prot_Ecto-sp13_S_contig17863.5434.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig17863.5434.1
Unique Nameprot_Ecto-sp13_S_contig17863.5434.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length205
Homology
BLAST of mRNA_Ecto-sp13_S_contig17863.5434.1 vs. uniprot
Match: A0A6H5KFQ7_9PHAE (Hcy-binding domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KFQ7_9PHAE)

HSP 1 Score: 353 bits (906), Expect = 1.210e-118
Identity = 185/204 (90.69%), Postives = 187/204 (91.67%), Query Frame = 0
Query:    1 DFRSRVSAVISVSCKDDQHLRSGERLQDFADLIWRRAEEQDSTEGQPAVKATTTTTKTRPACVVAVGVNCTSPSHAAGALRTLAAARARPDARHGAPRETPRSRIALVAYPNSGEEWDASARDWVEGTGLREGGAXXXXXXXAEEFGRMARDEWFAAGARVVGGCCRTRPAHVTEIRRALASAAEEGVQEGEGQRRSAWHLEPS 204
            DFR  VSAVISVSCKDDQHLRS ERLQDFADLIWRRAEEQD+TEG PAVKATTTT  TRPACVVAVGVNCTSPSHAAGALRTLAAARARPDARHGAPRETP SRIALVAYPNSGEEWDASARDWVEGTGLREG A       AEEFGRMARDEWFAAGARVVGGCCRTRPAHVTEIRRALASAAEE VQEGEGQ+RSAWH EPS
Sbjct:  256 DFRPSVSAVISVSCKDDQHLRSEERLQDFADLIWRRAEEQDATEGPPAVKATTTTMTTRPACVVAVGVNCTSPSHAAGALRTLAAARARPDARHGAPRETPPSRIALVAYPNSGEEWDASARDWVEGTGLREGRAGGGGG--AEEFGRMARDEWFAAGARVVGGCCRTRPAHVTEIRRALASAAEERVQEGEGQKRSAWHQEPS 457          
BLAST of mRNA_Ecto-sp13_S_contig17863.5434.1 vs. uniprot
Match: D7G637_ECTSI (Homocysteine S-methyltransferase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G637_ECTSI)

HSP 1 Score: 315 bits (806), Expect = 8.660e-104
Identity = 164/204 (80.39%), Postives = 169/204 (82.84%), Query Frame = 0
Query:    1 DFRSRVSAVISVSCKDDQHLRSGERLQDFADLIWRRAEEQDSTEGQPAVKATTTTTKTRPACVVAVGVNCTSPSHAAGALRTLAAARARPDARHGAPRETPRSRIALVAYPNSGEEWDASARDWVEGTGLREGGAXXXXXXXAEEFGRMARDEWFAAGARVVGGCCRTRPAHVTEIRRALASAAEEGVQEGEGQRRSAWHLEPS 204
            DFR RVSAVISVSCKDDQHLRSGERL DFADLIWR AEEQD+ EG             RPACV AVGVNCTSPSHAAG LR LAAARARPDARHGAPRETP SR+ALVAYPNSGEEWDAS RDWVEGTGLR+  A       AEEFGRMARDEWFAAGA VVGGCCRTRPAHV EIRRALASAAEEGVQEGEGQ+R+ WH EPS
Sbjct:  235 DFRPRVSAVISVSCKDDQHLRSGERLHDFADLIWRHAEEQDAAEGPXXXXXXXXXXXXRPACVAAVGVNCTSPSHAAGTLRALAAARARPDARHGAPRETPPSRVALVAYPNSGEEWDASVRDWVEGTGLRDREAGGGGG--AEEFGRMARDEWFAAGATVVGGCCRTRPAHVAEIRRALASAAEEGVQEGEGQQRTGWHQEPS 436          
BLAST of mRNA_Ecto-sp13_S_contig17863.5434.1 vs. uniprot
Match: A0A835ZJM3_9STRA (Homocysteine S-methyltransferase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZJM3_9STRA)

HSP 1 Score: 95.1 bits (235), Expect = 1.490e-19
Identity = 73/184 (39.67%), Postives = 87/184 (47.28%), Query Frame = 0
Query:    4 SRVSAVISVSCKDDQHLRSGERLQDFADLIWRRAEEQDSTEGQPAVKATTTTTKTRPACVVAVGVNCTSPSHAAGALRTL---AAARARP----DARHGAPRETPRSRIALVAYPNSGEEWDASARDWVEGTGLREGGAXXXXXXXAEEFGRMARDEWFAAGARVVGGCCRTRPAHVTEIRRAL 180
            S + A ISVSC D  HL SGE L + A                PAV A     +     V A+GVNCT+P HA  A+R L    AA A P                 +  ++AYPN+GE+WDA+AR WVEGTG             A  FG +A   W AAGA  VGGCCR  P  V  +R AL
Sbjct:  222 SCLYAWISVSCADGAHLASGEALAELA----------------PAVAAADAGGR-----VAALGVNCTAPRHAEAAVRALRAAVAALAEPLPXXXXXXXXXXXXXXXQRLVIAYPNAGEQWDAAARAWVEGTG------------EAHRFGELAA-RWHAAGAAAVGGCCRVGPDAVAAVRAAL 371          
BLAST of mRNA_Ecto-sp13_S_contig17863.5434.1 vs. uniprot
Match: A0A7R9V9F6_9CHLO (Hypothetical protein n=1 Tax=Chlamydomonas euryale TaxID=1486919 RepID=A0A7R9V9F6_9CHLO)

HSP 1 Score: 88.2 bits (217), Expect = 3.670e-19
Identity = 58/123 (47.15%), Postives = 64/123 (52.03%), Query Frame = 0
Query:   63 VVAVGVNCTSPSHAAGALRT-----LAAARARPDARHGAPRETPRSRIALVAYPNSGEEWDASARDWVEGTGLREGGAXXXXXXXAEEFGRMARDEWFAAGARVVGGCCRTRPAHVTEIRRAL 180
            V AVGVNC  P HAA  LR+     LAA          A RE P     L+ YPNSGE WD   R WVE  G+ E             F   AR EW AAGAR+VGGCCRT P H+ E+RR L
Sbjct:   10 VAAVGVNCVDPHHAAPLLRSAGEALLAAC---------ASREPP----VLICYPNSGEGWDKQMRCWVEAPGVSE----------PAPFAAAAR-EWVAAGARMVGGCCRTTPEHIAELRRQL 108          
BLAST of mRNA_Ecto-sp13_S_contig17863.5434.1 vs. uniprot
Match: A0A2M8Q8C7_9CHLR (Homocysteine S-methyltransferase (Fragment) n=1 Tax=Candidatus Thermofonsia Clade 3 bacterium TaxID=2364212 RepID=A0A2M8Q8C7_9CHLR)

HSP 1 Score: 84.0 bits (206), Expect = 4.710e-17
Identity = 49/124 (39.52%), Postives = 62/124 (50.00%), Query Frame = 0
Query:   63 VVAVGVNCTSPSHAAGALRTLAAARARPDARHGAPRETPRSRIALVAYPNSGEEWDASARDWVEGTGLREGGAXXXXXXXAEEFGRMARDEWFAAGARVVGGCCRTRPAHVTEIRRALASAAEE 186
            +VAVGVNCT+P +    L                    P +   L+ YPNSGE WDA AR WVEGTG+              +F   AR  W+AAGAR++GGCCRT PA +  I + L    E+
Sbjct:   52 IVAVGVNCTAPRYVESLLHIA----------------RPLTDKPLLCYPNSGERWDAEARCWVEGTGVT-------------DFAEPAR-RWYAAGARLIGGCCRTTPADIAVIAQTLRQEVEQ 145          
BLAST of mRNA_Ecto-sp13_S_contig17863.5434.1 vs. uniprot
Match: A0A0M8XJA8_9ACTN (Homocysteine methyltransferase n=1 Tax=Nocardiopsis sp. NRRL B-16309 TaxID=1519494 RepID=A0A0M8XJA8_9ACTN)

HSP 1 Score: 84.7 bits (208), Expect = 3.910e-16
Identity = 56/122 (45.90%), Postives = 65/122 (53.28%), Query Frame = 0
Query:   63 VVAVGVNCTSPSHAAGALRTLAAARARPDARHGAPRETPRSRIALVAYPNSGEEWDASARDWVEGTGLREGGAXXXXXXXAEEFGRMARDEWFAAGARVVGGCCRTRPAHVTEIRRALASAA 184
            +VAVG NCT+P      +RT+A A        G P          VAYPNSGE WDA+AR W   TG  E           +EFG  AR  W+ AGA +VGGCCRT P HV  +R  LASAA
Sbjct:  209 LVAVGANCTAPRFVPSLVRTVAEA--------GVP---------AVAYPNSGERWDAAARRW---TGTSE----------PQEFGAAARG-WWEAGAALVGGCCRTGPEHVRSVRAHLASAA 299          
BLAST of mRNA_Ecto-sp13_S_contig17863.5434.1 vs. uniprot
Match: A0A7W5V9U5_9ACTN (Homocysteine S-methyltransferase n=4 Tax=Nonomuraea TaxID=83681 RepID=A0A7W5V9U5_9ACTN)

HSP 1 Score: 84.0 bits (206), Expect = 6.430e-16
Identity = 58/177 (32.77%), Postives = 79/177 (44.63%), Query Frame = 0
Query:    6 VSAVISVSCKDDQHLRSGERLQDFADLIWRRAEEQDSTEGQPAVKATTTTTKTRPACVVAVGVNCTSPSHAAGALRTLAAARARPDARHGAPRETPRSRIALVAYPNSGEEWDASARDWVEGTGLREGGAXXXXXXXAEEFGRMARDEWFAAGARVVGGCCRTRPAHVTEIRRALAS 182
            V A I+ SC+D QHL  G  ++    ++       DS +                  V+AVGVNCTSPS+  G +  L                       +V YPNSGE WDA A+ W    G+ +          A E+G  AR  W   GA ++GGCCRT PAH+  +R A+A+
Sbjct:  169 VKAWIAFSCRDAQHLNDGTPIRQAVSVL------ADSPQ------------------VIAVGVNCTSPSYIPGLITELTG-------------------FTVVVYPNSGETWDAEAQRW---RGVAD----------ATEYGEAAR-RWQEMGAALIGGCCRTTPAHIRRVRAAIAA 288          
BLAST of mRNA_Ecto-sp13_S_contig17863.5434.1 vs. uniprot
Match: A0A1V3BYE2_9ACTN (Homocysteine S-methyltransferase n=4 Tax=Nocardiopsis TaxID=2013 RepID=A0A1V3BYE2_9ACTN)

HSP 1 Score: 83.6 bits (205), Expect = 1.080e-15
Identity = 53/115 (46.09%), Postives = 62/115 (53.91%), Query Frame = 0
Query:   63 VVAVGVNCTSPSHAAGALRTLAAARARPDARHGAPRETPRSRIALVAYPNSGEEWDASARDWVEGTGLREGGAXXXXXXXAEEFGRMARDEWFAAGARVVGGCCRTRPAHVTEIR 177
            +VAVGVNCT+P H    +R +A A        G P          VAYPNSGE WDA+ R W   TG  E           EEFGR A D W+AAGA +VGGCCRT P H+  +R
Sbjct:  212 LVAVGVNCTAPRHVPSLVRAVAGA--------GVP---------AVAYPNSGEVWDAAHRRW---TGTSE----------PEEFGRAAVD-WYAAGAVLVGGCCRTGPEHIRSVR 295          
BLAST of mRNA_Ecto-sp13_S_contig17863.5434.1 vs. uniprot
Match: A0A7C6ZX44_9CHLR (Homocysteine S-methyltransferase n=1 Tax=Chloroflexi bacterium TaxID=2026724 RepID=A0A7C6ZX44_9CHLR)

HSP 1 Score: 83.2 bits (204), Expect = 1.670e-15
Identity = 49/120 (40.83%), Postives = 61/120 (50.83%), Query Frame = 0
Query:   63 VVAVGVNCTSPSHAAGALRTLAAARARPDARHGAPRETPRSRIALVAYPNSGEEWDASARDWVEGTGLREGGAXXXXXXXAEEFGRMARDEWFAAGARVVGGCCRTRPAHVTEIRRALAS 182
            +VAVGVNCT P +    L        +P                L+ YPNSGE WDA+AR WVEGTG+              +F   AR  W+AAGAR++GGCCRT PA +  I  +L S
Sbjct:  223 IVAVGVNCTPPRYIETLLSEARCVTTKP----------------LLCYPNSGERWDATARCWVEGTGVA-------------DFAEPAR-RWYAAGARLIGGCCRTTPADIAAIAHSLRS 312          
BLAST of mRNA_Ecto-sp13_S_contig17863.5434.1 vs. uniprot
Match: I0I4A8_CALAS (Homocysteine S-methyltransferase n=3 Tax=Caldilinea aerophila TaxID=133453 RepID=I0I4A8_CALAS)

HSP 1 Score: 83.2 bits (204), Expect = 1.840e-15
Identity = 49/124 (39.52%), Postives = 63/124 (50.81%), Query Frame = 0
Query:   63 VVAVGVNCTSPSHAAGALRTLAAARARPDARHGAPRETPRSRIALVAYPNSGEEWDASARDWVEGTGLREGGAXXXXXXXAEEFGRMARDEWFAAGARVVGGCCRTRPAHVTEIRRALASAAEE 186
            +VAVGVNCT+P      L+                   P +   L+ YPNSGE WDA AR WVEGTG+              +F   AR  W+AAGAR++GGCCRT PA +  + +AL    E+
Sbjct:  223 IVAVGVNCTAPRFVESLLQIA----------------RPLTDKPLLCYPNSGEAWDAEARCWVEGTGVT-------------DFAEPAR-RWYAAGARLIGGCCRTTPADIAAMAQALRREVEQ 316          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig17863.5434.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KFQ7_9PHAE1.210e-11890.69Hcy-binding domain-containing protein n=1 Tax=Ecto... [more]
D7G637_ECTSI8.660e-10480.39Homocysteine S-methyltransferase n=1 Tax=Ectocarpu... [more]
A0A835ZJM3_9STRA1.490e-1939.67Homocysteine S-methyltransferase n=1 Tax=Tribonema... [more]
A0A7R9V9F6_9CHLO3.670e-1947.15Hypothetical protein n=1 Tax=Chlamydomonas euryale... [more]
A0A2M8Q8C7_9CHLR4.710e-1739.52Homocysteine S-methyltransferase (Fragment) n=1 Ta... [more]
A0A0M8XJA8_9ACTN3.910e-1645.90Homocysteine methyltransferase n=1 Tax=Nocardiopsi... [more]
A0A7W5V9U5_9ACTN6.430e-1632.77Homocysteine S-methyltransferase n=4 Tax=Nonomurae... [more]
A0A1V3BYE2_9ACTN1.080e-1546.09Homocysteine S-methyltransferase n=4 Tax=Nocardiop... [more]
A0A7C6ZX44_9CHLR1.670e-1540.83Homocysteine S-methyltransferase n=1 Tax=Chlorofle... [more]
I0I4A8_CALAS1.840e-1539.52Homocysteine S-methyltransferase n=3 Tax=Caldiline... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR036589Homocysteine-binding domain superfamilyGENE3D3.20.20.330coord: 2..179
e-value: 5.2E-26
score: 93.6
IPR036589Homocysteine-binding domain superfamilySUPERFAMILY82282Homocysteine S-methyltransferasecoord: 6..183
IPR003726Homocysteine-binding domainPFAMPF02574S-methyl_transcoord: 7..179
e-value: 7.3E-22
score: 78.4
IPR003726Homocysteine-binding domainPROSITEPS50970HCYcoord: 1..180
score: 15.59
NoneNo IPR availablePANTHERPTHR46015FAMILY NOT NAMEDcoord: 5..182

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig17863contigEcto-sp13_S_contig17863:1439..2869 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig17863.5434.1mRNA_Ecto-sp13_S_contig17863.5434.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig17863 1439..2869 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig17863.5434.1 ID=prot_Ecto-sp13_S_contig17863.5434.1|Name=mRNA_Ecto-sp13_S_contig17863.5434.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=205bp
DFRSRVSAVISVSCKDDQHLRSGERLQDFADLIWRRAEEQDSTEGQPAVK
ATTTTTKTRPACVVAVGVNCTSPSHAAGALRTLAAARARPDARHGAPRET
PRSRIALVAYPNSGEEWDASARDWVEGTGLREGGAGGGGGGGAEEFGRMA
RDEWFAAGARVVGGCCRTRPAHVTEIRRALASAAEEGVQEGEGQRRSAWH
LEPS*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR036589HCY_dom_sf
IPR003726HCY_dom