGFTLRNGVEIVIGTPGRMLDCIENNYLVLNQCNYVVLDEADRMIDMGFEPQVVAVLEAMGGLLKDEDEEQAELQLKQNEGAETAKQIFRVTAMFSATMPPAVEQIARTFLRHPVLVR-IGDEDSGKNKRIEQRVLFVPEAQKKSKVVEELRRMASSDKVIVFVNSKKQGDNLGRHLDTLGYHSGILHGGRSQ 576          
BLAST of mRNA_Ecto-sp13_S_contig1787.5438.1 vs. uniprot
Match: A0A7S2SDZ3_9STRA (Hypothetical protein (Fragment) n=2 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SDZ3_9STRA)

HSP 1 Score: 553 bits (1424), Expect = 6.190e-183
Identity = 294/484 (60.74%), Postives = 365/484 (75.41%), Query Frame = 0
Query:  414 LLREQYLGKKKVKKKIVKPSEKFSKIFQFDWDASEDTSRDANPLYNQRAQLNASFGRGYLAGIDMREQRKDSAFLTALMEKRQEEQRRAEAADHSLTAQDKADRERAREQQMAEVEAFSLAEADGMGDDPV-LKGAHWSEKPLAEMAERDWRIFREDFDIRVKGGKAPLPLRFWEEGHLPSSVMEAIRELGYEKPSPIQRQAIPIGMERRDIIGIAETGSGKTAAFGIPMIAYILSLEAGMRDRVADQGPLALIMAPTRELAIQIEEECKKFCKFAGLNTVCVVGGQDIEAQAFTLRKGVEIIIGTPGRLNDCVEKHYLVLNQCNYVVLDEADRMIDMGFEDQVLAVLEAMGGTLKADDAELAYKQEKKAKQARSAADLVRVTAMFSATMPAAVEKMAKKYLRHPAIVQQIGDEDTGKNRRIEQRVLWMTEAQKKAKVTELLRGHDKEDRVLVFINTKKSADMLGRQLEQAGFSTGVLHGGKTQ 896
            ++REQYLGKK  KK+I KPSEKF+KIFQFDW+A EDTS+D NP+YN R  +N  FGRGY+AG+D++EQRK ++F  AL+EKRQEE+R+AE  D SL+  D  +RERAR +  A+++    A A  +    + LKG HW EK + +M ERDWRIFREDFDI V+GG++ LPLR WEE  +P  V+ A+ +L Y +PSPIQRQAIPIG+E RDIIGIAETGSGKT AF +PM++YIL+L A  R+R+AD+GPLALIMAPTRELA QIE E ++ C      TV VVGGQ IE Q F LRKGVEI+IGTPGRL D +E  YLVLNQ NYVVLDEADRMIDMGFE  +  VLE+MGG LK++  E AYKQE++AK+      L RVTAMFSATMPA VE++A+ YLRHPAIV  IGD D+GKN RI Q+V  + EAQK +++ +  R    ED+++VF+N KK  DM+ R LE+AG    +LHGGKTQ
Sbjct:  175 VIREQYLGKKVQKKRIAKPSEKFAKIFQFDWEAGEDTSQDLNPIYNDRMGINPLFGRGYIAGMDLQEQRKTNSFNRALVEKRQEEERKAELLDQSLSKNDLRERERARRKVAADLKDLEEARAARLEKTSIGLKGKHWKEKRVEDMNERDWRIFREDFDIMVRGGRSALPLRSWEESSIPELVLRAVHDLKYVEPSPIQRQAIPIGLEWRDIIGIAETGSGKTCAFVVPMLSYILNLPAYRRERLADEGPLALIMAPTRELAQQIEAETRRLCAHLDYKTVSVVGGQSIEDQGFHLRKGVEIVIGTPGRLKDALESRYLVLNQANYVVLDEADRMIDMGFEQDLNFVLESMGGLLKSEAEEEAYKQEEQAKRGEV---LYRVTAMFSATMPAEVERIARTYLRHPAIVS-IGDRDSGKNMRILQQVTMVPEAQKSSRLLQEARPSSSEDKIIVFVNEKKRCDMVARALEKAGVRCSILHGGKTQ 654          
BLAST of mRNA_Ecto-sp13_S_contig1787.5438.1 vs. uniprot
Match: A0A8K1C394_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1C394_PYTOL)

HSP 1 Score: 528 bits (1359), Expect = 2.410e-171
Identity = 292/509 (57.37%), Postives = 372/509 (73.08%), Query Frame = 0
Query:  415 LREQYLGKKKVKKKIVKPSEKFSKIFQFDWDASEDTSRDANPLYNQRAQLNASFGRGYLAGIDMREQRKDSAFLTALMEKRQEEQRRAEAADHSLTAQDKADRERAREQQMAEVEAFSLAEADGMGD----DPVLKGAHWSEKPLAEMAERDWRIFREDFDIRVKGGKAPLPLRFWEEG-HLPSSVMEAIRELGYEKPSPIQRQAIPIGMERRDIIGIAETGSGKTAAFGIPMIAYILSLEAGMRDRVADQGPLALIMAPTRELAIQIEEECKKFCKFAG---------LNTVCVVGGQDIEAQAFTLRKGVEIIIGTPGRLNDCVEKHYLVLNQCNYVVLDEADRMIDMGFEDQVLAVLEAMGGTLKADDAELAYKQEKKAKQARSAAD-LVRVTAMFSATMPAAVEKMAKKYLRHPAIVQQIGDEDTGKNRRIEQRVLWMTEAQKKAKVTELL--------RGHD----KEDRVLVFINTKKSADMLGRQLEQAGFSTGVLHGGKTQ 896
            +++QYLGKK  KKK+VK SEKF+KIFQFDW+A+EDTS D NPLY +R  +N  +GRGY AG+DMREQRK ++FL  L EKRQ EQR  +  +  L+ ++   R+R RE+ +  ++     E D M D    +    G HWSEKPLA+M ERDWRIFREDFDI +KGG+AP PLR WEE   +P +V +AIRELG+E+PSPIQ Q IPIG+ERRD+IGIAETGSGKTAAF IP+IAY+ SL A M  R  +QGPLAL+MAPTRELA+QIE+E  K CK+           + T+ VVGGQ IE QAF LR+G++IIIGTPGRL DC+E HYLVLNQCNYV+LDEADRMIDMGFE QV+AVLE MG  LK+++ E   + E++   A +  D  +RVT MFSATMP  VE++AK +LRHPAIV+ IGDED+GKN+RI+QRVL+M   +K+AK+TELL        R  +    + ++V+VF+N KK  D++ + +   GF T +LHGGK+Q
Sbjct:  206 IKDQYLGKKMQKKKVVKASEKFAKIFQFDWEANEDTSADLNPLYAKRLDVNLLYGRGYRAGVDMREQRKHNSFLNELAEKRQREQRLLDETNGELSKEEVDARQRERERTLRSMQE---REKDLMRDMVEREARTMGTHWSEKPLADMKERDWRIFREDFDITIKGGRAPNPLRKWEEALGVPEAVFQAIRELGFERPSPIQMQGIPIGLERRDVIGIAETGSGKTAAFVIPLIAYLYSLPATMIARTNEQGPLALVMAPTRELALQIEQEAMKLCKYTQVGLPEKQHPIRTLSVVGGQSIEDQAFKLREGIDIIIGTPGRLMDCLENHYLVLNQCNYVILDEADRMIDMGFEPQVVAVLENMGSLLKSENEE---EMEQQLTVAGAGKDHRLRVTTMFSATMPPEVERLAKTFLRHPAIVK-IGDEDSGKNKRIDQRVLFMNAGKKRAKLTELLTSILRNQPRSRNVKVTESNKVIVFVNIKKECDVVAKFVSNEGFRTTILHGGKSQ 707          
BLAST of mRNA_Ecto-sp13_S_contig1787.5438.1 vs. uniprot
Match: A0A5D6XJ01_9STRA (Uncharacterized protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XJ01_9STRA)

HSP 1 Score: 521 bits (1341), Expect = 1.750e-169
Identity = 288/515 (55.92%), Postives = 366/515 (71.07%), Query Frame = 0
Query:  415 LREQYLGKKKVKKKIVKPSEKFSKIFQFDWDASEDTSRDANPLYNQRAQLNASFGRGYLAGIDMREQRKDSAFLTALMEKRQEEQRRAEAADHSLTAQDKADRERAREQQMAEVE--------AFSLAEADGMGDDPVLKGAHWSEKPLAEMAERDWRIFREDFDIRVKGGKAPLPLRFWEEGH--LPSSVMEAIRELGYEKPSPIQRQAIPIGMERRDIIGIAETGSGKTAAFGIPMIAYILSLEAGMRDRVADQGPLALIMAPTRELAIQIEEECKKFCKFA-----------GLNTVCVVGGQDIEAQAFTLRKGVEIIIGTPGRLNDCVEKHYLVLNQCNYVVLDEADRMIDMGFEDQVLAVLEAMGGTLKADDAELAYKQEKKAKQARSAADLVRVTAMFSATMPAAVEKMAKKYLRHPAIVQQIGDEDTGKNRRIEQRVLWMTEAQKKAKVTELLRGHDKED------------RVLVFINTKKSADMLGRQLEQAGFSTGVLHGGKTQ 896
            +++QYLGKK  KKK VK SEKF+KIF+FDW+A+EDTS D NPLY QR  +N  +GRGY AG+DMREQRK ++FL+ L +KRQ E R A+  + +L+    A+R+RARE+ +  ++        A +  EA  MG        HWSEKPLA+M ERDWRIFREDFDI +KGG+AP PLR W E    LP +V +AI ++G+ +PSPIQ QAIP+G+ERRDIIGIAETGSGKTAAF IP+IAYI +L A    R A+QGPLAL+MAPTRELA+QIE+E  K CK             G+ T+ VVGGQ IE QAF LR+G++++IGTPGRL DC+E HYLVLNQCNYVVLDEADRMIDMGFE QV+AVLE MG  LK+++ E   +Q   A   +      RVT MFSATMP  VE++AK +LRHPAIV+ IGDED+GKN+RI+QRV+++   +KKAK+ ELL G  ++             +++VF+N KK  D++ + L  AGF   VLHGGK+Q
Sbjct:  140 IKDQYLGKKAPKKKAVKTSEKFTKIFKFDWEAAEDTSADLNPLYAQRLDVNLLYGRGYRAGVDMREQRKHNSFLSELSQKRQREHRTADEQNSALSQTQLAERQRARERALRSMQDRAQDAMQALARREAQTMG-------THWSEKPLADMRERDWRIFREDFDITIKGGRAPHPLRAWAEAAPALPQAVFDAIADMGFARPSPIQMQAIPVGLERRDIIGIAETGSGKTAAFVIPIIAYIYALPAANVRRTAEQGPLALVMAPTRELALQIEQEAIKLCKHTRVGGPDPETAHGIKTLAVVGGQSIEDQAFKLREGIDVVIGTPGRLMDCLESHYLVLNQCNYVVLDEADRMIDMGFEPQVVAVLENMGSLLKSENEEEMEQQISLAVAGQE--HRFRVTTMFSATMPVEVERLAKTFLRHPAIVK-IGDEDSGKNKRIDQRVVFLHAGKKKAKLVELLGGILRDQPKSRKEKAADGPKIIVFVNIKKECDVVAKMLAAAGFRITVLHGGKSQ 644          
BLAST of mRNA_Ecto-sp13_S_contig1787.5438.1 vs. uniprot
Match: A0A225WJ30_9STRA (DEAD/DEAH box RNA helicase n=1 Tax=Phytophthora megakarya TaxID=4795 RepID=A0A225WJ30_9STRA)

HSP 1 Score: 521 bits (1341), Expect = 8.340e-169
Identity = 286/513 (55.75%), Postives = 368/513 (71.73%), Query Frame = 0
Query:  415 LREQYLGKKKVKKKIVKPSEKFSKIFQFDWDASEDTSRDANPLYNQRAQLNASFGRGYLAGIDMREQRKDSAFLTALMEKRQEEQRRAEAADHSLTAQDKADRERAREQQMAEVEAFSLAEADGMGD-DPVLKGAHWSEKPLAEMAERDWRIFREDFDIRVKGGKAPLPLRFWEEGH--LPSSVMEAIRELGYEKPSPIQRQAIPIGMERRDIIGIAETGSGKTAAFGIPMIAYILSLEAGMRDRVADQGPLALIMAPTRELAIQIEEECKKFCKFAG---------LNTVCVVGGQDIEAQAFTLRKGVEIIIGTPGRLNDCVEKHYLVLNQCNYVVLDEADRMIDMGFEDQVLAVLEAMGGTLKADDAELAYKQEKKAKQARSAADL---VRVTAMFSATMPAAVEKMAKKYLRHPAIVQQIGDEDTGKNRRIEQRVLWMTEAQKKAKVTELLRG----------HDKEDRV------LVFINTKKSADMLGRQLEQAGFSTGVLHGGKTQ 896
            L++QYLGK   KKK+VK SEKFSKIFQFDW+ASEDTS D NPLY ++  +N  +GRGY AG+DMREQRK+++FL  L  KRQ+EQ+ A+  D +LT +  A R++ RE+ +  ++A        M   +    G HWSEK LA+M ERDWRIFREDFDI +KGG+AP PLR W E    LP +V +AI+++G+E+PSPIQ QAIPIG+++RDIIGIAETGSGKTAAF IP+IAYI SL A M  R  +QGPLAL+MAPTRELA+QIE+E  K CK+           + T+ VVGGQ IE Q F LR+GV+IIIGTPGRL DC+E HYLVLNQCNYVVLDEADRMIDMGFE QV+AVLE MG  LK+++ E   +Q K A  A+   +L   +RVT MFSATMP  VE++AK +LRHP+IV+ IGDED+GKN+RI+QRV++M   +K++K+ ++LR             ++++V      +VF+N KK  D + + +   GF   +LHGGKTQ
Sbjct:  185 LKDQYLGKTVKKKKVVKASEKFSKIFQFDWEASEDTSTDLNPLYAKKMDVNLLYGRGYRAGVDMREQRKNNSFLDELSHKRQKEQQLADETDDNLTTEQVAARQQERERALRNMQARERTRMQEMASREAKTMGTHWSEKALADMKERDWRIFREDFDITLKGGRAPNPLRKWNEAGEMLPDAVFKAIKDMGFERPSPIQMQAIPIGLQKRDIIGIAETGSGKTAAFMIPIIAYIYSLPAAMVARTGEQGPLALVMAPTRELALQIEQEAIKLCKYTSVGLPEKMNPIKTLSVVGGQSIEDQGFRLREGVDIIIGTPGRLMDCLESHYLVLNQCNYVVLDEADRMIDMGFEPQVVAVLENMGSLLKSENEEEMEQQLKLANGAQPGEELQHRLRVTTMFSATMPVEVERLAKTFLRHPSIVK-IGDEDSGKNKRIDQRVMFMNPGKKRSKLVDVLRDILSAQSVSVPRSRKEKVVDGAKIIVFVNIKKECDSVTKFVSSEGFRCTILHGGKTQ 696          
BLAST of mRNA_Ecto-sp13_S_contig1787.5438.1 vs. uniprot
Match: A0A2D4CG39_PYTIN (Uncharacterized protein n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4CG39_PYTIN)

HSP 1 Score: 523 bits (1346), Expect = 9.140e-169
Identity = 290/511 (56.75%), Postives = 371/511 (72.60%), Query Frame = 0
Query:  415 LREQYLGKKKVKKKIVKPSEKFSKIFQFDWDASEDTSRDANPLYNQRAQLNASFGRGYLAGIDMREQRKDSAFLTALMEKRQEEQRRAEAADHSLTAQDKADRERAREQQMAEVEAFS------LAEADGMGDDPVLKGAHWSEKPLAEMAERDWRIFREDFDIRVKGGKAPLPLRFWEEGH-LPSSVMEAIRELGYEKPSPIQRQAIPIGMERRDIIGIAETGSGKTAAFGIPMIAYILSLEAGMRDRVADQGPLALIMAPTRELAIQIEEECKKFCKFAG---------LNTVCVVGGQDIEAQAFTLRKGVEIIIGTPGRLNDCVEKHYLVLNQCNYVVLDEADRMIDMGFEDQVLAVLEAMGGTLKADDAELAYKQEKKAKQARSAAD-LVRVTAMFSATMPAAVEKMAKKYLRHPAIVQQIGDEDTGKNRRIEQRVLWMTEAQKKAKVTELL------RGHDKEDR------VLVFINTKKSADMLGRQLEQAGFSTGVLHGGKTQ 896
            ++++YLGKK  KKK+VK SEKF+KIFQFDW+A EDTS + NPLY +R  +N  FGRGY AG+D+REQRK ++FL  L +KRQ EQR A+  +  LT ++ A RER R++ +  ++A        LAE +         G HWSEK L EM ERDWRIFREDF+I +KGG+AP PLR WEE   LP +V +A++ LG+E+PSPIQ QAIPIG++RRD+IGIAETGSGKTAAF IPMIAY+ +L A M  R  +QGPLAL+MAPTRELA+QIE+E  K CKF           + T+ VVGGQ IE QAF LR+GV+IIIGTPGRL DC+E HYLVLNQCNYVVLDEADRMIDMGFE QV+AVLE MG  LK+++ E   + E++   A +  D  +RVT MFSATMP  VE++AK +LRHPAIV+ IGDED+GKN+RI+QRVL+M  A+KKAK+ ELL      +   +++R      ++VF+N KK  D++ + +   GF + +LHGGK+Q
Sbjct:  257 IKDKYLGKKVQKKKVVKASEKFAKIFQFDWEAGEDTSAELNPLYAKRMDVNLLFGRGYRAGVDLREQRKHNSFLQELAQKRQREQRLADQQNAELTPEEVARRERERQEALRNMQARERDAIRELAEREAQ-----TMGTHWSEKALEEMTERDWRIFREDFEITIKGGRAPKPLRKWEEAQGLPDAVFKAVQALGFERPSPIQMQAIPIGLQRRDVIGIAETGSGKTAAFIIPMIAYLYALPATMIARTGEQGPLALVMAPTRELALQIEQEAIKLCKFTAVGLAEKQHPIRTLSVVGGQSIEDQAFKLRQGVDIIIGTPGRLMDCMENHYLVLNQCNYVVLDEADRMIDMGFEPQVVAVLENMGSLLKSENEE---EMEQQLTLAGAGHDHRLRVTTMFSATMPPEVERLAKTFLRHPAIVK-IGDEDSGKNKRIDQRVLFMNPAKKKAKLMELLGSFLSGQPRSRKERTTDGSKIIVFVNIKKECDVVAKAISAEGFRSTILHGGKSQ 758          
BLAST of mRNA_Ecto-sp13_S_contig1787.5438.1 vs. uniprot
Match: D0N623_PHYIT (DEAD/DEAH box RNA helicase, putative n=3 Tax=Phytophthora TaxID=4783 RepID=D0N623_PHYIT)

HSP 1 Score: 520 bits (1340), Expect = 1.210e-168
Identity = 289/512 (56.45%), Postives = 365/512 (71.29%), Query Frame = 0
Query:  415 LREQYLGKKKVKKKIVKPSEKFSKIFQFDWDASEDTSRDANPLYNQRAQLNASFGRGYLAGIDMREQRKDSAFLTALMEKRQEEQRRAEAADHSLTAQDKADRERAREQQMAEVEAFSLAEADGMGD-DPVLKGAHWSEKPLAEMAERDWRIFREDFDIRVKGGKAPLPLRFWEEGH--LPSSVMEAIRELGYEKPSPIQRQAIPIGMERRDIIGIAETGSGKTAAFGIPMIAYILSLEAGMRDRVADQGPLALIMAPTRELAIQIEEECKKFCKFAG---------LNTVCVVGGQDIEAQAFTLRKGVEIIIGTPGRLNDCVEKHYLVLNQCNYVVLDEADRMIDMGFEDQVLAVLEAMGGTLKADDAELAYKQEKKAKQARSAA--DLVRVTAMFSATMPAAVEKMAKKYLRHPAIVQQIGDEDTGKNRRIEQRVLWMTEAQKKAKVTELLRG----------HDKEDRV------LVFINTKKSADMLGRQLEQAGFSTGVLHGGKTQ 896
            L++QYLGK   KKK++K SEKFSK+FQFDW+ASEDTS D NPLY  R  +N  +GRGY AG+DMREQRK ++FL  L  KRQ+EQ++A+A D SLT++  A R++ RE+ +  ++A        M   +    G HWSEK L EM ERDWRIFREDFDI +KGG+AP PLR W E    LP +V +AI++LG+E+PSPIQ QAIPIG+++RDIIGIAETGSGKTAAF IP+IAYI SL A M  R  +QGPLAL+MAPTRELA+QIE+E  K CK            + T+ VVGGQ IE Q F LR+GVEIIIGTPGRL DC+E HYLVLNQCNYVVLDEADRMIDMGFE QV+AVLE MG  LK+++ E   +Q   A +A+       +RVT MFSATMP  VE++AK +LRHP+IV+ IGDED+GKN+RIEQRV++M   +K++K+ E+LR             ++++V      +VF+N KK  D + + +   GF   +LHGGKTQ
Sbjct:  187 LKDQYLGKTVKKKKVIKASEKFSKVFQFDWEASEDTSADLNPLYAHRMDVNLLYGRGYRAGVDMREQRKQNSFLEELSHKRQKEQQQADATDGSLTSEQIAARQQERERALRNMQARERDRIQEMASREAKTMGTHWSEKSLDEMKERDWRIFREDFDITLKGGRAPHPLRKWSEAGKMLPDAVYKAIKDLGFERPSPIQMQAIPIGLQKRDIIGIAETGSGKTAAFVIPIIAYIYSLPATMVARTGEQGPLALVMAPTRELALQIEQEAIKLCKHTSVGLPEKMNPIKTLSVVGGQSIEDQGFRLREGVEIIIGTPGRLMDCLESHYLVLNQCNYVVLDEADRMIDMGFEPQVVAVLENMGSLLKSENEEEMEQQLTLANRAQLGEFQHRLRVTTMFSATMPVEVERLAKTFLRHPSIVK-IGDEDSGKNKRIEQRVMFMNPGKKRSKLVEVLRDILSAQNVPVPRSRKEKVVDGAKIIVFVNIKKECDSVAKFISSEGFRCTILHGGKTQ 697          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig1787.5438.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LDQ4_ECTSI0.000e+092.41DEAD box helicase n=1 Tax=Ectocarpus siliculosus T... [more]
A0A6H5KZB6_9PHAE0.000e+085.91Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A835YKD8_9STRA2.540e-21368.52Putative DEAD box helicase n=1 Tax=Tribonema minus... [more]
A0A7S3H980_9STRA5.120e-18761.36Hypothetical protein n=1 Tax=Spumella elongata Tax... [more]
A0A7S2SDZ3_9STRA6.190e-18360.74Hypothetical protein (Fragment) n=2 Tax=Rhizochrom... [more]
A0A8K1C394_PYTOL2.410e-17157.37Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
A0A5D6XJ01_9STRA1.750e-16955.92Uncharacterized protein n=1 Tax=Pythium brassicum ... [more]
A0A225WJ30_9STRA8.340e-16955.75DEAD/DEAH box RNA helicase n=1 Tax=Phytophthora me... [more]
A0A2D4CG39_PYTIN9.140e-16956.75Uncharacterized protein n=1 Tax=Pythium insidiosum... [more]
D0N623_PHYIT1.210e-16856.45DEAD/DEAH box RNA helicase, putative n=3 Tax=Phyto... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 259..279
NoneNo IPR availableCOILSCoilCoilcoord: 341..375
NoneNo IPR availableCOILSCoilCoilcoord: 385..417
NoneNo IPR availableGENE3D3.40.50.300coord: 822..898
e-value: 1.0E-12
score: 49.6
NoneNo IPR availableGENE3D3.40.50.300coord: 546..821
e-value: 1.2E-84
score: 285.5
NoneNo IPR availablePANTHERPTHR24031:SF23ATP-DEPENDENT RNA HELICASE DDX23-RELATEDcoord: 418..897
NoneNo IPR availablePANTHERPTHR24031RNA HELICASEcoord: 418..897
IPR014001Helicase superfamily 1/2, ATP-binding domainSMARTSM00487ultradead3coord: 603..837
e-value: 1.9E-57
score: 206.9
IPR014001Helicase superfamily 1/2, ATP-binding domainPROSITEPS51192HELICASE_ATP_BIND_1coord: 615..820
score: 28.334
IPR011545DEAD/DEAH box helicase domainPFAMPF00270DEADcoord: 609..808
e-value: 1.8E-47
score: 161.4
IPR000629ATP-dependent RNA helicase DEAD-box, conserved sitePROSITEPS00039DEAD_ATP_HELICASEcoord: 740..748
IPR014014RNA helicase, DEAD-box type, Q motifPROSITEPS51195Q_MOTIFcoord: 584..612
score: 11.369
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 797..896
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 567..820

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig1787contigEcto-sp13_S_contig1787:463..5090 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig1787.5438.1mRNA_Ecto-sp13_S_contig1787.5438.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig1787 463..5090 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig1787.5438.1 ID=prot_Ecto-sp13_S_contig1787.5438.1|Name=mRNA_Ecto-sp13_S_contig1787.5438.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=904bp
MSRTDEGQEDSDRRSSSHKSSHKSSRSSKHSSSRDKGESSSSRKRDRSEH
DHRSSGSNFKERSKDRSSRDSGGDDGEQRSGKRHRRGEDEKDGGGGGGGS
SSRSKSSSSSSHHKSKHRDKDGKSSSSSSKHKKESRSGKDKDRRKHSSKS
KGDEGRTSNGGGAGGGGATAGHDKPNGTRNGDSGAATHGHTPFPVELMAD
GEEEGELVFEPKKPATPEASTNGGGGGDADDGRATVASPESEPAAAEAPA
PAPAPAPVNDEEAEEAARFARIAARAEERAAERAKARAAAAAAAASPSSG
NAQFGGGGGGGGGGGGGGADAAAARGVVGGGMGAPEPPPGKLAFKTKKQR
EQEALQRLEEQRKSKRREQEAAAAERGTSERQRQLEEDRRRQKARETERE
EARAQREKEKERELLREQYLGKKKVKKKIVKPSEKFSKIFQFDWDASEDT
SRDANPLYNQRAQLNASFGRGYLAGIDMREQRKDSAFLTALMEKRQEEQR
RAEAADHSLTAQDKADRERAREQQMAEVEAFSLAEADGMGDDPVLKGAHW
SEKPLAEMAERDWRIFREDFDIRVKGGKAPLPLRFWEEGHLPSSVMEAIR
ELGYEKPSPIQRQAIPIGMERRDIIGIAETGSGKTAAFGIPMIAYILSLE
AGMRDRVADQGPLALIMAPTRELAIQIEEECKKFCKFAGLNTVCVVGGQD
IEAQAFTLRKGVEIIIGTPGRLNDCVEKHYLVLNQCNYVVLDEADRMIDM
GFEDQVLAVLEAMGGTLKADDAELAYKQEKKAKQARSAADLVRVTAMFSA
TMPAAVEKMAKKYLRHPAIVQQIGDEDTGKNRRIEQRVLWMTEAQKKAKV
TELLRGHDKEDRVLVFINTKKSADMLGRQLEQAGFSTGVLHGGKTQASIY
VCV*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR014001Helicase_ATP-bd
IPR011545DEAD/DEAH_box_helicase_dom
IPR000629RNA-helicase_DEAD-box_CS
IPR014014RNA_helicase_DEAD_Q_motif
IPR027417P-loop_NTPase