mRNA_Ecto-sp13_S_contig1787.5438.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp13_S_contig1787.5438.1
Unique NamemRNA_Ecto-sp13_S_contig1787.5438.1
TypemRNA
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Homology
BLAST of mRNA_Ecto-sp13_S_contig1787.5438.1 vs. uniprot
Match: D8LDQ4_ECTSI (DEAD box helicase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LDQ4_ECTSI)

HSP 1 Score: 1072 bits (2773), Expect = 0.000e+0
Identity = 670/725 (92.41%), Postives = 672/725 (92.69%), Query Frame = 1
Query:  517 DKPNGTRNGDSGAATHGHTPFPVELMADGEEEGELVFEPKKPATPEASTNGGGGG-DADDGRATVASPESEPAXXXXXXXXXXXXXVNDEEAEEAARFARIAXXXXXXXXXXXXXXXXXXXXXXSPSSGNAQFGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXERGTSERQRQLEEDRRRQKARETEXXXXXXXXXXXXXXXLLREQYLGKKKVKKKIVKPSEKFSKIFQFDWDASEDTSRDANPLYNQRAQLNASFGRGYLAGIDMREQRKDSAFLTALMEKRQEEQRRAEAADHSLTAQDKADRERAREQQMAEVEAFSLAEADGMGDDPVLKGAHWSEKPLAEMAERDWRIFREDFDIRVKGGKAPLPLRFWEEGHLPSSVMEAIRELGYEKPSPIQRQAIPIGMERRDIIGIAETGSGKTAAFGIPMIAYILSLEAGMRDRVADQGPLALIMAPTRELAIQIEEECKKFCKFAGLNTVCVVGGQDIEAQAFTLRKGVEIIIGTPGRLNDCVEKHYLVLNQCNYVVLDEADRMIDMGFEDQVLAVLEAMGGTLKADDAELAYKQEKKAKQARSAADLVRVTAMFSATMPAAVEKMAKKYLRHPAIVQQIGDEDTGKNRRIEQRVLWMTEAQKKAKVTELLRGHDKEDRVLVFINTKKSADMLGRQLEQAGFSTGVLHGGKTQ 2688
            DKPNGTRNGDSGAATHGHTPFPVELMADGEEEGELVFEPKKP TPEA TNGG    DADDGRATVASPESEPAXXXXXXXXXXXXX NDEEAEEAARFARIAXXXXXXXXXXXXXXXXXXXXXX PSSGNAQFGXXXXXXXXXXXXX                                 XXXXXXXXXXXXXXX        ERGTSERQRQLEEDRRRQKARET XXXXXXXXXXXXXXXLLREQYLGKKKVKKKIVKPSEKFSKIFQFDWDASEDTSRDANPLYN+RAQLNASFGRGYLAGIDMREQRK+SAFLTALMEKRQEEQRRAEAADHSLTAQDKADRERAREQQMAEVEAFSLAEADGMGDDPVLKGAHWSEKPLAEMAERDWRIFREDFDIRVKGGKAPLPLRFWEEGHLPSSVMEAIRELGYEKPSPIQRQAIPIGMERRDIIGIAETGSGKTAAFGIPMIAYILSLEAGMRDRVADQGPLALIMAPTRELAIQIEEECKKFCKFAGLNTVCVVGGQDIEAQAFTLRKGVEIIIGTPGRLNDCVEKHYLVLNQCNYVVLDEADRMIDMGFEDQVLAVLEAMGGTLKADDAELAYKQEKKAKQARSAADLVRVTAMFSATMPAAVEKMAKKYLRHPAIVQ IGDEDTGKNRRIEQRVLWMTEAQKK KVTELLRGHDKEDRVLVFINTKKSADMLGRQLEQAGF TGVLHGGKTQ
Sbjct:  172 DKPNGTRNGDSGAATHGHTPFPVELMADGEEEGELVFEPKKPTTPEAPTNGGXXXXDADDGRATVASPESEPAXXXXXXXXXXXXXXNDEEAEEAARFARIAXXXXXXXXXXXXXXXXXXXXXXXPSSGNAQFGXXXXXXXXXXXXXVVAGGMGAPEPPPGKLAFKTKKQREQEALQRLEXXXXXXXXXXXXXXX--------ERGTSERQRQLEEDRRRQKARETXXXXXXXXXXXXXXXXLLREQYLGKKKVKKKIVKPSEKFSKIFQFDWDASEDTSRDANPLYNERAQLNASFGRGYLAGIDMREQRKESAFLTALMEKRQEEQRRAEAADHSLTAQDKADRERAREQQMAEVEAFSLAEADGMGDDPVLKGAHWSEKPLAEMAERDWRIFREDFDIRVKGGKAPLPLRFWEEGHLPSSVMEAIRELGYEKPSPIQRQAIPIGMERRDIIGIAETGSGKTAAFGIPMIAYILSLEAGMRDRVADQGPLALIMAPTRELAIQIEEECKKFCKFAGLNTVCVVGGQDIEAQAFTLRKGVEIIIGTPGRLNDCVEKHYLVLNQCNYVVLDEADRMIDMGFEDQVLAVLEAMGGTLKADDAELAYKQEKKAKQARSAADLVRVTAMFSATMPAAVEKMAKKYLRHPAIVQ-IGDEDTGKNRRIEQRVLWMTEAQKKTKVTELLRGHDKEDRVLVFINTKKSADMLGRQLEQAGFPTGVLHGGKTQ 887          
BLAST of mRNA_Ecto-sp13_S_contig1787.5438.1 vs. uniprot
Match: A0A6H5KZB6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KZB6_9PHAE)

HSP 1 Score: 1002 bits (2591), Expect = 0.000e+0
Identity = 628/731 (85.91%), Postives = 632/731 (86.46%), Query Frame = 1
Query:  502 ATAGHDKPNGTRNGDSGAATHGHTPFPVELMADGEEEGELVFEPKKPATPEASTNGGGGGDADDGRATVASPESEPAXXXXXXXXXXXXX------------------VNDEEAEEAARFARIAXXXXXXXXXXXXXXXXXXXXXXSPSSGNAQFGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXERGTSERQRQLEEDRRRQKARETEXXXXXXXXXXXXXXXLLREQYLGKKKVKKKIVKPSEKFSKIFQFDWDASEDTSRDANPLYNQRAQLNASFGRGYLAGIDMREQRKDSAFLTALMEKRQEEQRRAEAADHSLTAQDKADRERAREQQMAEVEAFSLAEADGMGDDPVLKGAHWSEKPLAEMAERDWRIFREDFDIRVKGGKAPLPLRFWEEGHLPSSVMEAIRELGYEKPSPIQRQAIPIGMERRDIIGIAETGSGKTAAFGIPMIAYILSLEAGMRDRVADQGPLALIMAPTRELAIQ------------------IEEECKKFCKFAGLNTVCVVGGQDIEAQAFTLRKGVEIIIGTPGRLNDCVEKHYLVLNQCNYVVLDEADRMIDMGFEDQVLAVLEAMGGTLKADDAELAYKQEKKAKQARSAADLVRVTAMFSATMPAAVEKMAKKYLRHPAIVQQIGDEDTGKNRRIEQRVLWMTEAQKKAKVTELLRGHDKEDR 2586
            A AGHDKP GTRNGDSGAATHG TPFPVELMADGEEEGELVFEPKKPATPEASTNGGG GDADDGRATVASPESEPA XXXXXXXXXXXX                  VNDEEAEEAARFARIA     XX        XXXXXXX PSSGNA FG XXXXXXXXXXXX                                    XXXXXXXXXXXXXXX     ERGTSERQRQLEEDRRRQKARETEXXXXXXXXXXXXXXXLLREQYLGKKKVKKKIVKPSEKFSKIFQFDWDASEDTSRDANPLYNQRAQLNASFGRGYLAGIDMREQRKDSAFLTALMEKRQEEQRRAEAADHSLTAQDKADRERAREQQMAEVEAFSLAEADGMGDDPVLKGAHWSEKPLAEMAERDWRIFREDFDIRVKGGKAPLPLRFWEEG+LPSSVMEAIRELGYEKPSPIQRQAIPIGMERRDIIGIAETGSGKTAAFGIPMIAYILSLEAGMRDRVADQGPLALIMAPTRELAIQ                  IEEECKKFCKFAGLNTVCVVGGQDIEAQAFTLRKGVEIIIGTPGRLNDCVEKHYLVLNQCNYVVLDEADRMIDMGFEDQVLAVLEAMGGTLKADDAELAYKQEKKAKQARSAADLVRVTAMFSATMPAAVE+MAKKYLRHPAIVQ IGDEDTGKNRRIEQRVLW+TEAQKKAKVTELLRGHDK+DR
Sbjct:  164 AAAGHDKPKGTRNGDSGAATHGQTPFPVELMADGEEEGELVFEPKKPATPEASTNGGGRGDADDGRATVASPESEPAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVNDEEAEEAARFARIAARAEEXXAERVKARAXXXXXXXXPSSGNAHFGGXXXXXXXXXXXXARGVVVGGMGAPEPPPGKLAFKTKKQREQEALQRLEXXXXXXXXXXXXXXX-----ERGTSERQRQLEEDRRRQKARETEXXXXXXXXXXXXXXXLLREQYLGKKKVKKKIVKPSEKFSKIFQFDWDASEDTSRDANPLYNQRAQLNASFGRGYLAGIDMREQRKDSAFLTALMEKRQEEQRRAEAADHSLTAQDKADRERAREQQMAEVEAFSLAEADGMGDDPVLKGAHWSEKPLAEMAERDWRIFREDFDIRVKGGKAPLPLRFWEEGNLPSSVMEAIRELGYEKPSPIQRQAIPIGMERRDIIGIAETGSGKTAAFGIPMIAYILSLEAGMRDRVADQGPLALIMAPTRELAIQQPLQCSHFLALFPPPSHQIEEECKKFCKFAGLNTVCVVGGQDIEAQAFTLRKGVEIIIGTPGRLNDCVEKHYLVLNQCNYVVLDEADRMIDMGFEDQVLAVLEAMGGTLKADDAELAYKQEKKAKQARSAADLVRVTAMFSATMPAAVERMAKKYLRHPAIVQ-IGDEDTGKNRRIEQRVLWLTEAQKKAKVTELLRGHDKDDR 888          
BLAST of mRNA_Ecto-sp13_S_contig1787.5438.1 vs. uniprot
Match: A0A835YKD8_9STRA (Putative DEAD box helicase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YKD8_9STRA)

HSP 1 Score: 635 bits (1638), Expect = 2.540e-213
Identity = 333/486 (68.52%), Postives = 397/486 (81.69%), Query Frame = 1
Query: 1240 LLREQYLGKKKVKKKIVKPSEKFSKIFQFDWDASEDTSRDANPLYNQRAQLNASFGRGYLAGIDMREQRKDSAFLTALMEKRQEEQRRAEAADHSLTAQDKADRERAREQQMAEVEAFSLAEADGMGDDPV-LKGAHWSEKPLAEMAERDWRIFREDFDIRVKGGKAPLPLRFWEEGHLPSSVMEAIRELGYEKPSPIQRQAIPIGMERRDIIGIAETGSGKTAAFGIPMIAYILSLEAGMRDRVADQGPLALIMAPTRELAIQIEEECKKFCKFAGLNTVCVVGGQDIEAQAFTLRKGVEIIIGTPGRLNDCVEKHYLVLNQCNYVVLDEADRMIDMGFEDQVLAVLEAMGGTLKADDAELAYKQEKKAKQARSAADLVRVTAMFSATMPAAVEKMAKKYLRHPAIVQQIGDEDTGKNRRIEQRVLWMTEAQKKAKVTELLRGHDKEDRVLVFINTKKSADMLGRQLEQAGFS--TGVLHGGKTQ 2688
            ++R+ YLG +K  K++VK ++KF  +FQFDW+A +DTS+D NPLY Q+AQ+NA +GRGY+AGIDMREQRKDSAFL ALM KRQEEQRR E  +  L+  D+ DRERAR +++      +  EA G     + L+GAHWSEKPL+EMAERDWRIFREDFDIRVKGGKAPLPLR WEEG L +++MEAI ELGY++PSPIQRQAIPIG++ RD+IGIAETGSGKTAAF IPM++YI+SL     +R  D GPLA++MAPTRELA QIEEECKKF KF GL T CVVGGQDIEAQ F LR+GVEI+IGTPGRLNDC+EKHYLVLNQC YVVLDEADRMID+GFE+QVLAVL+ MGG LK+ D   A +QE+ AK    A   VRVT+MFSATMP AVE+MAKKYLRHPAIVQ IGDEDTGKN+RI Q VL+M+EAQKKAK+ E LR    +++ L+F+NTKK+AD+L RQLEQ+GF+   GVLHGGKTQ
Sbjct:  209 MIRKSYLGGQKNTKRVVKAADKFKAVFQFDWEAGDDTSQDYNPLYQQKAQINALYGRGYIAGIDMREQRKDSAFLNALMAKRQEEQRRLEL-EQGLSEADRRDRERARARELQRARQQAATEAVGSERASIGLRGAHWSEKPLSEMAERDWRIFREDFDIRVKGGKAPLPLRNWEEGKLAATIMEAIEELGYKEPSPIQRQAIPIGLQFRDLIGIAETGSGKTAAFCIPMLSYIMSLPPERIERTPDDGPLAIVMAPTRELAQQIEEECKKFAKFTGLRTACVVGGQDIEAQGFELRRGVEIVIGTPGRLNDCLEKHYLVLNQCTYVVLDEADRMIDLGFEEQVLAVLDGMGGALKSTDETEALQQEEDAKSGSGA---VRVTSMFSATMPTAVERMAKKYLRHPAIVQ-IGDEDTGKNKRITQHVLFMSEAQKKAKLQEQLRSLKGDNKALIFVNTKKTADLLARQLEQSGFTGQVGVLHGGKTQ 689          
BLAST of mRNA_Ecto-sp13_S_contig1787.5438.1 vs. uniprot
Match: A0A7S3H980_9STRA (Hypothetical protein n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3H980_9STRA)

HSP 1 Score: 563 bits (1452), Expect = 5.120e-187
Identity = 297/484 (61.36%), Postives = 365/484 (75.41%), Query Frame = 1
Query: 1243 LREQYLGKKKVKKKIVKPSEKFSKIFQFDWDASEDTSR-DANPLYNQRAQLNASFGRGYLAGIDMREQRKDSAFLTALMEKRQEEQRRAEAADHSLTAQDKADRERAREQQMAEVEAFSLAEADGMGDDPVLK-GAHWSEKPLAEMAERDWRIFREDFDIRVKGGKAPLPLRFWEEGHLPSSVMEAIRELGYEKPSPIQRQAIPIGMERRDIIGIAETGSGKTAAFGIPMIAYILSLEAGMRDRVADQGPLALIMAPTRELAIQIEEECKKFCKFAGLNTVCVVGGQDIEAQAFTLRKGVEIIIGTPGRLNDCVEKHYLVLNQCNYVVLDEADRMIDMGFEDQVLAVLEAMGGTLKADDAELAYKQEKKAKQARSAADLVRVTAMFSATMPAAVEKMAKKYLRHPAIVQQIGDEDTGKNRRIEQRVLWMTEAQKKAKVTELLRGHDKEDRVLVFINTKKSADMLGRQLEQAGFSTGVLHGGKTQ 2688
            + E YLG  + KK+I KPS+KF+KIFQFDW+ ++DTSR D NPLYN R ++NA FGRGY+AG+D +EQRKDS FL +L EKR  E  R E     LT + K +R RARE+   E +   + E   +      K G+HWSEK LA+M ERDWRIFREDFDIR++GG+A LPLRFW E + P +V++AI   GYEKPSPIQRQA+PIG+  RDIIGIAETGSGKT AF +P++ Y+L L     DRV  QGPLA+IMAPTRELA QIEEEC K  KF    TV VVGGQ I+ Q FTLR GVEI+IGTPGR+ DC+E +YLVLNQCNYVVLDEADRMIDMGFE QV+AVLEAMGG LK +D E A  Q K+ + A +A  + RVTAMFSATMP AVE++A+ +LRHP +V+ IGDED+GKN+RIEQRVL++ EAQKK+KV E LR     D+V+VF+N+KK  D LGR L+  G+ +G+LHGG++Q
Sbjct:   94 IHEHYLGGGEKKKRITKPSDKFAKIFQFDWEETDDTSRNDVNPLYNNRVKINALFGRGYIAGVDQKEQRKDSNFLMSLSEKRINEANRYEDTSEILTEEQKRERARAREEAAQEFKRRRIQELSSLDKQVDSKMGSHWSEKALADMTERDWRIFREDFDIRIQGGRATLPLRFWNEANFPPAVVKAIEAAGYEKPSPIQRQAVPIGLSGRDIIGIAETGSGKTCAFLLPLVCYLLRLPKEYIDRVQAQGPLAVIMAPTRELAQQIEEECIKLLKFTNFRTVSVVGGQSIQDQGFTLRNGVEIVIGTPGRMLDCIENNYLVLNQCNYVVLDEADRMIDMGFEPQVVAVLEAMGGLLKDEDEEQAELQLKQNEGAETAKQIFRVTAMFSATMPPAVEQIARTFLRHPVLVR-IGDEDSGKNKRIEQRVLFVPEAQKKSKVVEELRRMASSDKVIVFVNSKKQGDNLGRHLDTLGYHSGILHGGRSQ 576          
BLAST of mRNA_Ecto-sp13_S_contig1787.5438.1 vs. uniprot
Match: A0A7S2SDZ3_9STRA (Hypothetical protein (Fragment) n=2 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SDZ3_9STRA)

HSP 1 Score: 553 bits (1424), Expect = 6.190e-183
Identity = 294/484 (60.74%), Postives = 365/484 (75.41%), Query Frame = 1
Query: 1240 LLREQYLGKKKVKKKIVKPSEKFSKIFQFDWDASEDTSRDANPLYNQRAQLNASFGRGYLAGIDMREQRKDSAFLTALMEKRQEEQRRAEAADHSLTAQDKADRERAREQQMAEVEAFSLAEADGMGDDPV-LKGAHWSEKPLAEMAERDWRIFREDFDIRVKGGKAPLPLRFWEEGHLPSSVMEAIRELGYEKPSPIQRQAIPIGMERRDIIGIAETGSGKTAAFGIPMIAYILSLEAGMRDRVADQGPLALIMAPTRELAIQIEEECKKFCKFAGLNTVCVVGGQDIEAQAFTLRKGVEIIIGTPGRLNDCVEKHYLVLNQCNYVVLDEADRMIDMGFEDQVLAVLEAMGGTLKADDAELAYKQEKKAKQARSAADLVRVTAMFSATMPAAVEKMAKKYLRHPAIVQQIGDEDTGKNRRIEQRVLWMTEAQKKAKVTELLRGHDKEDRVLVFINTKKSADMLGRQLEQAGFSTGVLHGGKTQ 2688
            ++REQYLGKK  KK+I KPSEKF+KIFQFDW+A EDTS+D NP+YN R  +N  FGRGY+AG+D++EQRK ++F  AL+EKRQEE+R+AE  D SL+  D  +RERAR +  A+++    A A  +    + LKG HW EK + +M ERDWRIFREDFDI V+GG++ LPLR WEE  +P  V+ A+ +L Y +PSPIQRQAIPIG+E RDIIGIAETGSGKT AF +PM++YIL+L A  R+R+AD+GPLALIMAPTRELA QIE E ++ C      TV VVGGQ IE Q F LRKGVEI+IGTPGRL D +E  YLVLNQ NYVVLDEADRMIDMGFE  +  VLE+MGG LK++  E AYKQE++AK+      L RVTAMFSATMPA VE++A+ YLRHPAIV  IGD D+GKN RI Q+V  + EAQK +++ +  R    ED+++VF+N KK  DM+ R LE+AG    +LHGGKTQ
Sbjct:  175 VIREQYLGKKVQKKRIAKPSEKFAKIFQFDWEAGEDTSQDLNPIYNDRMGINPLFGRGYIAGMDLQEQRKTNSFNRALVEKRQEEERKAELLDQSLSKNDLRERERARRKVAADLKDLEEARAARLEKTSIGLKGKHWKEKRVEDMNERDWRIFREDFDIMVRGGRSALPLRSWEESSIPELVLRAVHDLKYVEPSPIQRQAIPIGLEWRDIIGIAETGSGKTCAFVVPMLSYILNLPAYRRERLADEGPLALIMAPTRELAQQIEAETRRLCAHLDYKTVSVVGGQSIEDQGFHLRKGVEIVIGTPGRLKDALESRYLVLNQANYVVLDEADRMIDMGFEQDLNFVLESMGGLLKSEAEEEAYKQEEQAKRGEV---LYRVTAMFSATMPAEVERIARTYLRHPAIVS-IGDRDSGKNMRILQQVTMVPEAQKSSRLLQEARPSSSEDKIIVFVNEKKRCDMVARALEKAGVRCSILHGGKTQ 654          
BLAST of mRNA_Ecto-sp13_S_contig1787.5438.1 vs. uniprot
Match: A0A8K1C394_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1C394_PYTOL)

HSP 1 Score: 528 bits (1359), Expect = 2.410e-171
Identity = 292/509 (57.37%), Postives = 372/509 (73.08%), Query Frame = 1
Query: 1243 LREQYLGKKKVKKKIVKPSEKFSKIFQFDWDASEDTSRDANPLYNQRAQLNASFGRGYLAGIDMREQRKDSAFLTALMEKRQEEQRRAEAADHSLTAQDKADRERAREQQMAEVEAFSLAEADGMGD----DPVLKGAHWSEKPLAEMAERDWRIFREDFDIRVKGGKAPLPLRFWEEG-HLPSSVMEAIRELGYEKPSPIQRQAIPIGMERRDIIGIAETGSGKTAAFGIPMIAYILSLEAGMRDRVADQGPLALIMAPTRELAIQIEEECKKFCKFAG---------LNTVCVVGGQDIEAQAFTLRKGVEIIIGTPGRLNDCVEKHYLVLNQCNYVVLDEADRMIDMGFEDQVLAVLEAMGGTLKADDAELAYKQEKKAKQARSAAD-LVRVTAMFSATMPAAVEKMAKKYLRHPAIVQQIGDEDTGKNRRIEQRVLWMTEAQKKAKVTELL--------RGHD----KEDRVLVFINTKKSADMLGRQLEQAGFSTGVLHGGKTQ 2688
            +++QYLGKK  KKK+VK SEKF+KIFQFDW+A+EDTS D NPLY +R  +N  +GRGY AG+DMREQRK ++FL  L EKRQ EQR  +  +  L+ ++   R+R RE+ +  ++     E D M D    +    G HWSEKPLA+M ERDWRIFREDFDI +KGG+AP PLR WEE   +P +V +AIRELG+E+PSPIQ Q IPIG+ERRD+IGIAETGSGKTAAF IP+IAY+ SL A M  R  +QGPLAL+MAPTRELA+QIE+E  K CK+           + T+ VVGGQ IE QAF LR+G++IIIGTPGRL DC+E HYLVLNQCNYV+LDEADRMIDMGFE QV+AVLE MG  LK+++ E   + E++   A +  D  +RVT MFSATMP  VE++AK +LRHPAIV+ IGDED+GKN+RI+QRVL+M   +K+AK+TELL        R  +    + ++V+VF+N KK  D++ + +   GF T +LHGGK+Q
Sbjct:  206 IKDQYLGKKMQKKKVVKASEKFAKIFQFDWEANEDTSADLNPLYAKRLDVNLLYGRGYRAGVDMREQRKHNSFLNELAEKRQREQRLLDETNGELSKEEVDARQRERERTLRSMQE---REKDLMRDMVEREARTMGTHWSEKPLADMKERDWRIFREDFDITIKGGRAPNPLRKWEEALGVPEAVFQAIRELGFERPSPIQMQGIPIGLERRDVIGIAETGSGKTAAFVIPLIAYLYSLPATMIARTNEQGPLALVMAPTRELALQIEQEAMKLCKYTQVGLPEKQHPIRTLSVVGGQSIEDQAFKLREGIDIIIGTPGRLMDCLENHYLVLNQCNYVILDEADRMIDMGFEPQVVAVLENMGSLLKSENEE---EMEQQLTVAGAGKDHRLRVTTMFSATMPPEVERLAKTFLRHPAIVK-IGDEDSGKNKRIDQRVLFMNAGKKRAKLTELLTSILRNQPRSRNVKVTESNKVIVFVNIKKECDVVAKFVSNEGFRTTILHGGKSQ 707          
BLAST of mRNA_Ecto-sp13_S_contig1787.5438.1 vs. uniprot
Match: A0A5D6XJ01_9STRA (Uncharacterized protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XJ01_9STRA)

HSP 1 Score: 521 bits (1341), Expect = 1.750e-169
Identity = 288/515 (55.92%), Postives = 366/515 (71.07%), Query Frame = 1
Query: 1243 LREQYLGKKKVKKKIVKPSEKFSKIFQFDWDASEDTSRDANPLYNQRAQLNASFGRGYLAGIDMREQRKDSAFLTALMEKRQEEQRRAEAADHSLTAQDKADRERAREQQMAEVE--------AFSLAEADGMGDDPVLKGAHWSEKPLAEMAERDWRIFREDFDIRVKGGKAPLPLRFWEEGH--LPSSVMEAIRELGYEKPSPIQRQAIPIGMERRDIIGIAETGSGKTAAFGIPMIAYILSLEAGMRDRVADQGPLALIMAPTRELAIQIEEECKKFCKFA-----------GLNTVCVVGGQDIEAQAFTLRKGVEIIIGTPGRLNDCVEKHYLVLNQCNYVVLDEADRMIDMGFEDQVLAVLEAMGGTLKADDAELAYKQEKKAKQARSAADLVRVTAMFSATMPAAVEKMAKKYLRHPAIVQQIGDEDTGKNRRIEQRVLWMTEAQKKAKVTELLRGHDKED------------RVLVFINTKKSADMLGRQLEQAGFSTGVLHGGKTQ 2688
            +++QYLGKK  KKK VK SEKF+KIF+FDW+A+EDTS D NPLY QR  +N  +GRGY AG+DMREQRK ++FL+ L +KRQ E R A+  + +L+    A+R+RARE+ +  ++        A +  EA  MG        HWSEKPLA+M ERDWRIFREDFDI +KGG+AP PLR W E    LP +V +AI ++G+ +PSPIQ QAIP+G+ERRDIIGIAETGSGKTAAF IP+IAYI +L A    R A+QGPLAL+MAPTRELA+QIE+E  K CK             G+ T+ VVGGQ IE QAF LR+G++++IGTPGRL DC+E HYLVLNQCNYVVLDEADRMIDMGFE QV+AVLE MG  LK+++ E   +Q   A   +      RVT MFSATMP  VE++AK +LRHPAIV+ IGDED+GKN+RI+QRV+++   +KKAK+ ELL G  ++             +++VF+N KK  D++ + L  AGF   VLHGGK+Q
Sbjct:  140 IKDQYLGKKAPKKKAVKTSEKFTKIFKFDWEAAEDTSADLNPLYAQRLDVNLLYGRGYRAGVDMREQRKHNSFLSELSQKRQREHRTADEQNSALSQTQLAERQRARERALRSMQDRAQDAMQALARREAQTMG-------THWSEKPLADMRERDWRIFREDFDITIKGGRAPHPLRAWAEAAPALPQAVFDAIADMGFARPSPIQMQAIPVGLERRDIIGIAETGSGKTAAFVIPIIAYIYALPAANVRRTAEQGPLALVMAPTRELALQIEQEAIKLCKHTRVGGPDPETAHGIKTLAVVGGQSIEDQAFKLREGIDVVIGTPGRLMDCLESHYLVLNQCNYVVLDEADRMIDMGFEPQVVAVLENMGSLLKSENEEEMEQQISLAVAGQE--HRFRVTTMFSATMPVEVERLAKTFLRHPAIVK-IGDEDSGKNKRIDQRVVFLHAGKKKAKLVELLGGILRDQPKSRKEKAADGPKIIVFVNIKKECDVVAKMLAAAGFRITVLHGGKSQ 644          
BLAST of mRNA_Ecto-sp13_S_contig1787.5438.1 vs. uniprot
Match: A0A225WJ30_9STRA (DEAD/DEAH box RNA helicase n=1 Tax=Phytophthora megakarya TaxID=4795 RepID=A0A225WJ30_9STRA)

HSP 1 Score: 521 bits (1341), Expect = 8.340e-169
Identity = 286/513 (55.75%), Postives = 368/513 (71.73%), Query Frame = 1
Query: 1243 LREQYLGKKKVKKKIVKPSEKFSKIFQFDWDASEDTSRDANPLYNQRAQLNASFGRGYLAGIDMREQRKDSAFLTALMEKRQEEQRRAEAADHSLTAQDKADRERAREQQMAEVEAFSLAEADGMGD-DPVLKGAHWSEKPLAEMAERDWRIFREDFDIRVKGGKAPLPLRFWEEGH--LPSSVMEAIRELGYEKPSPIQRQAIPIGMERRDIIGIAETGSGKTAAFGIPMIAYILSLEAGMRDRVADQGPLALIMAPTRELAIQIEEECKKFCKFAG---------LNTVCVVGGQDIEAQAFTLRKGVEIIIGTPGRLNDCVEKHYLVLNQCNYVVLDEADRMIDMGFEDQVLAVLEAMGGTLKADDAELAYKQEKKAKQARSAADL---VRVTAMFSATMPAAVEKMAKKYLRHPAIVQQIGDEDTGKNRRIEQRVLWMTEAQKKAKVTELLRG----------HDKEDRV------LVFINTKKSADMLGRQLEQAGFSTGVLHGGKTQ 2688
            L++QYLGK   KKK+VK SEKFSKIFQFDW+ASEDTS D NPLY ++  +N  +GRGY AG+DMREQRK+++FL  L  KRQ+EQ+ A+  D +LT +  A R++ RE+ +  ++A        M   +    G HWSEK LA+M ERDWRIFREDFDI +KGG+AP PLR W E    LP +V +AI+++G+E+PSPIQ QAIPIG+++RDIIGIAETGSGKTAAF IP+IAYI SL A M  R  +QGPLAL+MAPTRELA+QIE+E  K CK+           + T+ VVGGQ IE Q F LR+GV+IIIGTPGRL DC+E HYLVLNQCNYVVLDEADRMIDMGFE QV+AVLE MG  LK+++ E   +Q K A  A+   +L   +RVT MFSATMP  VE++AK +LRHP+IV+ IGDED+GKN+RI+QRV++M   +K++K+ ++LR             ++++V      +VF+N KK  D + + +   GF   +LHGGKTQ
Sbjct:  185 LKDQYLGKTVKKKKVVKASEKFSKIFQFDWEASEDTSTDLNPLYAKKMDVNLLYGRGYRAGVDMREQRKNNSFLDELSHKRQKEQQLADETDDNLTTEQVAARQQERERALRNMQARERTRMQEMASREAKTMGTHWSEKALADMKERDWRIFREDFDITLKGGRAPNPLRKWNEAGEMLPDAVFKAIKDMGFERPSPIQMQAIPIGLQKRDIIGIAETGSGKTAAFMIPIIAYIYSLPAAMVARTGEQGPLALVMAPTRELALQIEQEAIKLCKYTSVGLPEKMNPIKTLSVVGGQSIEDQGFRLREGVDIIIGTPGRLMDCLESHYLVLNQCNYVVLDEADRMIDMGFEPQVVAVLENMGSLLKSENEEEMEQQLKLANGAQPGEELQHRLRVTTMFSATMPVEVERLAKTFLRHPSIVK-IGDEDSGKNKRIDQRVMFMNPGKKRSKLVDVLRDILSAQSVSVPRSRKEKVVDGAKIIVFVNIKKECDSVTKFVSSEGFRCTILHGGKTQ 696          
BLAST of mRNA_Ecto-sp13_S_contig1787.5438.1 vs. uniprot
Match: A0A2D4CG39_PYTIN (Uncharacterized protein n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4CG39_PYTIN)

HSP 1 Score: 523 bits (1346), Expect = 9.140e-169
Identity = 290/511 (56.75%), Postives = 371/511 (72.60%), Query Frame = 1
Query: 1243 LREQYLGKKKVKKKIVKPSEKFSKIFQFDWDASEDTSRDANPLYNQRAQLNASFGRGYLAGIDMREQRKDSAFLTALMEKRQEEQRRAEAADHSLTAQDKADRERAREQQMAEVEAFS------LAEADGMGDDPVLKGAHWSEKPLAEMAERDWRIFREDFDIRVKGGKAPLPLRFWEEGH-LPSSVMEAIRELGYEKPSPIQRQAIPIGMERRDIIGIAETGSGKTAAFGIPMIAYILSLEAGMRDRVADQGPLALIMAPTRELAIQIEEECKKFCKFAG---------LNTVCVVGGQDIEAQAFTLRKGVEIIIGTPGRLNDCVEKHYLVLNQCNYVVLDEADRMIDMGFEDQVLAVLEAMGGTLKADDAELAYKQEKKAKQARSAAD-LVRVTAMFSATMPAAVEKMAKKYLRHPAIVQQIGDEDTGKNRRIEQRVLWMTEAQKKAKVTELL------RGHDKEDR------VLVFINTKKSADMLGRQLEQAGFSTGVLHGGKTQ 2688
            ++++YLGKK  KKK+VK SEKF+KIFQFDW+A EDTS + NPLY +R  +N  FGRGY AG+D+REQRK ++FL  L +KRQ EQR A+  +  LT ++ A RER R++ +  ++A        LAE +         G HWSEK L EM ERDWRIFREDF+I +KGG+AP PLR WEE   LP +V +A++ LG+E+PSPIQ QAIPIG++RRD+IGIAETGSGKTAAF IPMIAY+ +L A M  R  +QGPLAL+MAPTRELA+QIE+E  K CKF           + T+ VVGGQ IE QAF LR+GV+IIIGTPGRL DC+E HYLVLNQCNYVVLDEADRMIDMGFE QV+AVLE MG  LK+++ E   + E++   A +  D  +RVT MFSATMP  VE++AK +LRHPAIV+ IGDED+GKN+RI+QRVL+M  A+KKAK+ ELL      +   +++R      ++VF+N KK  D++ + +   GF + +LHGGK+Q
Sbjct:  257 IKDKYLGKKVQKKKVVKASEKFAKIFQFDWEAGEDTSAELNPLYAKRMDVNLLFGRGYRAGVDLREQRKHNSFLQELAQKRQREQRLADQQNAELTPEEVARRERERQEALRNMQARERDAIRELAEREAQ-----TMGTHWSEKALEEMTERDWRIFREDFEITIKGGRAPKPLRKWEEAQGLPDAVFKAVQALGFERPSPIQMQAIPIGLQRRDVIGIAETGSGKTAAFIIPMIAYLYALPATMIARTGEQGPLALVMAPTRELALQIEQEAIKLCKFTAVGLAEKQHPIRTLSVVGGQSIEDQAFKLRQGVDIIIGTPGRLMDCMENHYLVLNQCNYVVLDEADRMIDMGFEPQVVAVLENMGSLLKSENEE---EMEQQLTLAGAGHDHRLRVTTMFSATMPPEVERLAKTFLRHPAIVK-IGDEDSGKNKRIDQRVLFMNPAKKKAKLMELLGSFLSGQPRSRKERTTDGSKIIVFVNIKKECDVVAKAISAEGFRSTILHGGKSQ 758          
BLAST of mRNA_Ecto-sp13_S_contig1787.5438.1 vs. uniprot
Match: D0N623_PHYIT (DEAD/DEAH box RNA helicase, putative n=3 Tax=Phytophthora TaxID=4783 RepID=D0N623_PHYIT)

HSP 1 Score: 520 bits (1340), Expect = 1.210e-168
Identity = 289/512 (56.45%), Postives = 365/512 (71.29%), Query Frame = 1
Query: 1243 LREQYLGKKKVKKKIVKPSEKFSKIFQFDWDASEDTSRDANPLYNQRAQLNASFGRGYLAGIDMREQRKDSAFLTALMEKRQEEQRRAEAADHSLTAQDKADRERAREQQMAEVEAFSLAEADGMGD-DPVLKGAHWSEKPLAEMAERDWRIFREDFDIRVKGGKAPLPLRFWEEGH--LPSSVMEAIRELGYEKPSPIQRQAIPIGMERRDIIGIAETGSGKTAAFGIPMIAYILSLEAGMRDRVADQGPLALIMAPTRELAIQIEEECKKFCKFAG---------LNTVCVVGGQDIEAQAFTLRKGVEIIIGTPGRLNDCVEKHYLVLNQCNYVVLDEADRMIDMGFEDQVLAVLEAMGGTLKADDAELAYKQEKKAKQARSAA--DLVRVTAMFSATMPAAVEKMAKKYLRHPAIVQQIGDEDTGKNRRIEQRVLWMTEAQKKAKVTELLRG----------HDKEDRV------LVFINTKKSADMLGRQLEQAGFSTGVLHGGKTQ 2688
            L++QYLGK   KKK++K SEKFSK+FQFDW+ASEDTS D NPLY  R  +N  +GRGY AG+DMREQRK ++FL  L  KRQ+EQ++A+A D SLT++  A R++ RE+ +  ++A        M   +    G HWSEK L EM ERDWRIFREDFDI +KGG+AP PLR W E    LP +V +AI++LG+E+PSPIQ QAIPIG+++RDIIGIAETGSGKTAAF IP+IAYI SL A M  R  +QGPLAL+MAPTRELA+QIE+E  K CK            + T+ VVGGQ IE Q F LR+GVEIIIGTPGRL DC+E HYLVLNQCNYVVLDEADRMIDMGFE QV+AVLE MG  LK+++ E   +Q   A +A+       +RVT MFSATMP  VE++AK +LRHP+IV+ IGDED+GKN+RIEQRV++M   +K++K+ E+LR             ++++V      +VF+N KK  D + + +   GF   +LHGGKTQ
Sbjct:  187 LKDQYLGKTVKKKKVIKASEKFSKVFQFDWEASEDTSADLNPLYAHRMDVNLLYGRGYRAGVDMREQRKQNSFLEELSHKRQKEQQQADATDGSLTSEQIAARQQERERALRNMQARERDRIQEMASREAKTMGTHWSEKSLDEMKERDWRIFREDFDITLKGGRAPHPLRKWSEAGKMLPDAVYKAIKDLGFERPSPIQMQAIPIGLQKRDIIGIAETGSGKTAAFVIPIIAYIYSLPATMVARTGEQGPLALVMAPTRELALQIEQEAIKLCKHTSVGLPEKMNPIKTLSVVGGQSIEDQGFRLREGVEIIIGTPGRLMDCLESHYLVLNQCNYVVLDEADRMIDMGFEPQVVAVLENMGSLLKSENEEEMEQQLTLANRAQLGEFQHRLRVTTMFSATMPVEVERLAKTFLRHPSIVK-IGDEDSGKNKRIEQRVMFMNPGKKRSKLVEVLRDILSAQNVPVPRSRKEKVVDGAKIIVFVNIKKECDSVAKFISSEGFRCTILHGGKTQ 697          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig1787.5438.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LDQ4_ECTSI0.000e+092.41DEAD box helicase n=1 Tax=Ectocarpus siliculosus T... [more]
A0A6H5KZB6_9PHAE0.000e+085.91Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A835YKD8_9STRA2.540e-21368.52Putative DEAD box helicase n=1 Tax=Tribonema minus... [more]
A0A7S3H980_9STRA5.120e-18761.36Hypothetical protein n=1 Tax=Spumella elongata Tax... [more]
A0A7S2SDZ3_9STRA6.190e-18360.74Hypothetical protein (Fragment) n=2 Tax=Rhizochrom... [more]
A0A8K1C394_PYTOL2.410e-17157.37Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
A0A5D6XJ01_9STRA1.750e-16955.92Uncharacterized protein n=1 Tax=Pythium brassicum ... [more]
A0A225WJ30_9STRA8.340e-16955.75DEAD/DEAH box RNA helicase n=1 Tax=Phytophthora me... [more]
A0A2D4CG39_PYTIN9.140e-16956.75Uncharacterized protein n=1 Tax=Pythium insidiosum... [more]
D0N623_PHYIT1.210e-16856.45DEAD/DEAH box RNA helicase, putative n=3 Tax=Phyto... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig1787contigEcto-sp13_S_contig1787:463..5090 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop1
Start1
Seed ortholog score1088.2
Seed ortholog evalue0.0
Seed eggNOG ortholog2880.D8LDQ4
Preferred namePRP28
Model size2712
KEGG koko:K12858
KEGG Pathwayko03040,map03040
KEGG ModuleM00354
Hectar predicted targeting categoryother localisation
GOsGO:0000245,GO:0000375,GO:0000377,GO:0000384,GO:0000395,GO:0000398,GO:0003674,GO:0003676,GO:0003723,GO:0003724,GO:0003824,GO:0004004,GO:0004386,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005682,GO:0005730,GO:0005737,GO:0006139,GO:0006376,GO:0006396,GO:0006397,GO:0006725,GO:0006807,GO:0008026,GO:0008104,GO:0008150,GO:0008152,GO:0008186,GO:0008380,GO:0009987,GO:0010467,GO:0010501,GO:0016043,GO:0016070,GO:0016071,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0022607,GO:0022613,GO:0022618,GO:0030532,GO:0031974,GO:0031981,GO:0032991,GO:0033036,GO:0034622,GO:0034641,GO:0035770,GO:0036464,GO:0042623,GO:0043170,GO:0043186,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044422,GO:0044424,GO:0044428,GO:0044444,GO:0044446,GO:0044464,GO:0045292,GO:0045495,GO:0046483,GO:0051179,GO:0060293,GO:0065003,GO:0070013,GO:0070035,GO:0071704,GO:0071826,GO:0071840,GO:0090304,GO:0097159,GO:0097525,GO:0120114,GO:0140098,GO:1901360,GO:1901363,GO:1990904
Exons5
EggNOG free text desc.helicase activity
EggNOG OGsCOG0513@1,KOG0333@2759
Ec32 ortholog descriptionDEAD box helicase
Ec32 orthologEc-19_001540.1
EC3.6.4.13
Cds size2712
COG Functional cat.L
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko01000,ko03041
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681462925.3568795-CDS-Ecto-sp13_S_contig1787:462..5881681462925.3568795-CDS-Ecto-sp13_S_contig1787:462..588Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig1787 463..588 -
1681462925.368299-CDS-Ecto-sp13_S_contig1787:1115..12381681462925.368299-CDS-Ecto-sp13_S_contig1787:1115..1238Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig1787 1116..1238 -
1681462925.3765516-CDS-Ecto-sp13_S_contig1787:1853..20511681462925.3765516-CDS-Ecto-sp13_S_contig1787:1853..2051Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig1787 1854..2051 -
1681462925.3855839-CDS-Ecto-sp13_S_contig1787:2380..26171681462925.3855839-CDS-Ecto-sp13_S_contig1787:2380..2617Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig1787 2381..2617 -
1681462925.3953948-CDS-Ecto-sp13_S_contig1787:3062..50901681462925.3953948-CDS-Ecto-sp13_S_contig1787:3062..5090Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig1787 3063..5090 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig1787.5438.1prot_Ecto-sp13_S_contig1787.5438.1Ectocarpus species13 EcNAP12_S_4_19mpolypeptideEcto-sp13_S_contig1787 463..5090 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp13_S_contig1787.5438.1

>prot_Ecto-sp13_S_contig1787.5438.1 ID=prot_Ecto-sp13_S_contig1787.5438.1|Name=mRNA_Ecto-sp13_S_contig1787.5438.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=904bp
MSRTDEGQEDSDRRSSSHKSSHKSSRSSKHSSSRDKGESSSSRKRDRSEH
DHRSSGSNFKERSKDRSSRDSGGDDGEQRSGKRHRRGEDEKDGGGGGGGS
SSRSKSSSSSSHHKSKHRDKDGKSSSSSSKHKKESRSGKDKDRRKHSSKS
KGDEGRTSNGGGAGGGGATAGHDKPNGTRNGDSGAATHGHTPFPVELMAD
GEEEGELVFEPKKPATPEASTNGGGGGDADDGRATVASPESEPAAAEAPA
PAPAPAPVNDEEAEEAARFARIAARAEERAAERAKARAAAAAAAASPSSG
NAQFGGGGGGGGGGGGGGADAAAARGVVGGGMGAPEPPPGKLAFKTKKQR
EQEALQRLEEQRKSKRREQEAAAAERGTSERQRQLEEDRRRQKARETERE
EARAQREKEKERELLREQYLGKKKVKKKIVKPSEKFSKIFQFDWDASEDT
SRDANPLYNQRAQLNASFGRGYLAGIDMREQRKDSAFLTALMEKRQEEQR
RAEAADHSLTAQDKADRERAREQQMAEVEAFSLAEADGMGDDPVLKGAHW
SEKPLAEMAERDWRIFREDFDIRVKGGKAPLPLRFWEEGHLPSSVMEAIR
ELGYEKPSPIQRQAIPIGMERRDIIGIAETGSGKTAAFGIPMIAYILSLE
AGMRDRVADQGPLALIMAPTRELAIQIEEECKKFCKFAGLNTVCVVGGQD
IEAQAFTLRKGVEIIIGTPGRLNDCVEKHYLVLNQCNYVVLDEADRMIDM
GFEDQVLAVLEAMGGTLKADDAELAYKQEKKAKQARSAADLVRVTAMFSA
TMPAAVEKMAKKYLRHPAIVQQIGDEDTGKNRRIEQRVLWMTEAQKKAKV
TELLRGHDKEDRVLVFINTKKSADMLGRQLEQAGFSTGVLHGGKTQASIY
VCV*
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mRNA from alignment at Ecto-sp13_S_contig1787:463..5090-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp13_S_contig1787.5438.1 ID=mRNA_Ecto-sp13_S_contig1787.5438.1|Name=mRNA_Ecto-sp13_S_contig1787.5438.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=4628bp|location=Sequence derived from alignment at Ecto-sp13_S_contig1787:463..5090- (Ectocarpus species13 EcNAP12_S_4_19m)
ATGTCGAGGACCGACGAGGGGCAAGAGGATTCCGACCGGAGGTCCTCCTC CCACAAAAGCAGCCACAAGAGCTCCCGCTCCTCCAAGCACTCCTCCTCGA GAGACAAGGGCGAGTCCTCTTCTTCTCGCAAGCGGGACAGGAGCGAGCAT GACCACCGCTCGAGCGGCAGCAACTTCAAGGAGCGCAGTAAGGACCGCTC TTCGAGGGACAGCGGTGGGGATGACGGCGAGCAGCGCAGCGGCAAGCGGC ATCGACGGGGGGAGGACGAGAAAGACGGGGGCGGCGGCGGCGGCGGCAGC AGCAGTCGCTCCAAGTCTTCGTCGTCGTCTTCTCACCACAAGTCCAAGCA CCGGGATAAGGACGGAAAGAGCAGCAGCAGCAGCAGCAAGCACAAGAAGG AGAGCCGCAGCGGCAAGGATAAGGACCGGCGAAAGCACAGCAGCAAGAGC AAGGGCGACGAAGGCAGGACCAGCAACGGAGGAGGAGCAGGAGGAGGAGG AGCTACTGCCGGCCACGACAAGCCGAACGGCACACGCAACGGGGATTCGG GCGCGGCAACGCACGGGCACACCCCTTTCCCGGTCGAACTCATGGCCGAC GGGGAGGAAGAGGGAGAGCTCGTCTTCGAACCGAAGAAGCCCGCCACTCC CGAGGCCTCCACGAACGGAGGAGGAGGAGGAGATGCTGATGACGGCCGCG CTACGGTAGCCAGCCCCGAGAGCGAGCCGGCCGCGGCAGAAGCACCGGCA CCGGCACCGGCGCCGGCGCCGGTGAACGACGAAGAGGCGGAGGAGGCCGC CCGGTTCGCCCGCATCGCCGCGCGCGCGGAGGAGAGGGCGGCCGAGCGCG CCAAGGCTCGGGCCGCCGCCGCCGCCGCCGCAGCGTCTCCTTCCAGCGGA AACGCGCAGTTTGGCGGGGGTGGTGGTGGTGGTGGTGGTGGTGGTGGTGG TGGTGCTGATGCTGCGGCGGCGAGGGGCGTCGTGGGGGGGGGCATGGGGG CCCCGGAGCCCCCCCCAGGGAAGCTGGCCTTCAAGACCAAGAAGCAGCGC GAGCAGGAGGCGCTGCAGCGGCTGGAGGAGCAGCGCAAGTCGAAGCGGAG GGAGCAGGAGGCCGCGGCGGCGGAGCGGGGCACGTCTGAGCGCCAGCGGC AGTTGGAGGAGGACCGTCGGCGGCAGAAGGCCCGGGAGACGGAGCGTGAG GAGGCCCGGGCGCAGCGCGAGAAGGAGAAGGAGCGGGAGCTCCTGCGCGA GCAGTACCTGGGCAAGAAGAAGGTCAAGAAGAAGATCGTCAAGCCTTCGG AGAAGTTCAGCAAGATCTTCCAGTTTGACTGGGACGCGAGCGAGGACACC TCGCGGGACGCCAACCCGCTCTACAACCAGCGGGCCCAGCTCAACGCGTC CTTCGGGCGCGGCTACCTCGCTGGGATCGACATGCGCGAGCAGCGCAAGG ACAGCGCATTCCTGACGGCCCTGATGGAGAAGCGGCAGGAGGAACAGCGC CGAGCCGAGGCCGCTGACCACTCCCTGACGGCCCAGGACAAGGCGGACCG CGAGCGCGCCAGGGAGCAGCAGATGGCCGAGGTGGAGGCGTTCTCGCTGG CGGAGGCCGACGGCATGGGCGACGACCCCGTGCTCAAGGGGGCTCACTGG TCGGAGAAACCGCTGGCGGAGATGGCGGAGAGGGACTGGAGGATCTTCCG GGAGGACTTCGACATCCGGGTCAAGGGCGGCAAGGCGCCGCTGCCGCTGC GGTTCTGGGAGGAGGGCCACCTGCCGTCGAGCGTCATGGAGGCCATCCGG GAGCTGGGCTACGAGAAGCCGAGCCCCATCCAGCGGCAGGCGATCCCGAT CGGCATGGAGCGGAGGGACATCATCGGCATCGCCGAGACAGGTTCGGGAA AGACGGCGGCCTTCGGCATCCCCATGATCGCCTACATCCTGTCCCTGGAG GCCGGCATGCGCGACCGGGTGGCGGACCAGGGGCCTCTCGCGCTCATTAT GGCACCCACTCGCGAGCTCGCAATCCAGGTAATTATCCCCGGGGCTAAGG GTGTATACTCGTTGCCGTGAATGCCGCAATCGCTAGACTATGGGCCTCGC ATCCCTACAGTGCAAAGCCGGGATGGGGCACGCCGGTTTTTCATTGGCCC AGGGGGGGGGGCCGGGGCAAGAGTGCGGGGAGGGTATGTAACACCCGTTT GGAGATGAGCCAGCGGTAACGCACCAGCAGAGTGCGATCGATGTGGGTCG TGTTTCCTGTGTTGTCGATCATGGCAGCTGGTGTTGGGACGTTGGGAGAG ATGTGCCGTACCACACGGGAATGGCAAACGTCGACACTAGGTCGAAATAT CAGCATAAATAATTGAGGGATGATACATGCGACAAAGAGGCACTGGGCGC AACAGTATCATGAAGTGCAGCAACGCCTTCAATGTAACCATTTTCTCGCG TTATTTCCCCCCCCTCCCACCAGATCGAGGAAGAGTGCAAGAAGTTCTGC AAGTTCGCGGGGCTCAACACAGTCTGCGTGGTCGGCGGGCAAGACATCGA GGCCCAGGCCTTCACCCTCCGGAAGGGGGTTGAGATCATCATCGGCACTC CCGGTCGGCTCAACGACTGCGTGGAGAAGCACTACCTGGTGCTGAACCAG TGCAACTACGTGGTGCTTGACGAGGCTGACCGGATGATTGACATGGGTTT CGAAGACCAGGTGTGTATGAGAGGTGTCTTCTCCGCTGTTGGCTATTATA AGCTCTGTTGGAAAAAGGGGGGGTGGTTGGAGCTACCGTGTGTTTATGGT GTAGTAGCCCCATCTTGTTGATGTCGAGGCTGGTGGTGTTTTTTTGTTAT TGAAAATGAGCGGCATGTTCCCGTCGACATGGATTTTCCCGAACACGATG CGTTTGTAACGTCAATAAGATCGTCATCAACAACACAAACAACAGCAACA ACATTAACGAGATAAGCAACAACAAACCGCCGCCGCAGGACCAACCATCA ATAACAAAAACAACAATTGCTTCGTATGTACACCCGCAGGTGTTAGCAGT GCTGGAGGCCATGGGCGGCACCCTCAAGGCCGACGACGCGGAGTTGGCCT ACAAGCAGGAGAAGAAGGCTAAGCAGGCCAGGAGCGCGGCCGACCTGGTG CGCGTGACGGCCATGTTCAGCGCCACCATGCCCGCGGCCGTAGAGAAGAT GGCCAAGAAGTATCTGCGACACCCCGCGATCGTACAGGTGTGTATCTGTC GTCATTGTGGTTGTGGTTGTGGTTGTGGTTGTGGTTGTTGCTGTTGCTGC TGCCGACTTGTTGCTGAGAACGATTTTACGGAAGGTGTAGTGTTGTCTTT GTTGTTTGTGCGAGGAACATCGTTGTCGTTGGTGTTGCTGGTACGAAGCG TTGGAGCCGCCGTTTATACTGTTCGCGACGGACGTCGTGCCAGATTTTCC AATACGCCATGTAAAAGAACAACGCCGGTATAATTGGAAACGTCGCACCT CACATCCATCGCGATAATACTAGTAGACGGGTTCAACCTCTCAACCGCCG ATGCAGACACTTCCTGTTTTCTGAGCCTAAAACCCTAGGAATAGGTTGTG TCCCTAGGAATGTTTTTTGTACCGCGGGACAAAGTGGGACAGCACGAAGT CGACACCAGCGCCGAGATTTCGGTCTTCGTGTTCCCCAAGAAGAGTTGCC AATCGTATACGAACGCCCTTCCCCATTAAGGCATGCAAGACATGAGCACC CCCCCCCCTGACGGGTAAGATTACTTTAGCAAACGCAGAAGATGAATTGA AAACCTTTCAAAATATCCCCTCCCCTTCCCTAAACTCTGTTGCGCGCCGG AGCAGATTGGGGACGAAGACACGGGTAAGAACAGACGTATCGAGCAGAGG GTGTTGTGGATGACGGAGGCACAGAAGAAGGCTAAGGTCACGGAGCTCCT CCGCGGTCACGACAAGGAAGACAGGGTAAGTACGTGGGTAAGGCTGTGCG TGTACAGGTTTTGCAGATTGCTATTTTGTTGGTACGTTGCACTTCGCCAG GCTCTTCGATTCAAGAAAACACGTCAGCTGTGTGAGCTGTCGGGTAGCTG GCAGCCAGCTGTGGGTTGATCCTGCTCCCGGCTTGTGTTTTTATCTTGTA CGCATATCGCCGTTAGATTAGACTGCTGTGCTCTCATGAGCCCAGTCCTC CGGAGGGATCACTTGTAGGTTATACAGCTTTCCGTTGTCAACACGATACT CAGGTTTTTGGGTTATGTTATGAGACTTACCGTTGTGTGCTGCTTCCTGT ACGCGTACCATGGTAAGAATGCGTGCATCTTTTGGGCTGCTGTGTCATTG TAAAAACACACCACCCCCCCCCCCCCCCCCCCCCCCCCTCCCCAAGAACA TGAGACGTGTTCTCACTTTCTCCTCCCCCCCCCCCCGCTCCATTGTATTT TCCGTTTTGTCGGACCCTCAAACCCGACGCCGTAATCTGGTCCATTTGTC AGGTTCTGGTTTTCATCAACACAAAGAAGAGTGCGGACATGCTCGGGCGG CAGCTGGAGCAGGCGGGCTTCTCCACCGGGGTCCTCCACGGCGGCAAGAC TCAGGCAAGTATTTATGTTTGTGTTTGA
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Coding sequence (CDS) from alignment at Ecto-sp13_S_contig1787:463..5090-

>mRNA_Ecto-sp13_S_contig1787.5438.1 ID=mRNA_Ecto-sp13_S_contig1787.5438.1|Name=mRNA_Ecto-sp13_S_contig1787.5438.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=2712bp|location=Sequence derived from alignment at Ecto-sp13_S_contig1787:463..5090- (Ectocarpus species13 EcNAP12_S_4_19m)
ATGTCGAGGACCGACGAGGGGCAAGAGGATTCCGACCGGAGGTCCTCCTC
CCACAAAAGCAGCCACAAGAGCTCCCGCTCCTCCAAGCACTCCTCCTCGA
GAGACAAGGGCGAGTCCTCTTCTTCTCGCAAGCGGGACAGGAGCGAGCAT
GACCACCGCTCGAGCGGCAGCAACTTCAAGGAGCGCAGTAAGGACCGCTC
TTCGAGGGACAGCGGTGGGGATGACGGCGAGCAGCGCAGCGGCAAGCGGC
ATCGACGGGGGGAGGACGAGAAAGACGGGGGCGGCGGCGGCGGCGGCAGC
AGCAGTCGCTCCAAGTCTTCGTCGTCGTCTTCTCACCACAAGTCCAAGCA
CCGGGATAAGGACGGAAAGAGCAGCAGCAGCAGCAGCAAGCACAAGAAGG
AGAGCCGCAGCGGCAAGGATAAGGACCGGCGAAAGCACAGCAGCAAGAGC
AAGGGCGACGAAGGCAGGACCAGCAACGGAGGAGGAGCAGGAGGAGGAGG
AGCTACTGCCGGCCACGACAAGCCGAACGGCACACGCAACGGGGATTCGG
GCGCGGCAACGCACGGGCACACCCCTTTCCCGGTCGAACTCATGGCCGAC
GGGGAGGAAGAGGGAGAGCTCGTCTTCGAACCGAAGAAGCCCGCCACTCC
CGAGGCCTCCACGAACGGAGGAGGAGGAGGAGATGCTGATGACGGCCGCG
CTACGGTAGCCAGCCCCGAGAGCGAGCCGGCCGCGGCAGAAGCACCGGCA
CCGGCACCGGCGCCGGCGCCGGTGAACGACGAAGAGGCGGAGGAGGCCGC
CCGGTTCGCCCGCATCGCCGCGCGCGCGGAGGAGAGGGCGGCCGAGCGCG
CCAAGGCTCGGGCCGCCGCCGCCGCCGCCGCAGCGTCTCCTTCCAGCGGA
AACGCGCAGTTTGGCGGGGGTGGTGGTGGTGGTGGTGGTGGTGGTGGTGG
TGGTGCTGATGCTGCGGCGGCGAGGGGCGTCGTGGGGGGGGGCATGGGGG
CCCCGGAGCCCCCCCCAGGGAAGCTGGCCTTCAAGACCAAGAAGCAGCGC
GAGCAGGAGGCGCTGCAGCGGCTGGAGGAGCAGCGCAAGTCGAAGCGGAG
GGAGCAGGAGGCCGCGGCGGCGGAGCGGGGCACGTCTGAGCGCCAGCGGC
AGTTGGAGGAGGACCGTCGGCGGCAGAAGGCCCGGGAGACGGAGCGTGAG
GAGGCCCGGGCGCAGCGCGAGAAGGAGAAGGAGCGGGAGCTCCTGCGCGA
GCAGTACCTGGGCAAGAAGAAGGTCAAGAAGAAGATCGTCAAGCCTTCGG
AGAAGTTCAGCAAGATCTTCCAGTTTGACTGGGACGCGAGCGAGGACACC
TCGCGGGACGCCAACCCGCTCTACAACCAGCGGGCCCAGCTCAACGCGTC
CTTCGGGCGCGGCTACCTCGCTGGGATCGACATGCGCGAGCAGCGCAAGG
ACAGCGCATTCCTGACGGCCCTGATGGAGAAGCGGCAGGAGGAACAGCGC
CGAGCCGAGGCCGCTGACCACTCCCTGACGGCCCAGGACAAGGCGGACCG
CGAGCGCGCCAGGGAGCAGCAGATGGCCGAGGTGGAGGCGTTCTCGCTGG
CGGAGGCCGACGGCATGGGCGACGACCCCGTGCTCAAGGGGGCTCACTGG
TCGGAGAAACCGCTGGCGGAGATGGCGGAGAGGGACTGGAGGATCTTCCG
GGAGGACTTCGACATCCGGGTCAAGGGCGGCAAGGCGCCGCTGCCGCTGC
GGTTCTGGGAGGAGGGCCACCTGCCGTCGAGCGTCATGGAGGCCATCCGG
GAGCTGGGCTACGAGAAGCCGAGCCCCATCCAGCGGCAGGCGATCCCGAT
CGGCATGGAGCGGAGGGACATCATCGGCATCGCCGAGACAGGTTCGGGAA
AGACGGCGGCCTTCGGCATCCCCATGATCGCCTACATCCTGTCCCTGGAG
GCCGGCATGCGCGACCGGGTGGCGGACCAGGGGCCTCTCGCGCTCATTAT
GGCACCCACTCGCGAGCTCGCAATCCAGATCGAGGAAGAGTGCAAGAAGT
TCTGCAAGTTCGCGGGGCTCAACACAGTCTGCGTGGTCGGCGGGCAAGAC
ATCGAGGCCCAGGCCTTCACCCTCCGGAAGGGGGTTGAGATCATCATCGG
CACTCCCGGTCGGCTCAACGACTGCGTGGAGAAGCACTACCTGGTGCTGA
ACCAGTGCAACTACGTGGTGCTTGACGAGGCTGACCGGATGATTGACATG
GGTTTCGAAGACCAGGTGTTAGCAGTGCTGGAGGCCATGGGCGGCACCCT
CAAGGCCGACGACGCGGAGTTGGCCTACAAGCAGGAGAAGAAGGCTAAGC
AGGCCAGGAGCGCGGCCGACCTGGTGCGCGTGACGGCCATGTTCAGCGCC
ACCATGCCCGCGGCCGTAGAGAAGATGGCCAAGAAGTATCTGCGACACCC
CGCGATCGTACAGCAGATTGGGGACGAAGACACGGGTAAGAACAGACGTA
TCGAGCAGAGGGTGTTGTGGATGACGGAGGCACAGAAGAAGGCTAAGGTC
ACGGAGCTCCTCCGCGGTCACGACAAGGAAGACAGGGTTCTGGTTTTCAT
CAACACAAAGAAGAGTGCGGACATGCTCGGGCGGCAGCTGGAGCAGGCGG
GCTTCTCCACCGGGGTCCTCCACGGCGGCAAGACTCAGGCAAGTATTTAT
GTTTGTGTTTGA
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