prot_Ecto-sp13_S_contig17863.5435.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig17863.5435.1
Unique Nameprot_Ecto-sp13_S_contig17863.5435.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length93
Homology
BLAST of mRNA_Ecto-sp13_S_contig17863.5435.1 vs. uniprot
Match: D7G637_ECTSI (Homocysteine S-methyltransferase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G637_ECTSI)

HSP 1 Score: 176 bits (447), Expect = 8.540e-52
Identity = 89/93 (95.70%), Postives = 91/93 (97.85%), Query Frame = 0
Query:    1 EEENAKQHQQPLSGSEGRPHRRRLRPLVAASLGCYGAVLADGSEYRGDYVDTPAGSLKEFHARRLEILARADGVDMVVFETVPCLAEVRAILS 93
            EEENAKQHQQP+ GS+GR HRRRLRPLVAASLGCYGAVLADGSEYRGDYVDTPAGSLKEFHARRLEILARADGVDMVVFETVPCLAEVRAILS
Sbjct:  139 EEENAKQHQQPVRGSDGRRHRRRLRPLVAASLGCYGAVLADGSEYRGDYVDTPAGSLKEFHARRLEILARADGVDMVVFETVPCLAEVRAILS 231          
BLAST of mRNA_Ecto-sp13_S_contig17863.5435.1 vs. uniprot
Match: A0A6H5KFQ7_9PHAE (Hcy-binding domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KFQ7_9PHAE)

HSP 1 Score: 172 bits (437), Expect = 3.990e-50
Identity = 86/87 (98.85%), Postives = 86/87 (98.85%), Query Frame = 0
Query:    1 EEENAKQHQQPLSGSEGRPHRRRLRPLVAASLGCYGAVLADGSEYRGDYVDTPAGSLKEFHARRLEILARADGVDMVVFETVPCLAE 87
            EEEN KQHQQPLSGSEGRPHRRRLRPLVAASLGCYGAVLADGSEYRGDYVDTPAGSLKEFHARRLEILARADGVDMVVFETVPCLAE
Sbjct:  169 EEENPKQHQQPLSGSEGRPHRRRLRPLVAASLGCYGAVLADGSEYRGDYVDTPAGSLKEFHARRLEILARADGVDMVVFETVPCLAE 255          
BLAST of mRNA_Ecto-sp13_S_contig17863.5435.1 vs. uniprot
Match: I0YMA9_COCSC (Homocysteine S-methyltransferase AtHMT-1 n=1 Tax=Coccomyxa subellipsoidea (strain C-169) TaxID=574566 RepID=I0YMA9_COCSC)

HSP 1 Score: 82.0 bits (201), Expect = 1.090e-16
Identity = 41/71 (57.75%), Postives = 51/71 (71.83%), Query Frame = 0
Query:   22 RRLRPLVAASLGCYGAVLADGSEYRGDYVDTPAGS-LKEFHARRLEILARADGVDMVVFETVPCLAEVRAI 91
            +RLRPLVA S G YGA LADGSEY G Y +  +   L +FH +RL+ +  A GVD++ FETVPCL E+RAI
Sbjct:   91 KRLRPLVAFSAGPYGAALADGSEYDGSYAERVSEEQLMDFHRQRLQAIVGAPGVDLIAFETVPCLKELRAI 161          
BLAST of mRNA_Ecto-sp13_S_contig17863.5435.1 vs. uniprot
Match: A0A433P5G0_9FUNG (Homocysteine S-methyltransferase n=1 Tax=Endogone sp. FLAS-F59071 TaxID=2340872 RepID=A0A433P5G0_9FUNG)

HSP 1 Score: 82.8 bits (203), Expect = 1.190e-16
Identity = 37/68 (54.41%), Postives = 48/68 (70.59%), Query Frame = 0
Query:   24 LRPLVAASLGCYGAVLADGSEYRGDYVDTPAGSLKEFHARRLEILARADGVDMVVFETVPCLAEVRAI 91
            +RPLVA SLGCYGA+LA+GSEY G+Y+D     L +FH +RL +     G+D+V FET+P L E  AI
Sbjct:  164 VRPLVALSLGCYGAMLANGSEYTGEYLDATTEQLVDFHRQRLRVFFAEPGIDLVAFETIPSLQEAEAI 231          
BLAST of mRNA_Ecto-sp13_S_contig17863.5435.1 vs. uniprot
Match: UPI001749A229 (homocysteine S-methyltransferase n=1 Tax=Nocardioides flavus Wang et al. 2016 TaxID=2058780 RepID=UPI001749A229)

HSP 1 Score: 80.9 bits (198), Expect = 3.080e-16
Identity = 42/68 (61.76%), Postives = 50/68 (73.53%), Query Frame = 0
Query:   28 VAASLGCYGAVLADGSEYRGDYVDTPAGSLKEFHARRLEILARA--DGVDMVVFETVPCLAEVRAILS 93
            VAAS+G YGAVLADGSEYRGDY D     L+ FH  RLE+LA    DG D++  ET+PCLAEV A+L+
Sbjct:  110 VAASVGPYGAVLADGSEYRGDY-DLDVAGLRAFHRPRLEVLASTVGDGADVLAVETIPCLAEVEAVLA 176          
BLAST of mRNA_Ecto-sp13_S_contig17863.5435.1 vs. uniprot
Match: A0A835ZJM3_9STRA (Homocysteine S-methyltransferase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZJM3_9STRA)

HSP 1 Score: 80.9 bits (198), Expect = 5.920e-16
Identity = 45/72 (62.50%), Postives = 53/72 (73.61%), Query Frame = 0
Query:   21 RRRLRPLVAASLGCYGAVLADGSEYRGDYVDTPAGSLKEFHARRLEILARADGVDMVVFETVPCLAEVRAIL 92
            RRRLRPLVAAS+G YGA LADGSEY+G+Y  T    L ++H  RL  LA A G D+V  ETVPCLAE RA++
Sbjct:  140 RRRLRPLVAASVGSYGAFLADGSEYKGNYGMT-IEQLMDWHRPRLRALA-ATGADLVACETVPCLAEARALV 209          
BLAST of mRNA_Ecto-sp13_S_contig17863.5435.1 vs. uniprot
Match: A0A7Y9KQW4_9ACTN (Homocysteine S-methyltransferase n=1 Tax=Nocardioides cavernae TaxID=1921566 RepID=A0A7Y9KQW4_9ACTN)

HSP 1 Score: 80.1 bits (196), Expect = 6.360e-16
Identity = 42/68 (61.76%), Postives = 50/68 (73.53%), Query Frame = 0
Query:   28 VAASLGCYGAVLADGSEYRGDYVDTPAGSLKEFHARRLEILARA--DGVDMVVFETVPCLAEVRAILS 93
            VAAS+G YGAVLADGSEYRGDY D     L+ FH  RL++LA    DG D++  ETVPCLAEV A+L+
Sbjct:  114 VAASVGPYGAVLADGSEYRGDY-DLDVAGLRAFHRPRLDVLASTVGDGADVLAVETVPCLAEVEAVLA 180          
BLAST of mRNA_Ecto-sp13_S_contig17863.5435.1 vs. uniprot
Match: A0A835SWU2_CHLIN (Hcy-binding domain-containing protein n=1 Tax=Chlamydomonas incerta TaxID=51695 RepID=A0A835SWU2_CHLIN)

HSP 1 Score: 80.9 bits (198), Expect = 6.570e-16
Identity = 40/72 (55.56%), Postives = 48/72 (66.67%), Query Frame = 0
Query:   23 RLRPLVAASLGCYGAVLADGSEYRGDYVDT-PAGSLKEFHARRLEILARADGVDMVVFETVPCLAEVRAILS 93
            R RPL+A S G YGA LADGSE+RGDY D+ PA  L  FH  RLE +     +D++ FETVPCL E  AI+ 
Sbjct:  155 RRRPLIAYSCGSYGAYLADGSEFRGDYADSVPADELMGFHRTRLEPVRSRPEIDLIAFETVPCLREAEAIVE 226          
BLAST of mRNA_Ecto-sp13_S_contig17863.5435.1 vs. uniprot
Match: A0A7Y3DZB4_9GAMM (Homocysteine S-methyltransferase n=1 Tax=Xanthomonadales bacterium TaxID=2006849 RepID=A0A7Y3DZB4_9GAMM)

HSP 1 Score: 80.1 bits (196), Expect = 7.160e-16
Identity = 40/74 (54.05%), Postives = 53/74 (71.62%), Query Frame = 0
Query:   20 HRRRLRPLVAASLGCYGAVLADGSEYRGDYVDTPAGSLKEFHARRLEILARADGVDMVVFETVPCLAEVRAILS 93
            HRRRLRPLVAAS+G YGA+L DGSEY G+Y D    +L++FH  RL++LA +D  D++ FET+P   E   +L 
Sbjct:  116 HRRRLRPLVAASIGPYGAILHDGSEYHGNY-DLNRRALRDFHRSRLDVLAESDA-DLLAFETIPSQEEAEILLE 187          
BLAST of mRNA_Ecto-sp13_S_contig17863.5435.1 vs. uniprot
Match: A0A8J9SJ70_9CHLO (Homocysteine S-methyltransferase 1 n=1 Tax=Coccomyxa sp. Obi TaxID=2315456 RepID=A0A8J9SJ70_9CHLO)

HSP 1 Score: 79.3 bits (194), Expect = 7.560e-16
Identity = 39/70 (55.71%), Postives = 49/70 (70.00%), Query Frame = 0
Query:   23 RLRPLVAASLGCYGAVLADGSEYRGDYVD-TPAGSLKEFHARRLEILARADGVDMVVFETVPCLAEVRAI 91
            R+RPLVA S G YGA LADGSEY G Y +      L +FH +RL+ +A   G+D++ FETVPCL E+RAI
Sbjct:   85 RVRPLVAFSAGPYGAALADGSEYDGSYAERVTEEQLVDFHRQRLQAIAGQPGIDLIAFETVPCLKELRAI 154          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig17863.5435.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G637_ECTSI8.540e-5295.70Homocysteine S-methyltransferase n=1 Tax=Ectocarpu... [more]
A0A6H5KFQ7_9PHAE3.990e-5098.85Hcy-binding domain-containing protein n=1 Tax=Ecto... [more]
I0YMA9_COCSC1.090e-1657.75Homocysteine S-methyltransferase AtHMT-1 n=1 Tax=C... [more]
A0A433P5G0_9FUNG1.190e-1654.41Homocysteine S-methyltransferase n=1 Tax=Endogone ... [more]
UPI001749A2293.080e-1661.76homocysteine S-methyltransferase n=1 Tax=Nocardioi... [more]
A0A835ZJM3_9STRA5.920e-1662.50Homocysteine S-methyltransferase n=1 Tax=Tribonema... [more]
A0A7Y9KQW4_9ACTN6.360e-1661.76Homocysteine S-methyltransferase n=1 Tax=Nocardioi... [more]
A0A835SWU2_CHLIN6.570e-1655.56Hcy-binding domain-containing protein n=1 Tax=Chla... [more]
A0A7Y3DZB4_9GAMM7.160e-1654.05Homocysteine S-methyltransferase n=1 Tax=Xanthomon... [more]
A0A8J9SJ70_9CHLO7.560e-1655.71Homocysteine S-methyltransferase 1 n=1 Tax=Coccomy... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR003726Homocysteine-binding domainPFAMPF02574S-methyl_transcoord: 26..92
e-value: 1.5E-12
score: 48.0
IPR003726Homocysteine-binding domainPROSITEPS50970HCYcoord: 1..93
score: 12.974
IPR036589Homocysteine-binding domain superfamilyGENE3D3.20.20.330coord: 3..93
e-value: 4.8E-21
score: 77.3
IPR036589Homocysteine-binding domain superfamilySUPERFAMILY82282Homocysteine S-methyltransferasecoord: 22..92
NoneNo IPR availablePANTHERPTHR46015:SF1ZGC:172121coord: 13..92
NoneNo IPR availablePANTHERPTHR46015FAMILY NOT NAMEDcoord: 13..92

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig17863contigEcto-sp13_S_contig17863:3317..3595 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig17863.5435.1mRNA_Ecto-sp13_S_contig17863.5435.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig17863 3315..3595 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig17863.5435.1 ID=prot_Ecto-sp13_S_contig17863.5435.1|Name=mRNA_Ecto-sp13_S_contig17863.5435.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=93bp
EEENAKQHQQPLSGSEGRPHRRRLRPLVAASLGCYGAVLADGSEYRGDYV
DTPAGSLKEFHARRLEILARADGVDMVVFETVPCLAEVRAILS
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR003726HCY_dom
IPR036589HCY_dom_sf